NZ_CP0453611..219612

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 219612 bp
Accession: NZ_CP045361        Location: 1..219612         Organism: Roseivivax sp. THAF40       Replicon: plasmid pTHAF40_a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FIU97_RS18540 () 171..470 - 300 WP_152452964.1 hypothetical protein -
FIU97_RS18545 () 470..1105 - 636 WP_152452966.1 DUF1826 domain-containing protein -
FIU97_RS18550 () 1102..2313 - 1212 WP_152452968.1 zinc metallochaperone GTPase ZigA -
FIU97_RS18555 () 2310..3446 - 1137 WP_152452970.1 GTP-binding protein -
FIU97_RS18560 () 4066..4956 - 891 WP_152452972.1 serine hydrolase -
FIU97_RS18565 () 5273..6913 + 1641 WP_152452974.1 BCCT family transporter -
FIU97_RS18570 () 7109..7855 - 747 WP_152452978.1 helix-turn-helix domain-containing protein -
FIU97_RS18575 () 7951..9678 + 1728 WP_152452980.1 thiamine pyrophosphate-requiring protein -
FIU97_RS18580 () 9684..10517 - 834 WP_152452982.1 3-keto-5-aminohexanoate cleavage protein -
FIU97_RS18585 () 10546..11904 - 1359 WP_152453161.1 TRAP transporter large permease subunit -
FIU97_RS18590 () 11901..12392 - 492 WP_152452984.1 TRAP transporter small permease -
FIU97_RS18595 () 12396..13427 - 1032 WP_152452986.1 TRAP transporter substrate-binding protein -
FIU97_RS18600 () 13471..14643 - 1173 WP_152452988.1 4-hydroxybenzoate 3-monooxygenase -
FIU97_RS18605 () 14749..15348 - 600 WP_152452990.1 protocatechuate 3,4-dioxygenase subunit alpha -
FIU97_RS18610 () 15350..16075 - 726 WP_152452992.1 protocatechuate 3,4-dioxygenase subunit beta -
FIU97_RS18615 () 16057..16452 - 396 WP_152452994.1 4-carboxymuconolactone decarboxylase -
FIU97_RS18620 () 16716..17621 + 906 WP_152452996.1 LysR family transcriptional regulator -
FIU97_RS18625 () 17869..18525 - 657 WP_152452998.1 TenA family protein -
FIU97_RS18630 () 18518..19360 - 843 WP_152453000.1 BtpA/SgcQ family protein -
FIU97_RS18635 () 19393..20283 + 891 WP_152453002.1 ribokinase -
FIU97_RS18640 () 20339..21097 - 759 WP_152453003.1 cytoplasmic protein -
FIU97_RS18645 () 21118..22182 - 1065 WP_152453005.1 phosphotriesterase -
FIU97_RS18650 () 22179..23186 - 1008 WP_152453007.1 ABC transporter permease -
FIU97_RS18655 () 23186..23968 - 783 WP_152453009.1 sugar ABC transporter ATP-binding protein -
FIU97_RS18660 () 23965..24903 - 939 WP_152453011.1 substrate-binding domain-containing protein -
FIU97_RS18665 () 24931..25953 - 1023 WP_152453013.1 LacI family transcriptional regulator -
FIU97_RS18670 () 26227..29703 - 3477 WP_152455979.1 hypothetical protein -
FIU97_RS18675 () 29722..48045 - 18324 WP_172976594.1 DUF11 domain-containing protein -
FIU97_RS18680 () 48511..49590 + 1080 WP_172975799.1 efflux RND transporter periplasmic adaptor subunit -
FIU97_RS18685 () 49595..52657 + 3063 WP_152453021.1 efflux RND transporter permease subunit -
FIU97_RS18690 () 52692..53090 - 399 WP_152453023.1 RidA family protein -
FIU97_RS18695 () 53087..53506 - 420 WP_152453025.1 acyl-CoA thioesterase -
FIU97_RS18700 () 53667..55955 + 2289 WP_152453027.1 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase -
FIU97_RS18705 () 55952..56701 + 750 WP_152453029.1 Putative ketoacyl reductase VF
FIU97_RS18710 () 56704..57006 - 303 WP_152453031.1 CcdB family protein -
FIU97_RS18715 () 57003..57260 - 258 WP_152453033.1 hypothetical protein -
FIU97_RS18720 () 57341..58576 - 1236 WP_152453034.1 5-methylphenazine-1-carboxylate 1-monooxygenase VF
FIU97_RS18725 () 58581..59033 - 453 WP_152453036.1 cupin domain-containing protein -
FIU97_RS18730 () 59053..59742 - 690 WP_152453038.1 ABC transporter ATP-binding protein -
FIU97_RS18735 () 59742..60494 - 753 WP_152453040.1 Lipopolysaccharide export system ATP-binding protein LptB VF
FIU97_RS18740 () 60491..61483 - 993 WP_152453042.1 branched-chain amino acid ABC transporter permease -
FIU97_RS18745 () 61483..62400 - 918 WP_152453043.1 branched-chain amino acid ABC transporter permease -
FIU97_RS18750 () 62427..63626 - 1200 WP_152453045.1 ABC transporter substrate-binding protein -
FIU97_RS18755 () 63962..64444 + 483 WP_152453163.1 MarR family transcriptional regulator -
FIU97_RS18760 () 64441..65241 + 801 WP_152453047.1 enoyl-CoA hydratase family protein -
FIU97_RS18765 () 65301..66458 + 1158 WP_152453049.1 acyl-CoA dehydrogenase family protein -
FIU97_RS18770 () 66455..67282 + 828 WP_152453051.1 tryptophan 2,3-dioxygenase -
FIU97_RS18775 () 67321..68946 + 1626 WP_152453053.1 AMP-binding protein -
FIU97_RS18780 () 68951..70000 - 1050 WP_152453055.1 hybrid-cluster NAD(P)-dependent oxidoreductase -
FIU97_RS18785 () 70003..71238 - 1236 WP_152453057.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
FIU97_RS18790 () 71242..73281 - 2040 WP_152453059.1 NADH:flavin oxidoreductase -
FIU97_RS18795 () 73531..74184 + 654 WP_152453061.1 paraquat-inducible protein A -
FIU97_RS18800 () 74145..74798 + 654 WP_152453063.1 paraquat-inducible protein A -
FIU97_RS18805 () 74802..77261 + 2460 WP_152455983.1 MCE family protein -
FIU97_RS18810 () 77279..77833 + 555 WP_152453165.1 membrane integrity-associated transporter subunit PqiC -
FIU97_RS18815 () 77936..78559 + 624 WP_152453067.1 CDP-alcohol phosphatidyltransferase family protein -
FIU97_RS18820 () 78556..79767 + 1212 WP_152453069.1 ABC transporter substrate-binding protein -
FIU97_RS18825 () 79849..81501 + 1653 WP_152453071.1 ABC transporter permease subunit -
FIU97_RS18830 () 81494..82129 + 636 WP_152453072.1 Spermidine/putrescine import ATP-binding protein PotA VF
FIU97_RS18835 () 82187..82543 + 357 WP_152453074.1 CidA/LrgA family protein -
FIU97_RS18840 () 82536..83252 + 717 WP_152453076.1 LrgB family protein -
FIU97_RS18845 () 83267..83695 - 429 WP_152453078.1 hypothetical protein -
FIU97_RS18850 () 83692..84315 - 624 WP_152453080.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
FIU97_RS18855 () 84312..85004 - 693 WP_152456080.1 ABC transporter permease -
FIU97_RS18860 () 85073..86038 - 966 WP_152456082.1 ABC transporter substrate-binding protein -
FIU97_RS18865 () 86197..86640 - 444 WP_152455985.1 cytochrome c family protein -
FIU97_RS18870 () 86877..87266 - 390 WP_152455987.1 type II toxin-antitoxin system VapC family toxin -
FIU97_RS18875 () 87263..87490 - 228 WP_152455989.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
FIU97_RS18880 () 87550..88785 - 1236 WP_152455992.1 replication initiation protein -
FIU97_RS18885 () 89394..90800 + 1407 WP_152455994.1 AAA family ATPase -
FIU97_RS18890 () 90778..91848 + 1071 WP_152455996.1 ParB/RepB/Spo0J family partition protein -
FIU97_RS18895 () 91983..92252 + 270 WP_152455998.1 hypothetical protein -
FIU97_RS18900 () 92252..93595 + 1344 WP_152456000.1 hypothetical protein -
FIU97_RS18905 () 93538..94671 - 1134 WP_152456002.1 hypothetical protein -
FIU97_RS18910 () 94668..95996 - 1329 WP_152456004.1 oligosaccharide flippase family protein -
FIU97_RS18915 () 95993..96898 - 906 WP_152456006.1 acyltransferase -
FIU97_RS18920 () 96914..97234 - 321 WP_152456008.1 sugar transferase -
FIU97_RS18925 () 97353..98084 - 732 WP_152456010.1 serine/threonine protein phosphatase -
FIU97_RS18930 () 98335..100422 + 2088 WP_152456012.1 YjbH domain-containing protein -
FIU97_RS18935 () 100419..101021 + 603 WP_152456014.1 YjbF family lipoprotein -
FIU97_RS18940 () 101083..102429 + 1347 WP_172976600.1 polysaccharide biosynthesis/export family protein -
FIU97_RS18945 () 102664..103644 + 981 WP_152456016.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP VF
FIU97_RS18950 () 103648..104007 + 360 WP_152456018.1 Hpt domain-containing protein -
FIU97_RS18955 () 104004..104384 - 381 WP_152456020.1 Transcriptional regulatory protein KdpE VF
FIU97_RS18960 () 104667..106595 + 1929 WP_172976595.1 PAS-domain containing protein -
FIU97_RS18965 () 106687..108363 + 1677 WP_152456024.1 Sensor protein kinase WalK VF
FIU97_RS18970 () 108752..110974 + 2223 WP_152456026.1 NADP-dependent isocitrate dehydrogenase -
FIU97_RS18975 () 111219..112163 + 945 WP_152456028.1 flippase-like domain-containing protein -
FIU97_RS18980 () 112203..113606 + 1404 WP_152456030.1 alkaline phosphatase family protein -
FIU97_RS18985 () 113614..114960 - 1347 WP_152456032.1 TrkH family potassium uptake protein -
FIU97_RS18990 () 114962..115624 - 663 WP_152456034.1 TrkA family potassium uptake protein -
FIU97_RS18995 () 115701..116231 - 531 WP_152456036.1 transcriptional activator RfaH -
FIU97_RS19000 () 116312..118378 - 2067 WP_152456086.1 polysaccharide biosynthesis tyrosine autokinase -
FIU97_RS19005 () 118618..118956 - 339 WP_152456038.1 hypothetical protein -
FIU97_RS19010 () 119407..120513 + 1107 WP_172976596.1 glycosyltransferase -
FIU97_RS19015 () 120687..120866 + 180 WP_152456041.1 hypothetical protein -
FIU97_RS19020 () 120878..121104 - 227 Protein_96 type II toxin-antitoxin system ParD family antitoxin -
FIU97_RS19025 () 121204..121605 - 402 WP_152456043.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
FIU97_RS19030 () 121605..121835 - 231 WP_152452774.1 antitoxin Antitoxin Detail
FIU97_RS19035 () 122331..122876 - 546 WP_152456045.1 hypothetical protein -
FIU97_RS19040 () 122869..123402 - 534 WP_152456047.1 hypothetical protein -
FIU97_RS19045 () 123816..124064 - 249 WP_172976597.1 helix-turn-helix domain-containing protein -
FIU97_RS19050 () 124184..125020 + 837 WP_152456049.1 tyrosine-type recombinase/integrase -
FIU97_RS19055 () 125355..125939 - 585 WP_152456051.1 terminase small subunit -
FIU97_RS19060 () 126175..127545 - 1371 WP_152456053.1 Phosphomannomutase/phosphoglucomutase VF
FIU97_RS19065 () 127542..128984 - 1443 WP_152456055.1 Alginate biosynthesis protein AlgA VF
FIU97_RS19070 () 129133..130110 - 978 WP_172976598.1 GDP-L-fucose synthase VF
FIU97_RS19075 () 130107..131231 - 1125 WP_152456057.1 GDP-mannose 4,6-dehydratase VF
FIU97_RS19080 () 131248..131988 - 741 WP_152456059.1 putative glycosyltransferase VF
FIU97_RS19085 () 132194..133208 + 1015 Protein_109 IS5 family transposase ISPpa4 Transposase
FIU97_RS19090 () 133434..133598 - 165 Protein_110 IS256 family transposase -
FIU97_RS19095 () 133726..134292 - 567 WP_172976601.1 WcaF family extracellular polysaccharide biosynthesis acetyltransferase -
FIU97_RS19100 () 134292..135485 - 1194 WP_152456062.1 glycosyltransferase -
FIU97_RS19105 () 135479..136570 - 1092 WP_152456064.1 glycosyltransferase -
FIU97_RS19110 () 136629..137386 - 758 Protein_114 IS5 family transposase IS1248A Transposase
FIU97_RS19115 () 137780..138536 + 757 Protein_115 IS5 family transposase ISPso2 Transposase
FIU97_RS19120 () 138565..139674 - 1110 WP_172976599.1 hypothetical protein -
FIU97_RS19125 () 140073..140439 + 367 Protein_117 IS5 family transposase ISPpa2 Transposase
FIU97_RS19130 () 140571..141562 + 992 Protein_118 IS110 family transposase -
FIU97_RS19135 () 141871..142175 + 305 Protein_119 transposase -
FIU97_RS19140 () 142722..143816 - 1095 WP_152456068.1 hypothetical protein -
FIU97_RS19145 () 144044..144802 - 759 Protein_121 IS5 family transposase -
FIU97_RS19150 () 145350..146621 - 1272 WP_152456070.1 oligosaccharide flippase family protein -
FIU97_RS19155 () 146630..147742 - 1113 WP_152456092.1 UDP-N-acetylglucosamine 2-epimerase VF
FIU97_RS19160 () 148001..148556 - 556 Protein_124 transposase -
FIU97_RS19165 () 148811..149155 - 345 WP_152452822.1 MarR family EPS-associated transcriptional regulator -
FIU97_RS19170 () 149642..150400 + 759 WP_152452824.1 hypothetical protein -
FIU97_RS19175 () 150683..151744 - 1062 WP_152452826.1 TRAP transporter substrate-binding protein DctP -
FIU97_RS19180 () 151774..153249 - 1476 WP_152452828.1 TRAP transporter large permease -
FIU97_RS19185 () 153250..153741 - 492 WP_152456094.1 TRAP transporter small permease subunit -
FIU97_RS19190 () 153898..154413 - 516 WP_152452830.1 flavin reductase family protein -
FIU97_RS19195 () 154413..155303 - 891 WP_152453156.1 aldo/keto reductase -
FIU97_RS19200 () 155306..156463 - 1158 WP_152452832.1 LLM class flavin-dependent oxidoreductase -
FIU97_RS19205 () 156556..157257 + 702 WP_152452834.1 GntR family transcriptional regulator -
FIU97_RS19210 () 157274..158356 + 1083 WP_152452836.1 Gfo/Idh/MocA family oxidoreductase -
FIU97_RS19215 () 158398..158961 - 564 WP_152452838.1 hypothetical protein -
FIU97_RS19220 () 159154..159471 - 318 WP_152452840.1 hypothetical protein -
FIU97_RS19225 () 159573..159959 - 387 WP_152452842.1 hypothetical protein -
FIU97_RS19230 () 160124..160969 - 846 WP_152452844.1 hypothetical protein -
FIU97_RS19235 () 161135..161473 - 339 WP_152452846.1 hypothetical protein -
FIU97_RS19240 () 161470..163407 - 1938 WP_152452848.1 site-specific integrase -
FIU97_RS19245 () 163664..164035 - 372 WP_152452850.1 helix-turn-helix domain-containing protein -
FIU97_RS19250 () 164252..164911 + 660 WP_152452852.1 hypothetical protein -
FIU97_RS19255 () 164975..166108 + 1134 WP_152452854.1 hypothetical protein -
FIU97_RS19260 () 166677..167075 + 399 WP_152452856.1 hypothetical protein -
FIU97_RS19265 () 167349..168020 + 672 WP_152452858.1 hypothetical protein -
FIU97_RS20765 () 168056..168211 + 156 WP_172975794.1 hypothetical protein -
FIU97_RS19270 () 168387..169721 + 1335 WP_152452860.1 amidase -
FIU97_RS19275 () 169748..170620 - 873 WP_152456072.1 Glucose-1-phosphate thymidylyltransferase 1 VF
FIU97_RS19280 () 170617..171459 - 843 WP_152452864.1 dTDP-4-dehydrorhamnose reductase -
FIU97_RS19285 () 171456..172496 - 1041 WP_152452865.1 dTDP-glucose 4,6-dehydratase 2 VF
FIU97_RS19290 () 172720..173610 - 891 WP_152452867.1 LysR family transcriptional regulator -
FIU97_RS19295 () 173712..174209 + 498 WP_152452869.1 lactoylglutathione lyase family protein -
FIU97_RS19300 () 174359..175429 - 1071 WP_152452871.1 DUF1513 domain-containing protein -
FIU97_RS19305 () 175434..176420 - 987 WP_152452873.1 imelysin family protein -
FIU97_RS19310 () 176417..177973 - 1557 WP_152452875.1 c-type cytochrome -
FIU97_RS19315 () 178034..179296 - 1263 WP_152456074.1 peptidase -
FIU97_RS19320 () 179351..180331 - 981 WP_152452879.1 energy transducer TonB -
FIU97_RS19325 () 180328..180714 - 387 WP_152452881.1 biopolymer transporter ExbD -
FIU97_RS19330 () 180711..181058 - 348 WP_152452883.1 biopolymer transporter ExbD -
FIU97_RS19335 () 181084..181734 - 651 WP_152452885.1 MotA/TolQ/ExbB proton channel family protein -
FIU97_RS19340 () 181731..182165 - 435 WP_152452887.1 hypothetical protein -
FIU97_RS19345 () 182321..182791 - 471 WP_152452889.1 General stress protein 20U VF
FIU97_RS19350 () 182900..183322 - 423 WP_152452891.1 hypothetical protein -
FIU97_RS19355 () 183367..183627 - 261 WP_152452893.1 DUF1289 domain-containing protein -
FIU97_RS19360 () 183692..184093 - 402 WP_152452895.1 hypothetical protein -
FIU97_RS19365 () 184171..184344 - 174 WP_152452897.1 hemin uptake protein HemP -
FIU97_RS20770 () 184341..184511 - 171 WP_172975795.1 hypothetical protein -
FIU97_RS19370 () 184682..185050 - 369 WP_152452899.1 VOC family protein -
FIU97_RS19375 () 185047..185373 - 327 WP_152452901.1 antibiotic biosynthesis monooxygenase -
FIU97_RS19380 () 185553..186335 - 783 WP_152452903.1 Hemin import ATP-binding protein HmuV VF
FIU97_RS19385 () 186332..187399 - 1068 WP_152452905.1 Hemin transport system permease protein HmuU VF
FIU97_RS19390 () 187403..188248 - 846 WP_152453158.1 Hemin-binding periplasmic protein HmuT VF
FIU97_RS19395 () 188296..189348 - 1053 WP_152452907.1 Hemin transport protein HemS VF
FIU97_RS19400 () 189547..191622 + 2076 WP_152452909.1 TonB-dependent receptor plug domain-containing protein -
FIU97_RS19405 () 191939..192937 + 999 WP_172975796.1 IS30 family transposase ISRssp4 Transposase
FIU97_RS19410 () 193055..193645 - 591 WP_152452913.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase -
FIU97_RS19415 () 193638..194567 - 930 WP_152452915.1 2-dehydro-3-deoxygalactonokinase -
FIU97_RS19420 () 194659..194922 - 264 Protein_178 mandelate racemase/muconate lactonizing enzyme family protein -
FIU97_RS19425 () 194919..195953 - 1035 WP_152452917.1 LacI family DNA-binding transcriptional regulator -
FIU97_RS19430 () 196097..197116 + 1020 WP_152452919.1 TRAP transporter substrate-binding protein -
FIU97_RS19435 () 197184..197741 + 558 WP_152452921.1 TRAP transporter small permease -
FIU97_RS19440 () 197741..199066 + 1326 WP_152452923.1 TRAP transporter large permease subunit -
FIU97_RS19445 () 199084..200877 + 1794 WP_152452925.1 dihydroxy-acid dehydratase family protein -
FIU97_RS19450 () 200886..201821 + 936 WP_152452927.1 sugar kinase -
FIU97_RS19455 () 202169..203026 + 858 WP_152452929.1 hypothetical protein -
FIU97_RS19460 () 203023..204558 + 1536 WP_152452931.1 hypothetical protein -
FIU97_RS19465 () 204745..205296 - 552 WP_172975797.1 Transcriptional regulatory protein UhpA VF
FIU97_RS19470 () 205378..206538 + 1161 WP_152452933.1 acetyl-CoA acetyltransferase -
FIU97_RS19475 () 206535..208064 + 1530 WP_152452935.1 AMP-binding protein -
FIU97_RS19480 () 208061..208864 + 804 WP_152452937.1 D-beta-hydroxybutyrate dehydrogenase VF
FIU97_RS19485 () 209042..210163 + 1122 WP_152452939.1 LytTR family transcriptional regulator DNA-binding domain-containing protein -
FIU97_RS19490 () 210277..211131 + 855 WP_152456076.1 xanthine dehydrogenase family protein subunit M -
FIU97_RS19495 () 211144..211638 + 495 WP_152452952.1 (2Fe-2S)-binding protein -
FIU97_RS19500 () 211635..214061 + 2427 WP_152452954.1 carbon-monoxide dehydrogenase large subunit -
FIU97_RS19505 () 214106..214981 + 876 WP_152456078.1 MoxR family ATPase -
FIU97_RS19510 () 214978..216159 + 1182 WP_152452958.1 VWA domain-containing protein -
FIU97_RS19515 () 216156..216935 + 780 WP_152452960.1 XdhC family protein -
FIU97_RS19520 () 217188..217385 + 198 Protein_198 hypothetical protein -
FIU97_RS19525 () 217418..219352 - 1935 WP_152452962.1 PhoX family phosphatase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance