MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 181301 bp
Accession: NZ_CP045341 Location: 1..181301 Organism: Vibrio sp. THAF190c Replicon: plasmid pTHAF190c_c
Accession: NZ_CP045341 Location: 1..181301 Organism: Vibrio sp. THAF190c Replicon: plasmid pTHAF190c_c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIV04_RS25205 () | 408..2423 | + | 2016 | WP_152471161.1 | hypothetical protein | - |
| FIV04_RS25210 () | 2501..3325 | + | 825 | WP_152471162.1 | hypothetical protein | - |
| FIV04_RS25215 () | 3531..4634 | + | 1104 | WP_152471163.1 | nucleotidyltransferase | - |
| FIV04_RS25220 () | 4636..6849 | + | 2214 | WP_152471164.1 | ThiF family adenylyltransferase | - |
| FIV04_RS25225 () | 6852..7901 | + | 1050 | WP_152471165.1 | SAVED domain-containing protein | - |
| FIV04_RS25230 () | 8335..10185 | + | 1851 | WP_152471166.1 | hypothetical protein | - |
| FIV04_RS25235 () | 10332..11966 | + | 1635 | WP_152471167.1 | ATP-binding protein | - |
| FIV04_RS25240 () | 12030..12413 | + | 384 | WP_152471168.1 | hypothetical protein | - |
| FIV04_RS25245 () | 12564..13337 | + | 774 | WP_152471169.1 | hypothetical protein | - |
| FIV04_RS25250 () | 13414..15051 | + | 1638 | WP_152471170.1 | hypothetical protein | - |
| FIV04_RS25255 () | 15309..16070 | + | 762 | WP_152471171.1 | sigma-70 family RNA polymerase sigma factor | - |
| FIV04_RS25260 () | 16705..17343 | + | 639 | WP_152471172.1 | TfoX/Sxy family DNA transformation protein | - |
| FIV04_RS25265 () | 17447..18406 | + | 960 | WP_152471173.1 | hypothetical protein | - |
| FIV04_RS25270 () | 18464..18835 | + | 372 | WP_152471174.1 | hypothetical protein | - |
| FIV04_RS25275 () | 18832..19095 | + | 264 | WP_152471175.1 | hypothetical protein | - |
| FIV04_RS25280 () | 19067..19435 | + | 369 | WP_152471176.1 | hypothetical protein | - |
| FIV04_RS25285 () | 19900..21282 | + | 1383 | WP_152471177.1 | trypsin-like serine protease | - |
| FIV04_RS25290 () | 21340..22134 | + | 795 | WP_152471178.1 | EAL domain-containing protein | - |
| FIV04_RS25295 () | 22143..23009 | + | 867 | WP_152471179.1 | hypothetical protein | - |
| FIV04_RS25300 () | 23018..23341 | - | 324 | WP_152471180.1 | hypothetical protein | - |
| FIV04_RS25305 () | 23356..25005 | - | 1650 | WP_152471181.1 | hypothetical protein | - |
| FIV04_RS25310 () | 25423..26307 | - | 885 | WP_172974333.1 | recombination-associated protein RdgC | - |
| FIV04_RS25315 () | 26466..26885 | + | 420 | WP_152471183.1 | hypothetical protein | - |
| FIV04_RS25320 () | 26890..27759 | + | 870 | WP_152471184.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| FIV04_RS25325 () | 28926..30851 | + | 1926 | WP_172974334.1 | DUF3346 domain-containing protein | - |
| FIV04_RS25330 () | 31669..32229 | + | 561 | WP_152471186.1 | hypothetical protein | - |
| FIV04_RS25335 () | 32334..32615 | + | 282 | WP_152471187.1 | hypothetical protein | - |
| FIV04_RS25340 () | 32773..33273 | + | 501 | WP_152471188.1 | hypothetical protein | - |
| FIV04_RS25345 () | 33356..33619 | + | 264 | WP_152471189.1 | hypothetical protein | - |
| FIV04_RS27050 () | 33784..33948 | + | 165 | WP_172974335.1 | hypothetical protein | - |
| FIV04_RS27055 () | 34011..34187 | + | 177 | WP_172974336.1 | hypothetical protein | - |
| FIV04_RS25350 () | 34507..35043 | + | 537 | WP_152471190.1 | hypothetical protein | - |
| FIV04_RS25355 () | 35093..35326 | + | 234 | WP_152471191.1 | hypothetical protein | - |
| FIV04_RS25360 () | 35380..35643 | - | 264 | WP_152471192.1 | hypothetical protein | - |
| FIV04_RS25365 () | 35640..35930 | - | 291 | WP_152471193.1 | hypothetical protein | - |
| FIV04_RS25370 () | 36276..36524 | + | 249 | WP_152471194.1 | hypothetical protein | - |
| FIV04_RS25375 () | 36533..36724 | + | 192 | WP_152471195.1 | hypothetical protein | - |
| FIV04_RS25380 () | 37181..37672 | + | 492 | WP_152471196.1 | hypothetical protein | - |
| FIV04_RS25385 () | 37793..38119 | + | 327 | WP_152471197.1 | hypothetical protein | - |
| FIV04_RS25390 () | 38249..39475 | + | 1227 | WP_152471198.1 | hypothetical protein | - |
| FIV04_RS25395 () | 39640..40554 | - | 915 | WP_152471199.1 | hypothetical protein | - |
| FIV04_RS25400 () | 41361..42272 | - | 912 | WP_152471200.1 | IS91 family transposase ISShvi3 | Transposase |
| FIV04_RS25405 () | 42615..43742 | + | 1128 | WP_152471201.1 | hypothetical protein | - |
| FIV04_RS25410 () | 43820..44923 | - | 1104 | WP_152471202.1 | hypothetical protein | - |
| FIV04_RS25415 () | 45103..45348 | - | 246 | WP_152471203.1 | DUF1496 domain-containing protein | - |
| FIV04_RS25420 () | 45442..46725 | - | 1284 | WP_152471204.1 | DUF4113 domain-containing protein | - |
| FIV04_RS25425 () | 46713..47423 | - | 711 | WP_152471205.1 | S24 family peptidase | - |
| FIV04_RS25430 () | 47611..47793 | + | 183 | WP_152471206.1 | hypothetical protein | - |
| FIV04_RS25435 () | 47854..48306 | + | 453 | WP_152471207.1 | hypothetical protein | - |
| FIV04_RS25440 () | 48537..48770 | + | 234 | WP_152471208.1 | hypothetical protein | - |
| FIV04_RS25445 () | 48947..49759 | + | 813 | WP_152471209.1 | DNA (cytosine-5-)-methyltransferase | - |
| FIV04_RS25450 () | 50076..50390 | - | 315 | WP_172974343.1 | CopG family transcriptional regulator | - |
| FIV04_RS25455 () | 50537..51055 | - | 519 | WP_152471211.1 | hypothetical protein | - |
| FIV04_RS25460 () | 51114..51653 | - | 540 | WP_152471334.1 | copper-binding protein | - |
| FIV04_RS25465 () | 51726..54851 | - | 3126 | WP_152471212.1 | efflux RND transporter permease subunit | - |
| FIV04_RS25470 () | 54848..56560 | - | 1713 | WP_152471213.1 | efflux RND transporter periplasmic adaptor subunit | - |
| FIV04_RS25475 () | 56574..57965 | - | 1392 | WP_152471214.1 | TolC family protein | - |
| FIV04_RS25480 () | 58057..58446 | - | 390 | WP_152471215.1 | hypothetical protein | - |
| FIV04_RS25485 () | 58553..59872 | - | 1320 | WP_152471216.1 | heavy metal sensor histidine kinase | - |
| FIV04_RS25490 () | 59869..60552 | - | 684 | WP_152471217.1 | Transcriptional regulatory protein CusR | VF |
| FIV04_RS25495 () | 60588..60923 | - | 336 | WP_152471218.1 | hypothetical protein | - |
| FIV04_RS25500 () | 61008..61388 | - | 381 | WP_152471219.1 | DUF3316 domain-containing protein | - |
| FIV04_RS25505 () | 61808..62032 | - | 225 | WP_152471220.1 | hypothetical protein | - |
| FIV04_RS25510 () | 62053..62340 | - | 288 | WP_152471221.1 | hypothetical protein | - |
| FIV04_RS25515 () | 62521..65241 | - | 2721 | WP_152471222.1 | Copper-exporting P-type ATPase | VF |
| FIV04_RS25520 () | 65243..65707 | - | 465 | WP_152471223.1 | MerR family DNA-binding protein | - |
| FIV04_RS25525 () | 66356..66973 | - | 618 | WP_152471224.1 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
| FIV04_RS25530 () | 66983..68014 | - | 1032 | WP_152471225.1 | type I-F CRISPR-associated protein Csy3 | - |
| FIV04_RS25535 () | 68028..70108 | - | 2081 | Protein_69 | hypothetical protein | - |
| FIV04_RS25540 () | 70111..71322 | - | 1212 | WP_152471226.1 | TniQ family protein | - |
| FIV04_RS25545 () | 71573..74053 | + | 2481 | WP_152471227.1 | PAS domain-containing protein | - |
| FIV04_RS25550 () | 74214..75593 | - | 1380 | WP_152471228.1 | DEAD/DEAH box helicase family protein | - |
| FIV04_RS25555 () | 75587..76132 | - | 546 | WP_152471229.1 | hypothetical protein | - |
| FIV04_RS25560 () | 76234..76548 | + | 315 | WP_152471230.1 | helix-turn-helix domain-containing protein | - |
| FIV04_RS25565 () | 76545..77639 | - | 1095 | WP_172974337.1 | TniB family NTP-binding protein | - |
| FIV04_RS25570 () | 77608..79473 | - | 1866 | WP_152471232.1 | DDE-type integrase/transposase/recombinase | - |
| FIV04_RS25575 () | 79476..80099 | - | 624 | WP_152471233.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| FIV04_RS27060 () | 80184..80327 | + | 144 | WP_172974338.1 | DNA cytosine methyltransferase | - |
| FIV04_RS25580 () | 80386..80886 | + | 501 | WP_152471234.1 | hypothetical protein | - |
| FIV04_RS25585 () | 80957..82960 | - | 2004 | WP_152471235.1 | hypothetical protein | - |
| FIV04_RS25590 () | 83348..83704 | + | 357 | WP_152471236.1 | hypothetical protein | - |
| FIV04_RS25595 () | 83701..84432 | + | 732 | WP_152471237.1 | hypothetical protein | - |
| FIV04_RS25600 () | 84685..85239 | + | 555 | WP_152471238.1 | Dna2/Cas4 domain-containing protein | - |
| FIV04_RS25605 () | 85685..86164 | + | 480 | WP_152471239.1 | hypothetical protein | - |
| FIV04_RS25610 () | 86421..87635 | + | 1215 | WP_152471240.1 | AAA family ATPase | - |
| FIV04_RS25615 () | 87708..88808 | + | 1101 | WP_152471241.1 | DUF3150 domain-containing protein | - |
| FIV04_RS25620 () | 88985..90121 | + | 1137 | WP_152471242.1 | DNA polymerase III subunit beta | - |
| FIV04_RS25625 () | 90452..90649 | + | 198 | WP_152471243.1 | hypothetical protein | - |
| FIV04_RS27065 () | 90823..90987 | + | 165 | WP_172974339.1 | hypothetical protein | - |
| FIV04_RS25635 () | 91201..91380 | + | 180 | WP_152471245.1 | hypothetical protein | - |
| FIV04_RS25640 () | 91583..91810 | + | 228 | WP_152471246.1 | hypothetical protein | - |
| FIV04_RS25645 () | 91829..92161 | + | 333 | WP_152471247.1 | hypothetical protein | - |
| FIV04_RS25650 () | 92413..92736 | + | 324 | WP_152471248.1 | hypothetical protein | - |
| FIV04_RS25655 () | 92952..94325 | + | 1374 | WP_152471249.1 | hypothetical protein | - |
| FIV04_RS25660 () | 94322..96019 | + | 1698 | WP_152471250.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FIV04_RS25665 () | 96030..97814 | + | 1785 | WP_152471251.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FIV04_RS25670 () | 97894..98463 | + | 570 | WP_152471252.1 | hypothetical protein | - |
| FIV04_RS25675 () | 98511..98786 | + | 276 | WP_152471253.1 | hypothetical protein | - |
| FIV04_RS25680 () | 98821..99084 | + | 264 | WP_152471254.1 | helix-turn-helix transcriptional regulator | - |
| FIV04_RS25685 () | 99308..100543 | + | 1236 | WP_152471255.1 | ParA family protein | - |
| FIV04_RS25690 () | 100540..101838 | + | 1299 | WP_152471256.1 | hypothetical protein | - |
| FIV04_RS25695 () | 102102..103352 | + | 1251 | WP_152471257.1 | hypothetical protein | - |
| FIV04_RS25700 () | 103513..104157 | + | 645 | WP_152471258.1 | hypothetical protein | - |
| FIV04_RS25705 () | 104162..105304 | + | 1143 | WP_152471259.1 | YqaJ viral recombinase family protein | - |
| FIV04_RS25710 () | 105621..106265 | + | 645 | WP_152471260.1 | hypothetical protein | - |
| FIV04_RS25715 () | 106453..107232 | + | 780 | WP_152471261.1 | hypothetical protein | - |
| FIV04_RS25720 () | 107320..109473 | + | 2154 | WP_152471262.1 | hypothetical protein | - |
| FIV04_RS25725 () | 109492..110211 | + | 720 | WP_152471263.1 | hypothetical protein | - |
| FIV04_RS25730 () | 111064..112077 | + | 1014 | WP_152471264.1 | hypothetical protein | - |
| FIV04_RS25735 () | 112079..113440 | + | 1362 | WP_152471265.1 | hypothetical protein | - |
| FIV04_RS25740 () | 113443..115008 | + | 1566 | WP_152471266.1 | hypothetical protein | - |
| FIV04_RS25745 () | 115020..116201 | + | 1182 | WP_152471267.1 | hypothetical protein | - |
| FIV04_RS25750 () | 116204..117019 | + | 816 | WP_152471268.1 | hypothetical protein | - |
| FIV04_RS25755 () | 117032..118681 | + | 1650 | WP_152471269.1 | Flp pilus assembly complex ATPase component TadA | - |
| FIV04_RS25760 () | 118685..119710 | + | 1026 | WP_152471270.1 | hypothetical protein | - |
| FIV04_RS25765 () | 119976..120485 | + | 510 | WP_152471271.1 | hypothetical protein | - |
| FIV04_RS25770 () | 120516..121034 | + | 519 | WP_152471272.1 | type II secretion system GspH family protein | - |
| FIV04_RS25775 () | 121041..122012 | + | 972 | WP_152471273.1 | hypothetical protein | - |
| FIV04_RS25780 () | 122024..122749 | + | 726 | WP_152471274.1 | thioredoxin domain-containing protein | - |
| FIV04_RS25785 () | 122755..123522 | + | 768 | WP_152471275.1 | DUF4400 domain-containing protein | - |
| FIV04_RS25790 () | 123642..123968 | + | 327 | WP_152471276.1 | hypothetical protein | - |
| FIV04_RS25795 () | 123961..124290 | + | 330 | WP_152471277.1 | DUF3262 family protein | - |
| FIV04_RS25800 () | 124307..124648 | + | 342 | WP_152471278.1 | DUF2976 domain-containing protein | - |
| FIV04_RS25805 () | 124659..125039 | + | 381 | WP_152471279.1 | DUF3487 family protein | - |
| FIV04_RS25810 () | 125045..125686 | + | 642 | WP_152471280.1 | TIGR03746 family integrating conjugative element protein | - |
| FIV04_RS25815 () | 125686..126471 | + | 786 | WP_152471281.1 | TIGR03749 family integrating conjugative element protein | - |
| FIV04_RS25820 () | 126616..128136 | + | 1521 | WP_152471282.1 | TIGR03752 family integrating conjugative element protein | - |
| FIV04_RS25825 () | 128130..128549 | + | 420 | WP_152471283.1 | hypothetical protein | - |
| FIV04_RS25830 () | 128546..131395 | + | 2850 | WP_152471284.1 | conjugative transfer ATPase | - |
| FIV04_RS25835 () | 131383..131922 | + | 540 | WP_152471285.1 | Outer membrane porin F | VF |
| FIV04_RS25840 () | 131922..132365 | + | 444 | WP_152471286.1 | DUF1525 domain-containing protein | - |
| FIV04_RS25845 () | 132368..133714 | + | 1347 | WP_152471287.1 | TraU family protein | - |
| FIV04_RS25850 () | 134007..134243 | + | 237 | WP_152471288.1 | hypothetical protein | - |
| FIV04_RS25855 () | 134320..134841 | + | 522 | WP_152471289.1 | hypothetical protein | - |
| FIV04_RS25860 () | 135246..137096 | + | 1851 | WP_152471290.1 | VWA domain-containing protein | - |
| FIV04_RS25865 () | 137175..138482 | + | 1308 | WP_172974340.1 | toprim domain-containing protein | - |
| FIV04_RS25870 () | 138579..139616 | + | 1038 | WP_152471292.1 | hypothetical protein | - |
| FIV04_RS25875 () | 140467..140874 | + | 408 | WP_152471293.1 | hypothetical protein | - |
| FIV04_RS25880 () | 140921..141637 | + | 717 | WP_152471294.1 | hypothetical protein | - |
| FIV04_RS25885 () | 141828..142427 | + | 600 | WP_152471295.1 | single-stranded DNA-binding protein | - |
| FIV04_RS25890 () | 143055..143684 | + | 630 | WP_152471296.1 | hypothetical protein | - |
| FIV04_RS25895 () | 143785..146544 | - | 2760 | WP_152471297.1 | hypothetical protein | Relaxase |
| FIV04_RS25900 () | 146572..146853 | + | 282 | WP_152471298.1 | hypothetical protein | - |
| FIV04_RS25905 () | 146898..147584 | + | 687 | WP_152471299.1 | hypothetical protein | - |
| FIV04_RS25910 () | 147581..147883 | + | 303 | WP_152471300.1 | hypothetical protein | - |
| FIV04_RS25915 () | 147873..148571 | + | 699 | WP_152471301.1 | hypothetical protein | - |
| FIV04_RS25920 () | 148568..149410 | + | 843 | WP_152471302.1 | DUF1845 family protein | - |
| FIV04_RS25925 () | 149946..150374 | + | 429 | WP_152471303.1 | hypothetical protein | - |
| FIV04_RS25930 () | 150391..151446 | + | 1056 | WP_152471304.1 | hypothetical protein | - |
| FIV04_RS25935 () | 151452..152249 | + | 798 | WP_152471305.1 | hypothetical protein | - |
| FIV04_RS25940 () | 152270..152878 | + | 609 | WP_152471306.1 | transglycosylase SLT domain-containing protein | - |
| FIV04_RS25945 () | 153065..153877 | + | 813 | WP_172974341.1 | DUF2859 domain-containing protein | - |
| FIV04_RS25950 () | 153874..156060 | + | 2187 | WP_152471308.1 | conjugative transfer system coupling protein TraD | - |
| FIV04_RS27070 () | 156613..156816 | - | 204 | WP_172974342.1 | hypothetical protein | - |
| FIV04_RS25955 () | 157076..157531 | + | 456 | WP_152471309.1 | hypothetical protein | - |
| FIV04_RS25960 () | 157536..157928 | + | 393 | WP_152471310.1 | hypothetical protein | - |
| FIV04_RS25965 () | 158006..158275 | + | 270 | WP_152471311.1 | hypothetical protein | - |
| FIV04_RS25970 () | 158436..158837 | - | 402 | WP_152471335.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FIV04_RS25975 () | 158851..159084 | - | 234 | WP_152471312.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| FIV04_RS25980 () | 159235..159786 | + | 552 | WP_152471313.1 | hypothetical protein | - |
| FIV04_RS25985 () | 159799..160143 | + | 345 | WP_152471314.1 | hypothetical protein | - |
| FIV04_RS25990 () | 160407..160718 | + | 312 | WP_152471315.1 | hypothetical protein | - |
| FIV04_RS25995 () | 161110..161946 | + | 837 | WP_152471316.1 | hypothetical protein | - |
| FIV04_RS26000 () | 162141..162473 | - | 333 | WP_152471317.1 | hypothetical protein | - |
| FIV04_RS26005 () | 162647..162807 | - | 161 | Protein_165 | ribose ABC transporter permease | - |
| FIV04_RS26010 () | 163098..163976 | + | 879 | WP_152471318.1 | hypothetical protein | - |
| FIV04_RS26015 () | 163982..164878 | + | 897 | WP_152471319.1 | DNA cytosine methyltransferase | - |
| FIV04_RS26020 () | 164985..165191 | + | 207 | WP_152471320.1 | hypothetical protein | - |
| FIV04_RS26025 () | 165316..165546 | + | 231 | WP_152471321.1 | hypothetical protein | - |
| FIV04_RS26030 () | 165668..166624 | + | 957 | WP_152471322.1 | hypothetical protein | - |
| FIV04_RS26035 () | 166728..167171 | + | 444 | WP_152471323.1 | phosphate ABC transporter substrate-binding protein | - |
| FIV04_RS26040 () | 167278..167511 | - | 234 | WP_152471324.1 | hypothetical protein | - |
| FIV04_RS26045 () | 167710..168015 | - | 306 | WP_152471325.1 | hypothetical protein | - |
| FIV04_RS26050 () | 168133..168453 | - | 321 | WP_152471326.1 | hypothetical protein | - |
| FIV04_RS26055 () | 168463..168657 | - | 195 | WP_152471327.1 | hypothetical protein | - |
| FIV04_RS26060 () | 168849..169106 | - | 258 | WP_152471328.1 | hypothetical protein | - |
| FIV04_RS26065 () | 169115..169543 | - | 429 | WP_152471329.1 | GIY-YIG nuclease family protein | - |
| FIV04_RS26070 () | 169552..169896 | - | 345 | WP_152471330.1 | hypothetical protein | - |
| FIV04_RS26075 () | 169901..170086 | - | 186 | WP_017086662.1 | hypothetical protein | - |
| FIV04_RS26080 () | 170137..170880 | - | 744 | WP_102258076.1 | hypothetical protein | - |
| FIV04_RS26085 () | 171084..171553 | - | 470 | Protein_181 | site-specific integrase | - |
| FIV04_RS26090 () | 171627..171929 | + | 303 | WP_152471331.1 | hypothetical protein | - |
| FIV04_RS26095 () | 172063..172305 | + | 243 | WP_152471332.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| FIV04_RS26100 () | 172339..172974 | - | 636 | WP_099166198.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FIV04_RS26105 () | 173117..173509 | + | 393 | WP_099166217.1 | Hg(II)-responsive transcriptional regulator | - |
| FIV04_RS26110 () | 173577..173924 | + | 348 | WP_099166197.1 | mercury transporter | - |
| FIV04_RS26115 () | 173949..174224 | + | 276 | WP_099166196.1 | mercury resistance system periplasmic binding protein MerP | - |
| FIV04_RS26120 () | 174231..174488 | + | 258 | WP_099166195.1 | mercury resistance system transport protein MerF | - |
| FIV04_RS26125 () | 174481..175977 | + | 1497 | WP_152468857.1 | mercury(II) reductase | - |
| FIV04_RS26130 () | 176066..179071 | + | 3006 | WP_152468856.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FIV04_RS26135 () | 179128..179427 | + | 300 | Protein_191 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|