MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP045524 Location: 2386799..2399773 Organism: Shigella sonnei strain 6904.27 Replicon: chromosome
Accession: NZ_CP045524 Location: 2386799..2399773 Organism: Shigella sonnei strain 6904.27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE168_RS12175 (2381957) | 2381957..2383012 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| GE168_RS12180 (2383083) | 2383083..2383868 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| GE168_RS12185 (2383840) | 2383840..2385552 | + | 1713 | Protein_2386 | flagellar biosynthesis protein FlhA | - |
| GE168_RS12190 (2385675) | 2385675..2386172 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| GE168_RS12195 (2386243) | 2386243..2386371 | - | 129 | Protein_2388 | ISAs1 family transposase | - |
| GE168_RS12200 (2386426) | 2386426..2387123 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| GE168_RS12205 (2387412) | 2387412..2388185 | - | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| GE168_RS12210 (2388371) | 2388371..2388631 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| GE168_RS12215 (2388634) | 2388634..2388912 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| GE168_RS12220 (2389068) | 2389068..2389808 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| GE168_RS12225 (2389779) | 2389779..2390546 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| GE168_RS12230 (2390752) | 2390752..2391330 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| GE168_RS12235 (2391570) | 2391570..2394014 | + | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| GE168_RS12240 (2394057) | 2394057..2394503 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| GE168_RS12245 (2394684) | 2394684..2395454 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| GE168_RS12250 (2395496) | 2395496..2396632 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| GE168_RS12255 (2397101) | 2397101..2397478 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| GE168_RS12260 (2397478) | 2397478..2397795 | - | 318 | WP_001163457.1 | hypothetical protein | - |
| GE168_RS12265 (2397926) | 2397926..2399062 | - | 1137 | Protein_2402 | ISAs1 family transposase ISEc1 | Transposase |
| GE168_RS12270 (2399324) | 2399324..2399773 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| GE168_RS12275 (2399785) | 2399785..2403993 | - | 4209 | WP_112367442.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|