MGE detailed information
MGE type: Conjugative plasmid MGE length: 140849 bp
Accession: NZ_CP045495 Location: 1..140849 Organism: Mesorhizobium sp. NBSH29 Replicon: plasmid unnamed3
Accession: NZ_CP045495 Location: 1..140849 Organism: Mesorhizobium sp. NBSH29 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA830_RS19115 () | 1..1444 | + | 1444 | WP_195165209.1 | efflux RND transporter permease subunit | - |
| GA830_RS19120 () | 1633..1965 | - | 333 | WP_195165061.1 | four-helix bundle copper-binding protein | - |
| GA830_RS19125 () | 2014..2364 | - | 351 | WP_195165127.1 | DUF305 domain-containing protein | - |
| GA830_RS19130 () | 3314..3838 | + | 525 | WP_195164712.1 | IS5 family transposase | - |
| GA830_RS19135 () | 3975..4637 | - | 663 | WP_195165210.1 | transmembrane anchor protein | - |
| GA830_RS19140 () | 4655..5389 | - | 735 | WP_195165211.1 | HupE/UreJ family protein | - |
| GA830_RS19145 () | 5446..5799 | - | 354 | WP_195165212.1 | hypothetical protein | - |
| GA830_RS19150 () | 5898..6173 | + | 276 | WP_195165213.1 | metal-sensing transcriptional repressor | - |
| GA830_RS19155 () | 6173..7492 | + | 1320 | WP_195165214.1 | MFS transporter | - |
| GA830_RS19160 () | 7522..7962 | + | 441 | WP_195165215.1 | DedA family protein | - |
| GA830_RS19165 () | 7968..8684 | + | 717 | WP_195165282.1 | ABC transporter permease | - |
| GA830_RS19170 () | 8778..9056 | + | 279 | WP_195165216.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| GA830_RS19175 () | 9053..10015 | + | 963 | WP_195165217.1 | CDF family Co(II)/Ni(II) efflux transporter DmeF | - |
| GA830_RS19180 () | 10128..10526 | + | 399 | WP_195165218.1 | Cu(I)-responsive transcriptional regulator | - |
| GA830_RS19185 () | 10523..11080 | + | 558 | WP_195165219.1 | cytochrome c | - |
| GA830_RS19190 () | 11083..13041 | + | 1959 | WP_195165283.1 | multicopper oxidase domain-containing protein | - |
| GA830_RS19195 () | 13038..14049 | + | 1012 | Protein_16 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| GA830_RS19200 () | 14046..14786 | + | 741 | WP_195165220.1 | Pyridoxine 5'-phosphate synthase | VF |
| GA830_RS19205 () | 14762..15115 | - | 354 | WP_195165221.1 | hypothetical protein | - |
| GA830_RS19210 () | 15189..15668 | + | 480 | WP_195165222.1 | hypothetical protein | - |
| GA830_RS19215 () | 15754..15984 | + | 231 | WP_195165223.1 | hypothetical protein | - |
| GA830_RS19220 () | 15981..17453 | + | 1473 | WP_195165224.1 | TolC family protein | - |
| GA830_RS19225 () | 17472..18833 | + | 1362 | WP_195165225.1 | copper oxidase | - |
| GA830_RS19230 () | 18871..19356 | + | 486 | WP_195165226.1 | cupredoxin family protein | - |
| GA830_RS19235 () | 19384..19665 | + | 282 | WP_195165227.1 | copper-binding protein | - |
| GA830_RS19240 () | 19721..21085 | + | 1365 | WP_195165228.1 | adenylate/guanylate cyclase domain-containing protein | - |
| GA830_RS19245 () | 21119..21557 | + | 439 | Protein_26 | DUF411 domain-containing protein | - |
| GA830_RS19250 () | 22175..22357 | + | 183 | WP_195165229.1 | hypothetical protein | - |
| GA830_RS19255 () | 22586..23050 | + | 465 | Protein_28 | hypothetical protein | - |
| GA830_RS19260 () | 23227..24780 | + | 1554 | WP_195165230.1 | IS21 family transposase ISRsp2 | Transposase |
| GA830_RS19265 () | 24797..25573 | + | 777 | WP_195165231.1 | IS21 family transposase ISRsp2 | Transposase |
| GA830_RS19270 () | 25673..26134 | + | 462 | WP_195165232.1 | DUF3991 and toprim domain-containing protein | - |
| GA830_RS19275 () | 26342..26947 | + | 606 | WP_195165233.1 | DUF1419 domain-containing protein | - |
| GA830_RS19280 () | 26959..27357 | + | 399 | WP_195165234.1 | DUF3085 domain-containing protein | - |
| GA830_RS19285 () | 27446..32566 | + | 5121 | Protein_34 | N-6 DNA methylase | - |
| GA830_RS19290 () | 32571..33068 | - | 498 | WP_195165284.1 | RES family NAD+ phosphorylase | - |
| GA830_RS19295 () | 33073..33423 | - | 351 | WP_195165235.1 | MbcA/ParS/Xre antitoxin family protein | - |
| GA830_RS19300 () | 33774..35531 | + | 1758 | WP_195165285.1 | ParB N-terminal domain-containing protein | - |
| GA830_RS19305 () | 35628..36104 | + | 477 | WP_195165236.1 | hypothetical protein | - |
| GA830_RS19310 () | 36101..36997 | + | 897 | WP_195165237.1 | hypothetical protein | - |
| GA830_RS19315 () | 37354..37659 | - | 306 | WP_195165238.1 | alkylphosphonate utilization protein | - |
| GA830_RS19320 () | 37903..38331 | + | 429 | WP_195165239.1 | hypothetical protein | - |
| GA830_RS19325 () | 38349..38651 | + | 303 | WP_195165286.1 | hypothetical protein | - |
| GA830_RS19330 () | 39351..39935 | + | 585 | WP_195165240.1 | hypothetical protein | - |
| GA830_RS19335 () | 40288..41214 | + | 927 | WP_195165241.1 | DUF1738 domain-containing protein | - |
| GA830_RS19340 () | 41214..41402 | + | 189 | WP_195165291.1 | hypothetical protein | - |
| GA830_RS19345 () | 42012..42326 | + | 315 | WP_195165242.1 | DUF736 domain-containing protein | - |
| GA830_RS19350 () | 42407..42598 | + | 192 | WP_195165243.1 | hypothetical protein | - |
| GA830_RS19355 () | 42918..43163 | - | 246 | WP_195165244.1 | WGR domain-containing protein | - |
| GA830_RS19360 () | 43248..43632 | - | 385 | Protein_49 | thermonuclease family protein | - |
| GA830_RS19365 () | 44122..46047 | - | 1926 | WP_195165245.1 | hypothetical protein | VF |
| GA830_RS19370 () | 46034..46249 | - | 216 | WP_195165246.1 | type IV conjugative transfer system coupling protein TraD | - |
| GA830_RS19375 () | 46254..46550 | - | 297 | WP_195165247.1 | TraC family protein | - |
| GA830_RS19380 () | 46803..50105 | + | 3303 | WP_195165248.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| GA830_RS19385 () | 50102..50632 | + | 531 | WP_195165249.1 | conjugative transfer signal peptidase TraF | - |
| GA830_RS19390 () | 50553..51788 | + | 1236 | WP_195165250.1 | conjugal transfer protein TraB | - |
| GA830_RS19395 () | 51803..52435 | + | 633 | WP_195165251.1 | conjugal transfer protein TraH | - |
| GA830_RS19400 () | 52743..53069 | + | 327 | WP_195165252.1 | transcriptional regulator | - |
| GA830_RS19405 () | 53088..53721 | - | 634 | Protein_58 | hypothetical protein | VF |
| GA830_RS19410 () | 54348..55415 | + | 1068 | WP_195165253.1 | HPP family protein | - |
| GA830_RS19415 () | 55856..57163 | - | 1308 | WP_195165254.1 | hypothetical protein | VF |
| GA830_RS19420 () | 57176..57628 | - | 453 | WP_195165255.1 | conjugal transfer protein TrbH | - |
| GA830_RS19425 () | 57632..58471 | - | 840 | WP_195165287.1 | P-type conjugative transfer protein TrbG | - |
| GA830_RS19430 () | 58489..59151 | - | 663 | WP_195165256.1 | conjugal transfer protein TrbF | - |
| GA830_RS19435 () | 59169..60356 | - | 1188 | WP_195165257.1 | P-type conjugative transfer protein TrbL | - |
| GA830_RS19440 () | 60350..60541 | - | 192 | WP_195165200.1 | entry exclusion protein TrbK | - |
| GA830_RS19445 () | 60556..61356 | - | 801 | WP_195165258.1 | P-type conjugative transfer protein TrbJ | - |
| GA830_RS19450 () | 61328..63784 | - | 2457 | WP_195165259.1 | conjugal transfer protein TrbE | - |
| GA830_RS19455 () | 63795..64151 | - | 357 | WP_195165133.1 | conjugal transfer protein TrbD | - |
| GA830_RS19460 () | 64099..64467 | - | 369 | WP_195165134.1 | TrbC/VirB2 family protein | - |
| GA830_RS19465 () | 64457..65425 | - | 969 | WP_195165135.1 | Type IV secretion system protein VirB11 | VF |
| GA830_RS19470 () | 65444..65593 | - | 150 | WP_195165136.1 | hypothetical protein | - |
| GA830_RS19475 () | 65989..67167 | + | 1179 | WP_195165288.1 | Cell division protein PomZ | VF |
| GA830_RS19480 () | 67243..68241 | + | 999 | WP_195165137.1 | plasmid partitioning protein RepB | - |
| GA830_RS19485 () | 68412..69755 | + | 1344 | WP_195165260.1 | replication initiation protein RepC | - |
| GA830_RS19490 () | 69942..71111 | - | 1170 | WP_195165261.1 | ATP-binding protein | - |
| GA830_RS19495 () | 71219..71641 | - | 423 | WP_195165262.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GA830_RS19500 () | 71638..71904 | - | 267 | WP_195165263.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GA830_RS19505 () | 71996..72160 | - | 165 | Protein_78 | integrase | - |
| GA830_RS19510 () | 72227..75604 | - | 3378 | WP_195165289.1 | DEAD/DEAH box helicase | - |
| GA830_RS19515 () | 75692..76870 | - | 1179 | WP_195165264.1 | site-specific integrase | - |
| GA830_RS19520 () | 76867..77115 | - | 249 | WP_195165143.1 | type II toxin-antitoxin system VapC family toxin | - |
| GA830_RS19525 () | 77235..78851 | + | 1617 | WP_195165265.1 | DDE-type integrase/transposase/recombinase | - |
| GA830_RS19530 () | 78844..79725 | + | 882 | WP_195165266.1 | TniB family NTP-binding protein | - |
| GA830_RS19535 () | 79722..80759 | + | 1038 | WP_195165267.1 | TniQ family protein | - |
| GA830_RS19540 () | 81012..82037 | + | 1026 | WP_195165268.1 | DUF1403 family protein | - |
| GA830_RS19545 () | 82041..82748 | + | 708 | WP_195165269.1 | SMC-Scp complex subunit ScpB | - |
| GA830_RS19550 () | 82671..83813 | - | 1143 | WP_195165270.1 | IS91 family transposase ISAzo26 | Transposase |
| GA830_RS19555 () | 84158..84778 | - | 621 | WP_195165145.1 | NAD(P)H-dependent oxidoreductase | - |
| GA830_RS19560 () | 85470..89087 | + | 3618 | WP_195165271.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| GA830_RS19565 () | 89011..89424 | + | 414 | WP_195165272.1 | response regulator | - |
| GA830_RS19570 () | 89468..90496 | - | 1029 | WP_195165273.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| GA830_RS19575 () | 90811..91017 | + | 207 | WP_195165274.1 | IS256 family transposase IS1354 | Transposase |
| GA830_RS19580 () | 91394..91558 | + | 165 | Protein_93 | recombinase family protein | - |
| GA830_RS19585 () | 91710..92654 | + | 945 | WP_195165275.1 | sensor domain-containing diguanylate cyclase | - |
| GA830_RS19590 () | 93043..93423 | - | 381 | Protein_95 | IS110 family transposase ISAzs32 | Transposase |
| GA830_RS19595 () | 93423..93608 | + | 186 | Protein_96 | IS110 family transposase ISAzs32 | Transposase |
| GA830_RS19600 () | 93729..93967 | + | 239 | Protein_97 | transposase | - |
| GA830_RS19605 () | 93951..94403 | - | 453 | Protein_98 | IS5 family transposase ISGdi2 | Transposase |
| GA830_RS19610 () | 94590..94955 | + | 366 | WP_195165276.1 | hypothetical protein | - |
| GA830_RS19615 () | 94895..96658 | - | 1764 | WP_195165092.1 | hypothetical protein | VF |
| GA830_RS19620 () | 96997..97695 | + | 699 | WP_195165093.1 | ferritin-like domain-containing protein | - |
| GA830_RS19625 () | 97707..98369 | + | 663 | WP_195165094.1 | ferritin-like domain-containing protein | - |
| GA830_RS19630 () | 98761..98970 | - | 210 | WP_195165129.1 | hypothetical protein | - |
| GA830_RS19635 () | 98870..99361 | - | 492 | WP_195165095.1 | hypothetical protein | - |
| GA830_RS19640 () | 99559..99891 | - | 333 | WP_195165096.1 | hypothetical protein | - |
| GA830_RS19645 () | 100065..100211 | + | 147 | Protein_106 | IS256 family transposase ISPebe1 | Transposase |
| GA830_RS19650 () | 100225..100749 | + | 525 | WP_195165130.1 | DUF3991 and toprim domain-containing protein | - |
| GA830_RS19655 () | 100943..101548 | + | 606 | WP_195165097.1 | DUF1419 domain-containing protein | - |
| GA830_RS19660 () | 101559..102101 | + | 543 | WP_195165098.1 | DUF3085 domain-containing protein | - |
| GA830_RS19665 () | 102532..102720 | + | 189 | WP_195165099.1 | hypothetical protein | - |
| GA830_RS19670 () | 102940..103842 | + | 903 | WP_195165100.1 | DUF3991 and toprim domain-containing protein | - |
| GA830_RS19675 () | 104047..104649 | + | 603 | WP_195165101.1 | DUF1419 domain-containing protein | - |
| GA830_RS19680 () | 104659..105069 | + | 411 | WP_195165102.1 | DUF3085 domain-containing protein | - |
| GA830_RS19685 () | 105153..110264 | + | 5112 | Protein_114 | DEAD/DEAH box helicase family protein | - |
| GA830_RS19690 () | 110324..110575 | - | 252 | WP_195165290.1 | BrnA antitoxin family protein | - |
| GA830_RS19695 () | 110587..110890 | - | 304 | Protein_116 | BrnT family toxin | - |
| GA830_RS19700 () | 111195..111494 | + | 300 | Protein_117 | ParB N-terminal domain-containing protein | - |
| GA830_RS19705 () | 111518..112912 | + | 1395 | Protein_118 | hypothetical protein | - |
| GA830_RS19710 () | 113801..115066 | + | 1266 | WP_195165277.1 | FAD-binding oxidoreductase | - |
| GA830_RS19715 () | 115112..116092 | + | 981 | WP_195165108.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| GA830_RS19720 () | 116169..116636 | + | 468 | WP_195165109.1 | tripartite tricarboxylate transporter TctB family protein | - |
| GA830_RS19725 () | 116636..118147 | + | 1512 | WP_195165110.1 | tripartite tricarboxylate transporter permease | - |
| GA830_RS19730 () | 118144..118851 | + | 708 | WP_195165111.1 | GntR family transcriptional regulator | - |
| GA830_RS19735 () | 118875..119765 | + | 891 | Protein_124 | 2-methylisocitrate lyase | VF |
| GA830_RS19740 () | 120133..120474 | - | 342 | WP_195165278.1 | hypothetical protein | - |
| GA830_RS19745 () | 120528..121136 | - | 609 | WP_195165279.1 | hypothetical protein | - |
| GA830_RS19750 () | 121614..122471 | - | 858 | WP_195165113.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GA830_RS19755 () | 122468..123295 | - | 828 | WP_195165114.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| GA830_RS19760 () | 123596..124783 | - | 1188 | WP_195165115.1 | hypothetical protein | VF |
| GA830_RS19765 () | 125217..125585 | - | 369 | WP_195165132.1 | hypothetical protein | - |
| GA830_RS19770 () | 126080..126961 | - | 882 | WP_195165116.1 | TniB family NTP-binding protein | - |
| GA830_RS19775 () | 126974..128587 | - | 1614 | WP_195165117.1 | DDE-type integrase/transposase/recombinase | - |
| GA830_RS19780 () | 129769..130641 | + | 873 | WP_195165118.1 | hypothetical protein | - |
| GA830_RS19785 () | 130638..131681 | - | 1044 | WP_195165119.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GA830_RS19790 () | 131678..132346 | - | 669 | WP_195165120.1 | hypothetical protein | - |
| GA830_RS19795 () | 132550..133872 | - | 1323 | WP_195165121.1 | MFS transporter | - |
| GA830_RS19800 () | 134126..134290 | + | 165 | Protein_137 | IS701 family transposase | - |
| GA830_RS19805 () | 134627..135688 | + | 1062 | WP_195165122.1 | hypothetical protein | - |
| GA830_RS19810 () | 135705..137642 | + | 1938 | WP_195165280.1 | Amidophosphoribosyltransferase | VF |
| GA830_RS19815 () | 137654..137908 | + | 255 | WP_195165123.1 | acyl carrier protein | - |
| GA830_RS19820 () | 137929..139467 | + | 1539 | WP_195165124.1 | acyl--CoA ligase | - |
| GA830_RS19825 () | 139464..140441 | + | 978 | WP_195165281.1 | NAD(+) synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|