MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70393 bp
Accession: NZ_CP045383 Location: 1..70393 Organism: Labrenzia sp. THAF35 Replicon: plasmid pTHAF35_c
Accession: NZ_CP045383 Location: 1..70393 Organism: Labrenzia sp. THAF35 Replicon: plasmid pTHAF35_c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU93_RS30920 () | 77..1885 | - | 1809 | WP_152508056.1 | phosphomethylpyrimidine synthase ThiC | - |
| FIU93_RS30925 () | 2372..3565 | + | 1194 | WP_088665297.1 | Sporulation initiation inhibitor protein Soj | VF |
| FIU93_RS30930 () | 3569..4570 | + | 1002 | WP_152508057.1 | plasmid partitioning protein RepB | - |
| FIU93_RS30935 () | 4794..6050 | + | 1257 | WP_062492133.1 | replication protein C | - |
| FIU93_RS30940 () | 6165..6407 | + | 243 | WP_082809967.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FIU93_RS30945 () | 6404..6811 | + | 408 | WP_062492135.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FIU93_RS30950 () | 7036..7242 | + | 207 | WP_062492137.1 | antitoxin VbhA family protein | - |
| FIU93_RS30955 () | 7307..9025 | + | 1719 | WP_152508058.1 | Fic family protein | - |
| FIU93_RS30960 () | 9301..9645 | + | 345 | WP_062492226.1 | DUF736 family protein | - |
| FIU93_RS30965 () | 9950..10237 | + | 288 | WP_062492139.1 | hypothetical protein | - |
| FIU93_RS30970 () | 10395..11915 | - | 1521 | WP_173017469.1 | Protein VirD4 | VF |
| FIU93_RS30975 () | 11979..12530 | - | 552 | WP_152508059.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| FIU93_RS30980 () | 12656..15553 | + | 2898 | WP_152508060.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| FIU93_RS30985 () | 15759..16622 | - | 864 | WP_152508061.1 | HTH-type transcriptional regulator CysL | VF |
| FIU93_RS30990 () | 16628..17626 | - | 999 | WP_152508062.1 | hydroxyacid dehydrogenase | - |
| FIU93_RS30995 () | 17760..18548 | + | 789 | WP_152508063.1 | Phosphate-import ATP-binding protein PhnC | VF |
| FIU93_RS31000 () | 18574..19449 | + | 876 | WP_152508064.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| FIU93_RS31005 () | 19473..20291 | + | 819 | WP_152508065.1 | phosphonate ABC transporter, permease protein PhnE | - |
| FIU93_RS31010 () | 20437..20844 | - | 408 | WP_173017468.1 | hypothetical protein | - |
| FIU93_RS31015 () | 20789..21046 | - | 258 | WP_062492143.1 | conjugal transfer protein TraD | - |
| FIU93_RS31020 () | 21093..21344 | - | 252 | WP_062492145.1 | hypothetical protein | - |
| FIU93_RS31025 () | 21656..22798 | - | 1143 | WP_152508066.1 | hypothetical protein | - |
| FIU93_RS31030 () | 22993..26358 | + | 3366 | WP_040450269.1 | Mobilization protein A | Relaxase |
| FIU93_RS31035 () | 26244..26912 | + | 669 | WP_081450444.1 | conjugative transfer signal peptidase TraF | - |
| FIU93_RS31040 () | 26833..28071 | + | 1239 | WP_081450443.1 | conjugal transfer protein TraB | - |
| FIU93_RS31045 () | 28076..28702 | + | 627 | WP_008188277.1 | hypothetical protein | - |
| FIU93_RS31050 () | 28699..29067 | + | 369 | WP_062492154.1 | thermonuclease family protein | - |
| FIU93_RS31055 () | 29064..29231 | - | 168 | WP_152508067.1 | helix-turn-helix transcriptional regulator | - |
| FIU93_RS31060 () | 29274..29828 | - | 555 | Protein_28 | transposase | - |
| FIU93_RS31065 () | 29905..30378 | - | 474 | WP_040450310.1 | signal peptidase II | - |
| FIU93_RS31070 () | 30401..30856 | - | 456 | WP_040450265.1 | DUF411 domain-containing protein | - |
| FIU93_RS31075 () | 31040..31666 | - | 627 | WP_008188278.1 | SCO family protein | - |
| FIU93_RS31080 () | 31666..32130 | - | 465 | WP_040450263.1 | copper chaperone PCu(A)C | - |
| FIU93_RS31085 () | 32158..32817 | - | 660 | WP_008188213.1 | thioredoxin domain-containing protein | - |
| FIU93_RS31090 () | 32814..33236 | - | 423 | WP_008188234.1 | disulfide bond formation protein B | - |
| FIU93_RS31095 () | 33717..34145 | + | 429 | WP_008188248.1 | IS607 family transposase ISChh1 | Transposase |
| FIU93_RS31100 () | 34481..35242 | + | 762 | WP_008188268.1 | transglutaminase family protein | - |
| FIU93_RS31105 () | 35232..36173 | + | 942 | WP_040450261.1 | cation diffusion facilitator family transporter | - |
| FIU93_RS31110 () | 36266..37617 | + | 1352 | Protein_38 | IS3 family transposase | - |
| FIU93_RS31115 () | 37868..38536 | - | 669 | WP_134853287.1 | L,D-transpeptidase | - |
| FIU93_RS31120 () | 38772..39332 | - | 561 | WP_040450256.1 | L,D-transpeptidase | - |
| FIU93_RS31125 () | 39924..42059 | + | 2136 | WP_081450442.1 | cadmium-translocating P-type ATPase | - |
| FIU93_RS31130 () | 42409..43161 | + | 753 | WP_008188302.1 | DUF1624 domain-containing protein | - |
| FIU93_RS31135 () | 43201..44181 | - | 981 | WP_040450304.1 | murein L,D-transpeptidase | - |
| FIU93_RS31140 () | 44431..45015 | - | 585 | WP_152508050.1 | DedA family protein | - |
| FIU93_RS31145 () | 45557..46174 | + | 618 | WP_152508051.1 | transglutaminase-like cysteine peptidase | - |
| FIU93_RS31150 () | 46339..47082 | - | 744 | WP_062492091.1 | phosphonate ABC transporter, permease protein PhnE | - |
| FIU93_RS31155 () | 47082..47852 | - | 771 | WP_077294817.1 | Phosphate-import ATP-binding protein PhnC | VF |
| FIU93_RS31160 () | 47849..48706 | - | 858 | WP_062492093.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| FIU93_RS31165 () | 48706..50559 | - | 1854 | WP_077294814.1 | cytochrome C | - |
| FIU93_RS31170 () | 50679..51134 | + | 456 | WP_062492097.1 | Transcriptional regulator MntR | VF |
| FIU93_RS31175 () | 51504..51893 | + | 390 | WP_209010120.1 | hypothetical protein | - |
| FIU93_RS31180 () | 52022..53140 | + | 1119 | WP_152508068.1 | IS110 family transposase ISMtsp6 | Transposase |
| FIU93_RS31185 () | 53457..53894 | + | 438 | WP_152508069.1 | IS66 family transposase IS66 | Transposase |
| FIU93_RS31190 () | 53891..54238 | + | 348 | WP_152508070.1 | IS66 family transposase IS66 | Transposase |
| FIU93_RS31195 () | 54284..55930 | + | 1647 | WP_152508071.1 | IS66 family transposase IS66 | Transposase |
| FIU93_RS31200 () | 55927..56571 | + | 645 | WP_152508072.1 | plasmid pRiA4b ORF-3 family protein | - |
| FIU93_RS31205 () | 56611..57117 | + | 507 | Protein_57 | phosphatase PAP2 family protein | - |
| FIU93_RS31210 () | 57405..59408 | - | 2004 | WP_062492224.1 | Murein DD-endopeptidase MepM | VF |
| FIU93_RS31215 () | 59523..60176 | - | 654 | WP_062492099.1 | thioredoxin domain-containing protein | - |
| FIU93_RS31220 () | 60711..61037 | + | 327 | WP_077294808.1 | DUF1636 family protein | - |
| FIU93_RS31225 () | 61040..61564 | - | 525 | WP_062492102.1 | hypothetical protein | - |
| FIU93_RS31230 () | 61642..62106 | - | 465 | Protein_62 | CbtA family protein | - |
| FIU93_RS31235 () | 62166..62462 | - | 297 | WP_062492104.1 | conjugal transfer protein TrbD | - |
| FIU93_RS31240 () | 62455..62814 | - | 360 | WP_152508073.1 | TrbC/VirB2 family protein | - |
| FIU93_RS31245 () | 62804..63205 | - | 402 | Protein_65 | Type IV secretion system protein VirB11 | VF |
| FIU93_RS31250 () | 63412..63693 | + | 282 | WP_062492108.1 | hypothetical protein | - |
| FIU93_RS31255 () | 64083..64337 | + | 255 | WP_062492109.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FIU93_RS31260 () | 64330..64758 | + | 429 | WP_152508074.1 | hypothetical protein | - |
| FIU93_RS31265 () | 64773..65006 | + | 234 | WP_152508075.1 | hypothetical protein | - |
| FIU93_RS31270 () | 65007..65453 | + | 447 | WP_152508076.1 | hypothetical protein | - |
| FIU93_RS31275 () | 65468..65920 | - | 453 | WP_152508077.1 | MucR family transcriptional regulator | - |
| FIU93_RS31280 () | 66560..67810 | + | 1251 | WP_152508078.1 | IS110 family transposase ISMpa1 | Transposase |
| FIU93_RS31285 () | 68390..68845 | + | 456 | WP_062492122.1 | hypothetical protein | - |
| FIU93_RS31290 () | 68849..69694 | + | 846 | WP_062492124.1 | methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|