MGE detailed information
MGE type: Prophage MGE length: 72201 bp
Accession: NZ_CP045712 Location: 4022291..4094491 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: chromosome
Accession: NZ_CP045712 Location: 4022291..4094491 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHT02_RS19435 () | 4017523..4017858 | - | 336 | WP_000119750.1 | L-valine transporter subunit YgaH | - |
| GHT02_RS19440 () | 4017848..4018585 | - | 738 | WP_000445655.1 | L-valine exporter subunit YgaZ | - |
| GHT02_RS19445 () | 4018709..4019893 | - | 1185 | WP_000165699.1 | MFS transporter | - |
| GHT02_RS19450 () | 4020184..4021176 | - | 993 | WP_001216527.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| GHT02_RS19455 () | 4021234..4022298 | - | 1065 | WP_000774993.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| GHT02_RS19460 () | 4022291..4023493 | - | 1203 | WP_000985494.1 | Glycine betaine/proline betaine transport system ATP-binding protein ProV | VF |
| GHT02_RS19465 () | 4023848..4024807 | - | 960 | WP_000777989.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| GHT02_RS19470 () | 4024817..4026961 | - | 2145 | WP_033885001.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| GHT02_RS19475 () | 4026934..4027344 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| GHT02_RS19480 () | 4027341..4027586 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| GHT02_RS19485 () | 4027834..4028163 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| GHT02_RS19490 () | 4028315..4028659 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| GHT02_RS19495 () | 4028696..4029145 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| GHT02_RS19500 () | 4029813..4030217 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| GHT02_RS19505 () | 4030264..4030788 | - | 525 | WP_001229444.1 | thiosulfate sulfurtransferase YgaP | - |
| GHT02_RS19510 () | 4030798..4031097 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GHT02_RS19515 () | 4031280..4031438 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| GHT02_RS19520 () | 4031522..4031971 | + | 450 | WP_000522424.1 | potassium binding protein Kbp | - |
| GHT02_RS19525 () | 4031972..4032634 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| GHT02_RS19530 () | 4032655..4034055 | - | 1401 | WP_001325764.1 | GABA permease | - |
| GHT02_RS19535 () | 4034366..4035646 | - | 1281 | WP_033885002.1 | 4-aminobutyrate aminotransferase GabT | VF |
| GHT02_RS19540 () | 4035660..4037108 | - | 1449 | WP_000772854.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| GHT02_RS19545 () | 4037131..4038399 | - | 1269 | WP_000271984.1 | L-2-hydroxyglutarate oxidase | - |
| GHT02_RS19550 () | 4038419..4039396 | - | 978 | WP_001315804.1 | carbon starvation induced protein CsiD | - |
| GHT02_RS19555 () | 4039732..4040838 | - | 1107 | Protein_3816 | alpha amylase C-terminal domain-containing protein | - |
| GHT02_RS19560 () | 4040905..4042067 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| GHT02_RS19565 () | 4042219..4043937 | + | 1719 | WP_000577254.1 | ATP-binding protein | - |
| GHT02_RS19570 () | 4043939..4045687 | + | 1749 | WP_000214990.1 | hypothetical protein | - |
| GHT02_RS19575 () | 4045758..4046174 | - | 417 | WP_000448925.1 | hypothetical protein | - |
| GHT02_RS19580 () | 4046213..4047442 | - | 1230 | WP_001341819.1 | Prophage integrase IntA ; Integrase | Integrase |
| GHT02_RS19585 () | 4047768..4048940 | - | 1173 | WP_086218968.1 | Putative defective protein IntQ ; Integrase | Integrase |
| GHT02_RS19590 () | 4048895..4049110 | - | 216 | WP_071827872.1 | excisionase | - |
| GHT02_RS19595 () | 4049266..4049508 | - | 243 | WP_044705933.1 | DUF4222 domain-containing protein | - |
| GHT02_RS19600 () | 4049593..4050294 | - | 702 | WP_044705932.1 | hypothetical protein | - |
| GHT02_RS19605 () | 4050291..4050643 | - | 353 | Protein_3826 | hypothetical protein | - |
| GHT02_RS19610 () | 4050645..4050989 | - | 345 | WP_086218969.1 | ead/Ea22-like family protein | - |
| GHT02_RS19615 () | 4050986..4051441 | - | 456 | WP_086218970.1 | hypothetical protein | - |
| GHT02_RS19620 () | 4051432..4051968 | - | 537 | WP_086218971.1 | 5'-deoxynucleotidase | - |
| GHT02_RS19625 () | 4052096..4052920 | - | 825 | WP_000081284.1 | DUF2303 family protein | - |
| GHT02_RS19630 () | 4052986..4053348 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| GHT02_RS19635 () | 4053363..4053673 | - | 311 | Protein_3832 | hypothetical protein | - |
| GHT02_RS19640 () | 4054033..4054707 | - | 675 | WP_000859463.1 | LexA family transcriptional repressor | - |
| GHT02_RS19645 () | 4054798..4054998 | + | 201 | WP_044705569.1 | helix-turn-helix domain-containing protein | - |
| GHT02_RS19650 () | 4055042..4055593 | + | 552 | WP_044705926.1 | hypothetical protein | - |
| GHT02_RS19655 () | 4055739..4055912 | + | 174 | Protein_3836 | DUF4222 domain-containing protein | - |
| GHT02_RS19660 () | 4055934..4056242 | - | 309 | WP_086218972.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GHT02_RS19665 () | 4056232..4056561 | - | 330 | WP_044706011.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHT02_RS19670 () | 4056586..4057137 | + | 552 | WP_086218973.1 | ash family protein | - |
| GHT02_RS19675 () | 4057130..4057366 | + | 237 | WP_077170670.1 | hypothetical protein | - |
| GHT02_RS19680 () | 4057363..4058193 | + | 831 | WP_086218974.1 | helix-turn-helix domain-containing protein | - |
| GHT02_RS19685 () | 4058190..4058684 | + | 495 | WP_001315196.1 | PerC family transcriptional regulator | - |
| GHT02_RS19690 () | 4058684..4059337 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| GHT02_RS19695 () | 4059334..4059660 | + | 327 | WP_000210169.1 | LexA family transcriptional regulator | - |
| GHT02_RS19700 () | 4059657..4060046 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GHT02_RS19705 () | 4060066..4060908 | + | 843 | WP_001061422.1 | KilA-N domain-containing protein | - |
| GHT02_RS19710 () | 4060916..4061905 | + | 990 | WP_001368056.1 | DUF968 domain-containing protein | - |
| GHT02_RS19715 () | 4061919..4062671 | + | 753 | WP_077170666.1 | antitermination protein | - |
| GHT02_RS19730 () | 4063627..4063962 | - | 336 | WP_044705390.1 | anti-adapter protein IraM | - |
| GHT02_RS19735 () | 4064223..4066199 | + | 1977 | WP_086218976.1 | DUF1737 domain-containing protein | - |
| GHT02_RS19740 () | 4066350..4066532 | + | 183 | WP_001379752.1 | DUF1378 family protein | - |
| GHT02_RS19745 () | 4066558..4066842 | + | 285 | WP_000005635.1 | DUF826 domain-containing protein | - |
| GHT02_RS19750 () | 4066918..4067133 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| GHT02_RS19755 () | 4067137..4067694 | + | 558 | WP_001368066.1 | hypothetical protein | - |
| GHT02_RS19760 () | 4067706..4068020 | - | 315 | WP_000551498.1 | hypothetical protein | - |
| GHT02_RS19765 () | 4068149..4068682 | + | 534 | WP_000992074.1 | lysozyme | - |
| GHT02_RS19770 () | 4068956..4069651 | + | 696 | WP_044705909.1 | phage antirepressor KilAC domain-containing protein | - |
| GHT02_RS19775 () | 4069746..4069877 | + | 132 | WP_001280922.1 | hypothetical protein | - |
| GHT02_RS19780 () | 4070100..4070285 | + | 186 | WP_071830239.1 | Rz1 family lipoprotein | - |
| GHT02_RS19785 () | 4070282..4070374 | + | 93 | WP_033557025.1 | endopeptidase | - |
| GHT02_RS19790 () | 4070371..4070595 | + | 225 | WP_000736383.1 | hypothetical protein | - |
| GHT02_RS19795 () | 4071015..4071491 | + | 477 | WP_000373398.1 | DUF1441 family protein | - |
| GHT02_RS19800 () | 4071488..4073611 | + | 2124 | WP_062867652.1 | phage terminase large subunit family protein | - |
| GHT02_RS19805 () | 4073608..4073820 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| GHT02_RS19810 () | 4073820..4075322 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| GHT02_RS19815 () | 4075312..4077291 | + | 1980 | WP_123129568.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GHT02_RS19820 () | 4077379..4077705 | + | 327 | WP_086218977.1 | DUF2190 family protein | - |
| GHT02_RS19825 () | 4077698..4077979 | + | 282 | WP_001281345.1 | DNA breaking-rejoining protein | - |
| GHT02_RS19830 () | 4077982..4078608 | + | 627 | WP_086218978.1 | phage tail protein | - |
| GHT02_RS19835 () | 4078618..4079016 | + | 399 | WP_086218979.1 | phage tail protein | - |
| GHT02_RS19840 () | 4079024..4079773 | + | 750 | WP_000174602.1 | phage tail protein | - |
| GHT02_RS19845 () | 4079789..4080211 | + | 423 | WP_000479054.1 | phage minor tail protein G | - |
| GHT02_RS19850 () | 4080238..4080546 | + | 309 | WP_000532075.1 | phage tail assembly protein T | - |
| GHT02_RS19855 () | 4080590..4083232 | + | 2643 | WP_203048371.1 | phage tail tape measure protein | - |
| GHT02_RS19860 () | 4083232..4083561 | + | 330 | WP_000847280.1 | phage tail protein | - |
| GHT02_RS19865 () | 4083561..4084259 | + | 699 | WP_001367188.1 | phage minor tail protein L | - |
| GHT02_RS19870 () | 4084270..4085013 | + | 744 | WP_203048374.1 | C40 family peptidase | - |
| GHT02_RS19875 () | 4084959..4085591 | + | 633 | WP_074156316.1 | tail assembly protein | - |
| GHT02_RS19880 () | 4086016..4089483 | + | 3468 | WP_203048377.1 | host specificity protein J | - |
| GHT02_RS19885 () | 4089682..4089822 | + | 141 | WP_000078852.1 | Hok/Gef family protein | - |
| GHT02_RS19890 () | 4089965..4091692 | + | 1728 | WP_203048380.1 | ISNCY family transposase KIS | Transposase |
| GHT02_RS19895 () | 4091734..4092405 | + | 672 | WP_000547693.1 | DUF4376 domain-containing protein | - |
| GHT02_RS19900 () | 4092780..4093931 | + | 1152 | WP_203048383.1 | Adhesin YadA | VF |
| GHT02_RS19905 () | 4094018..4094491 | + | 474 | WP_000864634.1 | hypothetical protein | - |
| GHT02_RS19910 () | 4094704..4094952 | - | 249 | WP_001217531.1 | DinI-like family protein | - |
| GHT02_RS19920 () | 4095792..4096274 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| GHT02_RS19925 () | 4096445..4096882 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| GHT02_RS19930 () | 4096872..4097162 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| GHT02_RS19935 () | 4097224..4097565 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| GHT02_RS19940 () | 4097714..4099375 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|