MGE detailed information
MGE type: Genomic_island MGE length: 15074 bp
Accession: NZ_CP045457 Location: 1664958..1680031 Organism: Escherichia coli strain ET12567 Replicon: chromosome
Accession: NZ_CP045457 Location: 1664958..1680031 Organism: Escherichia coli strain ET12567 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECET_RS08240 () | 1663335..1664075 | + | 741 | Protein_1609 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| ECET_RS08245 () | 1664958..1665224 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| ECET_RS08250 () | 1665224..1666546 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| ECET_RS08255 () | 1666858..1667066 | + | 209 | Protein_1612 | helix-turn-helix transcriptional regulator | - |
| ECET_RS08260 () | 1667321..1668547 | + | 1227 | Protein_1613 | hypothetical protein | VF |
| ECET_RS08265 () | 1668561..1669091 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| ECET_RS08270 () | 1669104..1669607 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| ECET_RS08275 () | 1669666..1670580 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| ECET_RS08280 () | 1670914..1673193 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| ECET_RS08285 () | 1673441..1673638 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| ECET_RS08290 () | 1673713..1674474 | + | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| ECET_RS08295 () | 1674876..1676558 | + | 1683 | WP_001295684.1 | sulfatase | - |
| ECET_RS08300 () | 1676610..1677767 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| ECET_RS08305 () | 1677733..1677855 | - | 123 | WP_120795387.1 | protein YneP | - |
| ECET_RS08310 () | 1678058..1678813 | + | 756 | WP_097734296.1 | ABC transporter ATP-binding protein | - |
| ECET_RS08315 () | 1678823..1680031 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| ECET_RS08320 () | 1680137..1681081 | + | 945 | Protein_1625 | ABC transporter ATP-binding protein/permease | - |
| ECET_RS08325 () | 1681119..1683491 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.007 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.01 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.007 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.007 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.007 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.007 |