MGE detailed information
MGE type: Prophage MGE length: 25218 bp
Accession: NZ_CP045553 Location: 3960880..3986097 Organism: Pseudomonas sp. 13159349 Replicon: chromosome
Accession: NZ_CP045553 Location: 3960880..3986097 Organism: Pseudomonas sp. 13159349 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEV38_RS18330 () | 3955889..3957742 | + | 1854 | WP_013973388.1 | NADH-quinone oxidoreductase subunit L | - |
| GEV38_RS18335 () | 3957792..3959324 | + | 1533 | WP_015271056.1 | NADH-quinone oxidoreductase subunit M | - |
| GEV38_RS18340 () | 3959332..3960801 | + | 1470 | WP_013973390.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| GEV38_RS18345 () | 3960880..3961143 | - | 264 | WP_023662582.1 | ogr/Delta-like zinc finger family protein | - |
| GEV38_RS18350 () | 3961344..3961736 | + | 393 | WP_003261013.1 | helix-turn-helix domain-containing protein | - |
| GEV38_RS18355 () | 3961733..3962094 | - | 362 | Protein_3597 | hypothetical protein | - |
| GEV38_RS18360 () | 3962087..3962434 | - | 348 | WP_015271058.1 | head completion/stabilization protein | - |
| GEV38_RS18365 () | 3962446..3962694 | - | 249 | WP_003261017.1 | Transcriptional activator protein LasR | VF |
| GEV38_RS18370 () | 3962915..3964981 | + | 2067 | WP_054572489.1 | TonB-dependent receptor | - |
| GEV38_RS18375 () | 3965154..3965714 | - | 561 | WP_054572488.1 | NAD(P)H-dependent oxidoreductase | - |
| GEV38_RS18380 () | 3965872..3966090 | + | 219 | WP_015271061.1 | hypothetical protein | - |
| GEV38_RS18385 () | 3966074..3968323 | - | 2250 | WP_015271062.1 | lysine decarboxylase | - |
| GEV38_RS18390 () | 3968590..3969348 | - | 759 | WP_054572487.1 | DNA polymerase III subunit epsilon | - |
| GEV38_RS18395 () | 3969400..3969846 | - | 447 | WP_054572486.1 | ribonuclease HI | - |
| GEV38_RS18400 () | 3969860..3970633 | - | 774 | WP_013973399.1 | methyltransferase domain-containing protein | - |
| GEV38_RS18405 () | 3970719..3971498 | + | 780 | WP_054572485.1 | hydroxyacylglutathione hydrolase | - |
| GEV38_RS18410 () | 3971599..3973029 | + | 1431 | WP_015271065.1 | Membrane-bound lytic murein transglycosylase D | VF |
| GEV38_RS18415 () | 3973366..3975138 | + | 1773 | WP_013973402.1 | extracellular solute-binding protein | - |
| GEV38_RS18420 () | 3975135..3976970 | + | 1836 | WP_039613094.1 | extracellular solute-binding protein | - |
| GEV38_RS18425 () | 3976972..3978045 | + | 1074 | WP_009686399.1 | microcin C ABC transporter permease YejB | - |
| GEV38_RS18430 () | 3978047..3979066 | + | 1020 | WP_013973404.1 | ABC transporter permease | - |
| GEV38_RS18435 () | 3979068..3980678 | + | 1611 | WP_054572484.1 | putative ABC transporter ATP-binding protein YejF | VF |
| GEV38_RS18440 () | 3981069..3981311 | + | 243 | WP_054572483.1 | hypothetical protein | - |
| GEV38_RS18445 () | 3981468..3981731 | + | 264 | WP_015271070.1 | DUF3077 domain-containing protein | - |
| GEV38_RS18450 () | 3981913..3982380 | + | 468 | WP_015271071.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GEV38_RS18455 () | 3982377..3982952 | + | 576 | WP_015271072.1 | PIN domain-containing protein | Toxin Detail |
| GEV38_RS18460 () | 3983167..3986097 | + | 2931 | WP_015271073.1 | aminotransferase | - |
| GEV38_RS18465 () | 3986461..3987366 | + | 906 | WP_013973410.1 | LysR family transcriptional regulator | - |
| GEV38_RS18470 () | 3987489..3988448 | + | 960 | WP_015271074.1 | hypothetical protein | - |
| GEV38_RS18475 () | 3988445..3989695 | + | 1251 | WP_173895911.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|