MGE detailed information
MGE type: Genomic_island MGE length: 35417 bp
Accession: NZ_CP045646 Location: 1008618..1044034 Organism: Bifidobacterium breve strain JSRL01 Replicon: chromosome
Accession: NZ_CP045646 Location: 1008618..1044034 Organism: Bifidobacterium breve strain JSRL01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFJ40_RS04180 () | 1003849..1004697 | - | 849 | WP_042994118.1 | transporter substrate-binding domain-containing protein | - |
| GFJ40_RS04185 () | 1004767..1005510 | - | 744 | WP_171842473.1 | ATP-binding cassette domain-containing protein | - |
| GFJ40_RS04190 () | 1005548..1006255 | - | 708 | WP_003829075.1 | amino acid ABC transporter permease | - |
| GFJ40_RS04195 () | 1006233..1006895 | - | 663 | WP_014483851.1 | amino acid ABC transporter permease | - |
| GFJ40_RS04200 () | 1007337..1008437 | + | 1101 | WP_042994117.1 | redox-regulated ATPase YchF | - |
| GFJ40_RS04205 () | 1008618..1009478 | - | 861 | WP_003833466.1 | HTH-type transcriptional activator RhaS | VF |
| GFJ40_RS04210 () | 1009505..1009762 | - | 258 | WP_048349503.1 | TfoX/Sxy family protein | - |
| GFJ40_RS09745 () | 1009916..1010124 | + | 209 | Protein_811 | hypothetical protein | - |
| GFJ40_RS04215 () | 1010150..1011532 | + | 1383 | WP_003829089.1 | MATE family efflux transporter | - |
| GFJ40_RS04220 () | 1011537..1013780 | + | 2244 | WP_003829091.1 | excinuclease ABC subunit UvrA | - |
| GFJ40_RS04225 () | 1013876..1014174 | - | 299 | Protein_814 | IS256 family transposase ISBlo17 | Transposase |
| GFJ40_RS04230 () | 1014645..1015910 | - | 1266 | WP_014483848.1 | Fic family protein | - |
| GFJ40_RS04235 () | 1016452..1016817 | - | 366 | WP_013140585.1 | YccF domain-containing protein | - |
| GFJ40_RS04240 () | 1017055..1017924 | + | 870 | WP_003829104.1 | class I SAM-dependent methyltransferase | - |
| GFJ40_RS04245 () | 1018018..1018632 | + | 615 | WP_014483846.1 | cupin domain-containing protein | - |
| GFJ40_RS04250 () | 1018849..1019172 | - | 324 | WP_003829109.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| GFJ40_RS04255 () | 1019159..1019404 | - | 246 | WP_003829112.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GFJ40_RS04260 () | 1019578..1020834 | + | 1257 | WP_016463167.1 | HipA domain-containing protein | - |
| GFJ40_RS04265 () | 1021099..1021290 | + | 192 | WP_003829118.1 | hypothetical protein | - |
| GFJ40_RS04270 () | 1021474..1022745 | - | 1272 | WP_042994115.1 | MFS transporter | - |
| GFJ40_RS04275 () | 1022902..1023564 | - | 663 | WP_042994114.1 | hypothetical protein | VF |
| GFJ40_RS04285 () | 1024443..1026494 | + | 2052 | WP_095256947.1 | DHA2 family efflux MFS transporter permease subunit | - |
| GFJ40_RS04290 () | 1026588..1026784 | + | 197 | Protein_826 | MFS transporter | - |
| GFJ40_RS04295 () | 1026854..1028467 | + | 1614 | Protein_827 | glycogen/starch/alpha-glucan family phosphorylase | - |
| GFJ40_RS04300 () | 1028730..1029974 | - | 1245 | WP_003829137.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| GFJ40_RS04305 () | 1030068..1030880 | - | 813 | WP_003829139.1 | glucosamine-6-phosphate deaminase | - |
| GFJ40_RS04310 () | 1030966..1031940 | - | 975 | WP_003829141.1 | ROK family protein | - |
| GFJ40_RS04315 () | 1031996..1033180 | - | 1185 | WP_003829142.1 | ROK family protein | - |
| GFJ40_RS04320 () | 1033499..1034338 | + | 840 | WP_025262928.1 | D-hexose-6-phosphate mutarotase | - |
| GFJ40_RS04325 () | 1034591..1036018 | + | 1428 | WP_003833166.1 | sugar porter family MFS transporter | - |
| GFJ40_RS04330 () | 1036108..1037634 | + | 1527 | WP_003829148.1 | sulfatase-like hydrolase/transferase | - |
| GFJ40_RS04335 () | 1037757..1039100 | + | 1344 | WP_042994113.1 | anaerobic sulfatase maturase | - |
| GFJ40_RS04340 () | 1039149..1039949 | + | 801 | WP_003829152.1 | sulfite exporter TauE/SafE family protein | - |
| GFJ40_RS04345 () | 1040062..1040388 | + | 327 | Protein_837 | IS3 family transposase ISBad2 | Transposase |
| GFJ40_RS04350 () | 1040409..1040999 | + | 591 | WP_095256937.1 | sulfite exporter TauE/SafE family protein | - |
| GFJ40_RS04355 () | 1041139..1041501 | - | 363 | WP_015438725.1 | VOC family protein | - |
| GFJ40_RS04360 () | 1041635..1041814 | - | 180 | Protein_840 | hypothetical protein | - |
| GFJ40_RS04365 () | 1041963..1043333 | + | 1371 | WP_003829157.1 | MFS transporter | - |
| GFJ40_RS04370 () | 1043453..1044034 | + | 582 | WP_003829159.1 | haloacid dehalogenase-like hydrolase | - |
| GFJ40_RS04375 () | 1044085..1044915 | + | 831 | WP_025332215.1 | histidine phosphatase family protein | - |
| GFJ40_RS04380 () | 1045023..1046312 | + | 1290 | WP_025332216.1 | NCS2 family nucleobase:cation symporter | - |
| GFJ40_RS04385 () | 1046685..1048712 | + | 2028 | WP_025262933.1 | DEAD/DEAH box helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|