MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89698 bp
Accession: NZ_CP045552 Location: 5543429..5633126 Organism: Pseudomonas aeruginosa strain YT12746 Replicon: chromosome
Accession: NZ_CP045552 Location: 5543429..5633126 Organism: Pseudomonas aeruginosa strain YT12746 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEV42_RS26270 () | 5539002..5543200 | + | 4199 | Protein_5194 | two-partner secretion system exoprotein TpsA4 | - |
| GEV42_RS26275 () | 5543570..5544436 | + | 867 | WP_003111785.1 | ParA family protein | - |
| GEV42_RS26280 () | 5544438..5545175 | + | 738 | WP_003111784.1 | hypothetical protein | - |
| GEV42_RS26285 () | 5545172..5545669 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| GEV42_RS26290 () | 5545675..5546376 | + | 702 | WP_023443554.1 | DUF2786 domain-containing protein | - |
| GEV42_RS26295 () | 5546373..5547101 | + | 729 | WP_003111781.1 | HNH endonuclease | - |
| GEV42_RS26300 () | 5547085..5547309 | + | 225 | WP_003111780.1 | hypothetical protein | - |
| GEV42_RS26305 () | 5547306..5548649 | + | 1344 | WP_010792218.1 | replicative DNA helicase | - |
| GEV42_RS26310 () | 5549088..5549534 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| GEV42_RS26315 () | 5549718..5550677 | + | 960 | WP_023082651.1 | hypothetical protein | - |
| GEV42_RS26320 () | 5551084..5551269 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| GEV42_RS26325 () | 5551259..5551786 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| GEV42_RS26330 () | 5551783..5552040 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| GEV42_RS26335 () | 5552033..5552272 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| GEV42_RS26340 () | 5552265..5552498 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| GEV42_RS26345 () | 5552498..5553520 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| GEV42_RS26350 () | 5553517..5554407 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| GEV42_RS26355 () | 5554428..5554697 | + | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| GEV42_RS26360 () | 5554694..5556427 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| GEV42_RS26365 () | 5556455..5557210 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| GEV42_RS26370 () | 5557213..5558538 | + | 1326 | WP_031675614.1 | hypothetical protein | - |
| GEV42_RS26375 () | 5559762..5560397 | + | 636 | WP_079866755.1 | hypothetical protein | - |
| GEV42_RS26380 () | 5560663..5561391 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| GEV42_RS26385 () | 5561397..5561945 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| GEV42_RS26390 () | 5561993..5562823 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| GEV42_RS26395 () | 5562853..5563311 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| GEV42_RS26400 () | 5563417..5563611 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| GEV42_RS26405 () | 5563856..5564023 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| GEV42_RS26410 () | 5564139..5566058 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| GEV42_RS26415 () | 5566365..5566574 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| GEV42_RS26420 () | 5566796..5568685 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| GEV42_RS26425 () | 5568682..5570658 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| GEV42_RS26430 () | 5570799..5571143 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| GEV42_RS26435 () | 5571214..5571504 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| GEV42_RS26440 () | 5571501..5571800 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GEV42_RS26445 () | 5572002..5573126 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| GEV42_RS26450 () | 5573126..5574835 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| GEV42_RS26455 () | 5574839..5576164 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| GEV42_RS26460 () | 5576154..5576687 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| GEV42_RS26465 () | 5576696..5578276 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| GEV42_RS26470 () | 5578276..5579355 | + | 1080 | WP_003099764.1 | hypothetical protein | VF |
| GEV42_RS26475 () | 5579377..5579907 | + | 531 | WP_003120996.1 | pilus assembly protein PilX | - |
| GEV42_RS26480 () | 5579904..5580860 | + | 957 | WP_003448639.1 | hypothetical protein | VF |
| GEV42_RS26485 () | 5580853..5582232 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| GEV42_RS26490 () | 5582250..5582687 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| GEV42_RS26495 () | 5583609..5584175 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| GEV42_RS26500 () | 5584252..5584431 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| GEV42_RS26505 () | 5584890..5585378 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| GEV42_RS26510 () | 5585516..5585674 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| GEV42_RS26515 () | 5585748..5585945 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| GEV42_RS26520 () | 5586137..5586850 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| GEV42_RS26525 () | 5587086..5587436 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| GEV42_RS26530 () | 5587493..5588125 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| GEV42_RS26535 () | 5588122..5588397 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| GEV42_RS26540 () | 5588467..5588829 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| GEV42_RS26545 () | 5588897..5589157 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| GEV42_RS26550 () | 5589250..5589855 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| GEV42_RS26555 () | 5589885..5591330 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| GEV42_RS26560 () | 5591435..5593684 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| GEV42_RS26565 () | 5594005..5594259 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| GEV42_RS26570 () | 5594900..5595097 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| GEV42_RS26575 () | 5595315..5596013 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| GEV42_RS26580 () | 5596024..5596779 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| GEV42_RS26585 () | 5596764..5597345 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| GEV42_RS26590 () | 5597342..5597842 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| GEV42_RS26595 () | 5597914..5598120 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| GEV42_RS26600 () | 5598124..5600355 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| GEV42_RS26605 () | 5600355..5601101 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| GEV42_RS26610 () | 5601119..5601610 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| GEV42_RS26615 () | 5601852..5603333 | + | 1482 | WP_023082057.1 | UvrD-helicase domain-containing protein | - |
| GEV42_RS26620 () | 5603464..5604573 | + | 1110 | WP_023082058.1 | hypothetical protein | - |
| GEV42_RS26625 () | 5604618..5604929 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| GEV42_RS26630 () | 5605092..5605562 | - | 471 | Protein_5266 | IS5 family transposase ISPpu21 | Transposase |
| GEV42_RS26635 () | 5605622..5606890 | - | 1269 | WP_010562502.1 | group II intron reverse transcriptase/maturase | - |
| GEV42_RS26640 () | 5607410..5607922 | - | 513 | Protein_5268 | IS5 family transposase ISPpu21 | Transposase |
| GEV42_RS26645 () | 5608147..5608446 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| GEV42_RS26650 () | 5608539..5608877 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| GEV42_RS26655 () | 5608874..5609113 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| GEV42_RS26660 () | 5609131..5609487 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| GEV42_RS26665 () | 5609498..5609884 | + | 387 | WP_003109399.1 | TIGR03750 family conjugal transfer protein | - |
| GEV42_RS26670 () | 5609881..5610540 | + | 660 | WP_003109400.1 | TIGR03746 family integrating conjugative element protein | - |
| GEV42_RS26675 () | 5610537..5611421 | + | 885 | WP_003109401.1 | TIGR03749 family integrating conjugative element protein | - |
| GEV42_RS26680 () | 5611405..5612910 | + | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
| GEV42_RS26685 () | 5612888..5613331 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| GEV42_RS26690 () | 5613331..5616273 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| GEV42_RS26695 () | 5616270..5616554 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| GEV42_RS26700 () | 5616551..5617210 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| GEV42_RS26705 () | 5617207..5617425 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| GEV42_RS26710 () | 5617510..5618490 | + | 981 | WP_019437692.1 | IS5 family transposase ISPpu21 | Transposase |
| GEV42_RS26715 () | 5620762..5621193 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| GEV42_RS26720 () | 5621193..5622131 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| GEV42_RS26725 () | 5622149..5623531 | + | 1383 | WP_121378534.1 | integrating conjugative element protein | - |
| GEV42_RS26730 () | 5623531..5623878 | + | 348 | WP_012076881.1 | hypothetical protein | - |
| GEV42_RS26735 () | 5623875..5625386 | + | 1512 | WP_019484419.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GEV42_RS26740 () | 5625424..5625774 | - | 351 | WP_071535247.1 | hypothetical protein | - |
| GEV42_RS26745 () | 5625893..5626165 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GEV42_RS26750 () | 5626169..5626522 | + | 354 | WP_050153191.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GEV42_RS26755 () | 5626549..5627463 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| GEV42_RS26760 () | 5627489..5627728 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| GEV42_RS26765 () | 5628112..5629362 | + | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| GEV42_RS26770 () | 5629522..5631444 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| GEV42_RS26775 () | 5631441..5632742 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GEV42_RS26795 () | 5633561..5636125 | - | 2565 | WP_034040524.1 | ATP-dependent chaperone ClpB | - |
| GEV42_RS26800 () | 5636281..5637009 | - | 729 | WP_034040521.1 | peptidoglycan editing factor PgeF | - |
| GEV42_RS26805 () | 5637006..5637968 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|