MGE detailed information
MGE type: Prophage MGE length: 55662 bp
Accession: NZ_CP045701 Location: 4393906..4449567 Organism: Pseudomonas brassicacearum strain S-1 Replicon: chromosome
Accession: NZ_CP045701 Location: 4393906..4449567 Organism: Pseudomonas brassicacearum strain S-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFU70_RS18495 () | 4389187..4389318 | + | 132 | Protein_3664 | IS630 family transposase | - |
| GFU70_RS18500 () | 4389325..4389633 | - | 309 | WP_058542896.1 | hypothetical protein | - |
| GFU70_RS18505 () | 4389678..4390391 | - | 714 | WP_116641704.1 | YafY family transcriptional regulator | - |
| GFU70_RS18510 () | 4390793..4390936 | - | 144 | WP_193034258.1 | hypothetical protein | - |
| GFU70_RS18515 () | 4391354..4391752 | - | 399 | WP_058542915.1 | hypothetical protein | - |
| GFU70_RS18520 () | 4391837..4392118 | - | 282 | WP_058542893.1 | hypothetical protein | - |
| GFU70_RS18525 () | 4392302..4392670 | - | 369 | WP_058542892.1 | hypothetical protein | - |
| GFU70_RS18530 () | 4392819..4393229 | - | 411 | WP_153388577.1 | hypothetical protein | - |
| GFU70_RS18535 () | 4393350..4393799 | - | 450 | WP_058542890.1 | PACE efflux transporter | - |
| GFU70_RS18540 () | 4393906..4394829 | + | 924 | WP_116641702.1 | LysR family transcriptional regulator | - |
| GFU70_RS18545 () | 4394893..4395105 | - | 213 | WP_058542888.1 | hypothetical protein | - |
| GFU70_RS18550 () | 4395441..4395947 | - | 507 | WP_058542887.1 | AAA family ATPase | - |
| GFU70_RS18555 () | 4396285..4396485 | - | 201 | WP_007895617.1 | hypothetical protein | - |
| GFU70_RS18560 () | 4396627..4397073 | + | 447 | WP_193034259.1 | hypothetical protein | - |
| GFU70_RS18565 () | 4397554..4398099 | - | 546 | WP_116641695.1 | DUF4410 domain-containing protein | - |
| GFU70_RS18570 () | 4398262..4398420 | - | 159 | WP_193034322.1 | hypothetical protein | - |
| GFU70_RS18575 () | 4398376..4398597 | + | 222 | WP_153389179.1 | hypothetical protein | - |
| GFU70_RS18580 () | 4398867..4399859 | + | 993 | WP_153388578.1 | hypothetical protein | - |
| GFU70_RS18585 () | 4400052..4400267 | - | 216 | Protein_3682 | tyrosine-type recombinase/integrase | - |
| GFU70_RS18590 () | 4400314..4401858 | - | 1545 | WP_153387853.1 | IS66 family transposase ISPsy5 | Transposase |
| GFU70_RS18595 () | 4401877..4402233 | - | 357 | WP_153389157.1 | IS66 family transposase ISPpu15 | Transposase |
| GFU70_RS18600 () | 4402324..4402647 | - | 324 | Protein_3685 | integrase | - |
| GFU70_RS18605 () | 4402981..4403622 | - | 642 | WP_153388579.1 | hypothetical protein | - |
| GFU70_RS18610 () | 4403619..4404425 | - | 807 | WP_153388580.1 | DUF4276 family protein | - |
| GFU70_RS18615 () | 4405202..4405510 | + | 309 | WP_038858737.1 | putative addiction module antidote protein | - |
| GFU70_RS18620 () | 4405639..4405911 | - | 273 | WP_003203821.1 | hypothetical protein | - |
| GFU70_RS18625 () | 4406580..4406867 | + | 288 | WP_058542883.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GFU70_RS18630 () | 4406880..4407143 | + | 264 | WP_116641690.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GFU70_RS18635 () | 4407530..4407739 | + | 210 | WP_058542881.1 | hypothetical protein | - |
| GFU70_RS18640 () | 4408475..4408990 | - | 516 | WP_153388581.1 | lysis system i-spanin subunit Rz | - |
| GFU70_RS18645 () | 4408987..4409412 | - | 426 | WP_153388582.1 | cell wall hydrolase | - |
| GFU70_RS18650 () | 4409473..4409934 | - | 462 | WP_153388583.1 | hypothetical protein | - |
| GFU70_RS18655 () | 4410633..4410992 | - | 360 | Protein_3696 | tail fiber domain-containing protein | - |
| GFU70_RS18660 () | 4411006..4411680 | - | 675 | WP_153388584.1 | hypothetical protein | - |
| GFU70_RS18665 () | 4411680..4412003 | - | 324 | WP_153388585.1 | hypothetical protein | - |
| GFU70_RS18670 () | 4412000..4415563 | - | 3564 | WP_153388586.1 | phage tail protein | - |
| GFU70_RS18675 () | 4415621..4416181 | - | 561 | WP_193034312.1 | tail assembly protein | - |
| GFU70_RS18680 () | 4416257..4416655 | - | 399 | WP_153388588.1 | DUF2846 domain-containing protein | - |
| GFU70_RS18685 () | 4417060..4417821 | - | 762 | WP_153388589.1 | C40 family peptidase | - |
| GFU70_RS18690 () | 4417824..4418573 | - | 750 | WP_153388590.1 | phage minor tail protein L | - |
| GFU70_RS18695 () | 4418583..4418921 | - | 339 | WP_153388591.1 | phage tail protein | - |
| GFU70_RS18700 () | 4418911..4421796 | - | 2886 | WP_153388592.1 | phage tail tape measure protein | - |
| GFU70_RS18705 () | 4421800..4422111 | - | 312 | WP_153388593.1 | hypothetical protein | - |
| GFU70_RS18710 () | 4422027..4422467 | - | 441 | WP_153388594.1 | phage tail assembly chaperone family protein, TAC | - |
| GFU70_RS18715 () | 4422477..4423205 | - | 729 | WP_193034260.1 | phage tail protein | - |
| GFU70_RS18720 () | 4423291..4423656 | - | 366 | WP_153388595.1 | DUF3168 domain-containing protein | - |
| GFU70_RS18725 () | 4423656..4424099 | - | 444 | WP_193034261.1 | hypothetical protein | - |
| GFU70_RS18730 () | 4424092..4424433 | - | 342 | WP_153388597.1 | phage head closure protein | - |
| GFU70_RS18735 () | 4424433..4424732 | - | 300 | WP_153388598.1 | head-tail connector protein | - |
| GFU70_RS18740 () | 4424733..4424951 | - | 219 | WP_153388599.1 | hypothetical protein | - |
| GFU70_RS18745 () | 4425009..4426211 | - | 1203 | WP_153388600.1 | phage major capsid protein | - |
| GFU70_RS18750 () | 4426208..4426849 | - | 642 | WP_153388601.1 | HK97 family phage prohead protease | - |
| GFU70_RS18755 () | 4426836..4428050 | - | 1215 | WP_153388602.1 | phage portal protein | - |
| GFU70_RS18760 () | 4428053..4429732 | - | 1680 | WP_153388603.1 | terminase large subunit | - |
| GFU70_RS18765 () | 4429736..4430224 | - | 489 | WP_153388604.1 | terminase small subunit | - |
| GFU70_RS18770 () | 4430384..4430725 | - | 342 | WP_153389181.1 | HNH endonuclease | - |
| GFU70_RS18775 () | 4430840..4431172 | - | 333 | WP_153388605.1 | phage holin, lambda family | - |
| GFU70_RS18780 () | 4431548..4431820 | - | 273 | WP_153388606.1 | hypothetical protein | - |
| GFU70_RS18785 () | 4431998..4432561 | - | 564 | WP_153388607.1 | hypothetical protein | - |
| GFU70_RS18790 () | 4432565..4432870 | - | 306 | WP_153389182.1 | hypothetical protein | - |
| GFU70_RS18795 () | 4432870..4434168 | - | 1299 | WP_153388608.1 | hypothetical protein ; Integrase | Integrase |
| GFU70_RS18800 () | 4434165..4434581 | - | 417 | WP_153388609.1 | VRR-NUC domain-containing protein | - |
| GFU70_RS18805 () | 4434578..4434880 | - | 303 | WP_153388610.1 | DUF1364 family protein | - |
| GFU70_RS18810 () | 4434871..4435098 | - | 228 | WP_153388611.1 | DUF3310 domain-containing protein | - |
| GFU70_RS18815 () | 4435098..4435892 | - | 795 | WP_153388612.1 | IS21 family transposase ISMtsp8 | Transposase |
| GFU70_RS18820 () | 4435882..4436802 | - | 921 | WP_153388613.1 | hypothetical protein | - |
| GFU70_RS18825 () | 4437081..4437311 | + | 231 | WP_153388614.1 | hypothetical protein | - |
| GFU70_RS18830 () | 4437507..4437737 | - | 231 | WP_153388615.1 | helix-turn-helix domain-containing protein | - |
| GFU70_RS18835 () | 4437883..4438581 | + | 699 | WP_153389183.1 | helix-turn-helix transcriptional regulator | - |
| GFU70_RS18840 () | 4438956..4439261 | + | 306 | WP_153388616.1 | helix-turn-helix transcriptional regulator | - |
| GFU70_RS18845 () | 4439338..4439775 | + | 438 | WP_153388617.1 | tellurite resistance TerB family protein | - |
| GFU70_RS18850 () | 4440647..4440931 | + | 285 | WP_153388618.1 | hypothetical protein | - |
| GFU70_RS18855 () | 4440928..4441242 | + | 315 | WP_153388619.1 | hypothetical protein | - |
| GFU70_RS18860 () | 4441324..4441704 | + | 381 | WP_153388620.1 | hypothetical protein | - |
| GFU70_RS18865 () | 4442026..4442229 | - | 204 | WP_153388621.1 | hypothetical protein | - |
| GFU70_RS18870 () | 4442326..4442514 | - | 189 | WP_153388622.1 | hypothetical protein | - |
| GFU70_RS18875 () | 4442592..4444397 | + | 1806 | WP_153388623.1 | DNA cytosine methyltransferase | - |
| GFU70_RS18880 () | 4444441..4445082 | + | 642 | WP_153388624.1 | hypothetical protein | - |
| GFU70_RS18885 () | 4445079..4445393 | + | 315 | WP_153388625.1 | DUF4406 domain-containing protein | - |
| GFU70_RS18890 () | 4445448..4445831 | - | 384 | WP_153388626.1 | hypothetical protein | - |
| GFU70_RS18895 () | 4445828..4446130 | - | 303 | WP_153388627.1 | hypothetical protein | - |
| GFU70_RS18900 () | 4446635..4446904 | + | 270 | WP_153389184.1 | hypothetical protein | - |
| GFU70_RS18905 () | 4446954..4447376 | + | 423 | WP_153388628.1 | hypothetical protein | - |
| GFU70_RS18910 () | 4447425..4447802 | + | 378 | Protein_3747 | hypothetical protein | - |
| GFU70_RS18915 () | 4447955..4448161 | + | 207 | WP_153388629.1 | hypothetical protein | - |
| GFU70_RS18920 () | 4448198..4448431 | + | 234 | WP_055135598.1 | hypothetical protein | - |
| GFU70_RS18925 () | 4448431..4449567 | + | 1137 | WP_153388630.1 | hypothetical protein ; Integrase | Integrase |
| GFU70_RS18935 () | 4449937..4451220 | + | 1284 | WP_153388631.1 | FAD-binding oxidoreductase | - |
| GFU70_RS18955 () | 4451891..4452664 | - | 774 | WP_058545772.1 | SDR family oxidoreductase | - |
| GFU70_RS18960 () | 4452661..4453872 | - | 1212 | WP_058545771.1 | O-succinylhomoserine sulfhydrylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|