MGE detailed information
MGE type: Genomic_island MGE length: 20653 bp
Accession: NZ_CP045701 Location: 407956..428608 Organism: Pseudomonas brassicacearum strain S-1 Replicon: chromosome
Accession: NZ_CP045701 Location: 407956..428608 Organism: Pseudomonas brassicacearum strain S-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFU70_RS01730 () | 404203..404949 | + | 747 | WP_058544977.1 | 2OG-Fe dioxygenase family protein | - |
| GFU70_RS01735 () | 404963..405400 | + | 438 | WP_175360550.1 | GNAT family N-acetyltransferase | - |
| GFU70_RS01740 () | 405397..406110 | + | 714 | WP_003196767.1 | AzlC family ABC transporter permease | - |
| GFU70_RS01745 () | 406089..406406 | + | 318 | WP_058544978.1 | AzlD domain-containing protein | - |
| GFU70_RS01750 () | 406323..407249 | - | 927 | WP_058544979.1 | LysR family transcriptional regulator | - |
| GFU70_RS01755 () | 407700..407990 | + | 291 | WP_041475661.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| GFU70_RS01760 () | 407956..408270 | + | 315 | WP_058544980.1 | type II toxin-antitoxin system YafQ family toxin | - |
| GFU70_RS01765 () | 408367..408777 | + | 411 | WP_003196771.1 | MbcA/ParS/Xre antitoxin family protein | - |
| GFU70_RS01770 () | 408777..409454 | + | 678 | WP_153387509.1 | RES family NAD+ phosphorylase | - |
| GFU70_RS01775 () | 409593..411200 | - | 1608 | WP_153387510.1 | Methyl-accepting chemotaxis protein PctC | VF |
| GFU70_RS01780 () | 411430..411708 | - | 279 | WP_057449173.1 | DUF3077 domain-containing protein | - |
| GFU70_RS01785 () | 412184..412393 | + | 210 | WP_193034272.1 | hypothetical protein | - |
| GFU70_RS01790 () | 412843..413631 | - | 789 | WP_153387511.1 | SIR2 family protein | - |
| GFU70_RS01795 () | 413631..414185 | - | 555 | WP_112196100.1 | non-canonical purine NTP pyrophosphatase | - |
| GFU70_RS01800 () | 414175..415158 | - | 984 | WP_153387512.1 | adenosine deaminase | - |
| GFU70_RS01805 () | 415412..416554 | - | 1143 | WP_112196101.1 | beta family protein | - |
| GFU70_RS01810 () | 416551..417771 | - | 1221 | WP_153379197.1 | ImmA/IrrE family metallo-endopeptidase | - |
| GFU70_RS01815 () | 417761..418039 | - | 279 | WP_058418254.1 | type II toxin-antitoxin system HigB family toxin | - |
| GFU70_RS01820 () | 418533..419335 | - | 803 | Protein_356 | integrase domain-containing protein | - |
| GFU70_RS01825 () | 420230..420559 | - | 330 | WP_153387513.1 | hypothetical protein | - |
| GFU70_RS01830 () | 420592..421581 | - | 990 | WP_153387514.1 | Abi family protein | - |
| GFU70_RS01840 () | 422002..422826 | - | 825 | WP_153387515.1 | FkbM family methyltransferase | - |
| GFU70_RS01845 () | 423158..424390 | - | 1233 | WP_153387516.1 | methyltransferase | - |
| GFU70_RS01850 () | 424371..425060 | - | 690 | WP_116643371.1 | ABC transporter permease | - |
| GFU70_RS01855 () | 425057..425752 | - | 696 | WP_064106967.1 | ABC transporter permease | - |
| GFU70_RS01860 () | 425831..426598 | - | 768 | WP_058546212.1 | ABC transporter substrate-binding protein | - |
| GFU70_RS01865 () | 426612..427385 | - | 774 | WP_003196795.1 | Octopine permease ATP-binding protein P | VF |
| GFU70_RS01870 () | 427959..428378 | - | 420 | WP_058546213.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| GFU70_RS01875 () | 428378..428608 | - | 231 | WP_058546214.1 | antitoxin | Antitoxin Detail |
| GFU70_RS01880 () | 428793..429242 | + | 450 | WP_153387517.1 | carboxypeptidase-like regulatory domain-containing protein | - |
| GFU70_RS01885 () | 429252..429698 | - | 447 | WP_116643368.1 | hypothetical protein | - |
| GFU70_RS01890 () | 429739..431973 | - | 2235 | WP_153387518.1 | GAF domain-containing protein | - |
| GFU70_RS01895 () | 431970..432575 | - | 606 | WP_153387519.1 | biliverdin-producing heme oxygenase | - |
| GFU70_RS01900 () | 432670..433320 | - | 651 | WP_153387520.1 | DUF1016 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|