MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120832 bp
Accession: NZ_CP045334 Location: 1..120832 Organism: Labrenzia sp. THAF191a Replicon: plasmid pTHAF191a_a
Accession: NZ_CP045334 Location: 1..120832 Organism: Labrenzia sp. THAF191a Replicon: plasmid pTHAF191a_a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIV05_RS27820 () | 164..628 | - | 465 | Protein_1 | CbtA family protein | - |
| FIV05_RS27825 () | 688..984 | - | 297 | WP_062492104.1 | conjugal transfer protein TrbD | - |
| FIV05_RS27830 () | 977..1336 | - | 360 | WP_152508073.1 | TrbC/VirB2 family protein | - |
| FIV05_RS27835 () | 1326..1727 | - | 402 | Protein_4 | Type IV secretion system protein VirB11 | VF |
| FIV05_RS27840 () | 1934..2215 | + | 282 | WP_062492108.1 | hypothetical protein | - |
| FIV05_RS27845 () | 2605..2859 | + | 255 | WP_062492109.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FIV05_RS27850 () | 2831..3280 | + | 450 | WP_152512500.1 | hypothetical protein | - |
| FIV05_RS27855 () | 3295..3528 | + | 234 | WP_152508075.1 | hypothetical protein | - |
| FIV05_RS27860 () | 3529..3975 | + | 447 | WP_152508076.1 | hypothetical protein | - |
| FIV05_RS27865 () | 3990..4442 | - | 453 | WP_152508077.1 | MucR family transcriptional regulator | - |
| FIV05_RS27870 () | 5082..6332 | + | 1251 | WP_152512499.1 | IS110 family transposase ISMpa1 | Transposase |
| FIV05_RS27875 () | 6912..7367 | + | 456 | WP_062492122.1 | hypothetical protein | - |
| FIV05_RS27880 () | 7371..8216 | + | 846 | WP_062492124.1 | methyltransferase | - |
| FIV05_RS27885 () | 8992..10800 | - | 1809 | WP_152508056.1 | phosphomethylpyrimidine synthase ThiC | - |
| FIV05_RS27890 () | 11287..12480 | + | 1194 | WP_088665297.1 | Sporulation initiation inhibitor protein Soj | VF |
| FIV05_RS27895 () | 12484..13485 | + | 1002 | WP_152508057.1 | plasmid partitioning protein RepB | - |
| FIV05_RS27900 () | 13709..14965 | + | 1257 | WP_062492133.1 | replication protein C | - |
| FIV05_RS27905 () | 15080..15322 | + | 243 | WP_082809967.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FIV05_RS27910 () | 15319..15726 | + | 408 | WP_062492135.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FIV05_RS27915 () | 15951..16157 | + | 207 | WP_062492137.1 | antitoxin VbhA family protein | - |
| FIV05_RS27920 () | 16222..17940 | + | 1719 | WP_152508058.1 | Fic family protein | - |
| FIV05_RS27925 () | 18216..18560 | + | 345 | WP_062492226.1 | DUF736 family protein | - |
| FIV05_RS27930 () | 18865..19152 | + | 288 | WP_062492139.1 | hypothetical protein | - |
| FIV05_RS27935 () | 19310..21238 | - | 1929 | WP_077294766.1 | Protein VirD4 | VF |
| FIV05_RS27940 () | 21159..21416 | - | 258 | WP_062492143.1 | conjugal transfer protein TraD | - |
| FIV05_RS27945 () | 21463..21714 | - | 252 | WP_062492145.1 | hypothetical protein | - |
| FIV05_RS27950 () | 22026..23168 | - | 1143 | WP_152508066.1 | hypothetical protein | - |
| FIV05_RS27955 () | 23385..26762 | + | 3378 | WP_152508012.1 | Mobilization protein A | Relaxase |
| FIV05_RS27960 () | 26648..27316 | + | 669 | WP_152508013.1 | conjugative transfer signal peptidase TraF | - |
| FIV05_RS27965 () | 27237..28475 | + | 1239 | WP_077294757.1 | conjugal transfer protein TraB | - |
| FIV05_RS27970 () | 28480..29106 | + | 627 | WP_062492152.1 | conjugal transfer protein TraH | - |
| FIV05_RS27975 () | 29103..29471 | + | 369 | WP_062492154.1 | thermonuclease family protein | - |
| FIV05_RS27980 () | 29468..29692 | - | 225 | WP_062492156.1 | helix-turn-helix domain-containing protein | - |
| FIV05_RS27985 () | 30007..30723 | - | 717 | WP_152508014.1 | hypothetical protein | - |
| FIV05_RS27990 () | 30724..33450 | - | 2727 | WP_152508054.1 | N-6 DNA methylase | - |
| FIV05_RS27995 () | 33604..33798 | - | 195 | WP_062492162.1 | hypothetical protein | - |
| FIV05_RS28000 () | 34245..35357 | + | 1113 | WP_173014041.1 | radical SAM protein | - |
| FIV05_RS28005 () | 35354..35938 | + | 585 | WP_062492232.1 | 3'-5' exonuclease | - |
| FIV05_RS28010 () | 35935..36519 | + | 585 | WP_152508015.1 | AAA family ATPase | - |
| FIV05_RS28015 () | 36584..38014 | + | 1431 | WP_062492166.1 | HD domain-containing protein | - |
| FIV05_RS28020 () | 38382..39227 | - | 846 | WP_152508016.1 | DUF1194 domain-containing protein | - |
| FIV05_RS28025 () | 39255..39635 | - | 381 | WP_152508017.1 | DUF1232 domain-containing protein | - |
| FIV05_RS28030 () | 39977..41401 | - | 1425 | WP_152508018.1 | ISNCY family transposase ISRel10 | Transposase |
| FIV05_RS28035 () | 41584..42579 | - | 996 | WP_077294751.1 | IS30 family transposase ISRssp4 | Transposase |
| FIV05_RS28040 () | 42742..43620 | - | 879 | WP_152508043.1 | Ribokinase | VF |
| FIV05_RS28045 () | 43627..44499 | - | 873 | WP_152508042.1 | MurR/RpiR family transcriptional regulator | - |
| FIV05_RS28050 () | 44496..45470 | - | 975 | WP_152508041.1 | ABC transporter permease | - |
| FIV05_RS28055 () | 45476..46996 | - | 1521 | WP_152508040.1 | Ribose import ATP-binding protein RbsA | VF |
| FIV05_RS28060 () | 47065..48111 | - | 1047 | WP_152508039.1 | substrate-binding domain-containing protein | - |
| FIV05_RS28065 () | 48142..49131 | - | 990 | WP_152508038.1 | TIM barrel protein | - |
| FIV05_RS28070 () | 49233..49778 | - | 546 | Protein_51 | NAD(P)H-dependent oxidoreductase | - |
| FIV05_RS28075 () | 49703..50341 | - | 639 | WP_050474501.1 | CDGSH iron-sulfur domain-containing protein | - |
| FIV05_RS28080 () | 50451..51650 | - | 1200 | WP_050474500.1 | 3-oxoadipyl-CoA thiolase | - |
| FIV05_RS28085 () | 51675..52601 | - | 927 | WP_152508037.1 | FAD-binding protein | - |
| FIV05_RS28090 () | 52603..53364 | - | 762 | WP_050474498.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| FIV05_RS28095 () | 53433..54188 | - | 756 | WP_050474497.1 | Cyclopentanol dehydrogenase | VF |
| FIV05_RS28100 () | 54281..55918 | - | 1638 | WP_050474496.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FIV05_RS28105 () | 56036..56938 | - | 903 | WP_050474495.1 | Monoterpene epsilon-lactone hydrolase | VF |
| FIV05_RS28110 () | 57131..59206 | - | 2076 | WP_050474494.1 | FAD-dependent oxidoreductase | - |
| FIV05_RS28115 () | 59215..60669 | - | 1455 | WP_173014040.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| FIV05_RS28120 () | 60845..61636 | + | 792 | WP_050474493.1 | IclR family transcriptional regulator | - |
| FIV05_RS28125 () | 61651..62814 | + | 1164 | WP_050474492.1 | acyl-CoA dehydrogenase family protein | - |
| FIV05_RS28130 () | 62832..63986 | + | 1155 | WP_152508055.1 | iron-containing alcohol dehydrogenase | - |
| FIV05_RS28135 () | 63986..65188 | + | 1203 | WP_152508036.1 | CoA transferase | - |
| FIV05_RS28140 () | 65185..66123 | + | 939 | Protein_65 | Transposon Tn10 TetD protein | VF |
| FIV05_RS28145 () | 66228..66580 | + | 353 | Protein_66 | hypothetical protein | - |
| FIV05_RS28150 () | 66664..68409 | - | 1746 | WP_173014039.1 | arsenical pump-driving ATPase | - |
| FIV05_RS28155 () | 68642..69739 | + | 1098 | WP_152508034.1 | Fic family protein | - |
| FIV05_RS28160 () | 69872..70219 | + | 348 | WP_074556315.1 | IS66 family transposase ISAli15 | Transposase |
| FIV05_RS28165 () | 70216..70563 | + | 348 | WP_152508033.1 | IS66 family transposase ISAzs18 | Transposase |
| FIV05_RS28170 () | 70623..71147 | + | 525 | WP_152508032.1 | IS66 family transposase ISPre3 | Transposase |
| FIV05_RS28175 () | 71137..71655 | - | 519 | WP_077294832.1 | thermonuclease family protein | - |
| FIV05_RS28180 () | 71815..72351 | - | 537 | WP_077294835.1 | Rrf2 family transcriptional regulator | - |
| FIV05_RS28185 () | 72357..73700 | - | 1344 | WP_152508030.1 | hypothetical protein | - |
| FIV05_RS28190 () | 74349..75362 | + | 1014 | WP_152508029.1 | Type IV secretion system protein PtlH | VF |
| FIV05_RS28195 () | 75352..75711 | + | 360 | WP_152508028.1 | TrbC/VirB2 family protein | - |
| FIV05_RS28200 () | 75704..76000 | + | 297 | WP_077294672.1 | conjugal transfer protein TrbD | - |
| FIV05_RS28205 () | 76003..78450 | + | 2448 | WP_152508027.1 | conjugal transfer protein TrbE | - |
| FIV05_RS28210 () | 78428..79222 | + | 795 | WP_152508026.1 | P-type conjugative transfer protein TrbJ | - |
| FIV05_RS28215 () | 79227..79469 | + | 243 | WP_152508025.1 | hypothetical protein | - |
| FIV05_RS28220 () | 79490..80707 | + | 1218 | WP_152508024.1 | P-type conjugative transfer protein TrbL | - |
| FIV05_RS28225 () | 80723..81385 | + | 663 | WP_062492203.1 | conjugal transfer protein TrbF | - |
| FIV05_RS28230 () | 81415..82248 | + | 834 | WP_152508023.1 | P-type conjugative transfer protein TrbG | - |
| FIV05_RS28235 () | 82245..82715 | + | 471 | WP_152508022.1 | conjugal transfer protein TrbH | - |
| FIV05_RS28240 () | 82728..84071 | + | 1344 | WP_152508021.1 | Type IV secretion system protein PtlG | VF |
| FIV05_RS28245 () | 84357..84836 | - | 480 | WP_152508020.1 | hypothetical protein | - |
| FIV05_RS28250 () | 85024..86808 | - | 1785 | WP_152508019.1 | HAMP domain-containing protein | - |
| FIV05_RS28255 () | 87497..88412 | - | 916 | Protein_88 | DMT family transporter | - |
| FIV05_RS28260 () | 89016..89699 | + | 684 | WP_152508044.1 | SOS response-associated peptidase | - |
| FIV05_RS28265 () | 89724..90023 | + | 300 | WP_152508045.1 | hypothetical protein | - |
| FIV05_RS28270 () | 90130..90471 | + | 342 | WP_152508046.1 | hypothetical protein | - |
| FIV05_RS31715 () | 91042..91206 | + | 165 | WP_173014038.1 | hypothetical protein | - |
| FIV05_RS28275 () | 91284..91916 | - | 633 | WP_152508047.1 | zeta toxin family protein | - |
| FIV05_RS31720 () | 91929..92096 | - | 168 | WP_165222187.1 | hypothetical protein | - |
| FIV05_RS28280 () | 92270..92617 | + | 348 | WP_152508048.1 | hypothetical protein | - |
| FIV05_RS28285 () | 92982..93500 | - | 519 | WP_152508049.1 | helix-turn-helix transcriptional regulator | - |
| FIV05_RS28290 () | 94178..97147 | - | 2970 | WP_072495413.1 | Tn3 family transposase TnpA_ISAcsp1 | Transposase |
| FIV05_RS28295 () | 97163..97768 | - | 606 | WP_055971942.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| FIV05_RS28300 () | 98126..98686 | - | 561 | WP_040450256.1 | L,D-transpeptidase | - |
| FIV05_RS28305 () | 99278..101413 | + | 2136 | WP_081450442.1 | cadmium-translocating P-type ATPase | - |
| FIV05_RS28310 () | 101763..102515 | + | 753 | WP_008188302.1 | DUF1624 domain-containing protein | - |
| FIV05_RS28315 () | 102555..103535 | - | 981 | WP_040450304.1 | murein L,D-transpeptidase | - |
| FIV05_RS28320 () | 103785..104369 | - | 585 | WP_040450252.1 | DedA family protein | - |
| FIV05_RS28325 () | 105004..105528 | + | 525 | WP_134853290.1 | transglutaminase-like cysteine peptidase | - |
| FIV05_RS28330 () | 105693..106436 | - | 744 | WP_173014037.1 | phosphonate ABC transporter, permease protein PhnE | - |
| FIV05_RS28335 () | 106436..107206 | - | 771 | WP_077294817.1 | Phosphate-import ATP-binding protein PhnC | VF |
| FIV05_RS28340 () | 107203..108060 | - | 858 | WP_008188307.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| FIV05_RS28345 () | 108060..109913 | - | 1854 | WP_152512501.1 | cytochrome C | - |
| FIV05_RS28350 () | 110033..110488 | + | 456 | WP_062492097.1 | Transcriptional regulator MntR | VF |
| FIV05_RS28355 () | 110858..111247 | + | 390 | WP_209010120.1 | hypothetical protein | - |
| FIV05_RS28360 () | 111376..112494 | + | 1119 | WP_152508068.1 | IS110 family transposase ISMtsp6 | Transposase |
| FIV05_RS28365 () | 112811..113248 | + | 438 | WP_152508069.1 | IS66 family transposase IS66 | Transposase |
| FIV05_RS28370 () | 113245..113592 | + | 348 | WP_152508070.1 | IS66 family transposase IS66 | Transposase |
| FIV05_RS28375 () | 113638..115284 | + | 1647 | WP_152508071.1 | IS66 family transposase IS66 | Transposase |
| FIV05_RS28380 () | 115281..115925 | + | 645 | WP_152508072.1 | plasmid pRiA4b ORF-3 family protein | - |
| FIV05_RS28385 () | 115965..116471 | + | 507 | Protein_116 | phosphatase PAP2 family protein | - |
| FIV05_RS28390 () | 116759..118762 | - | 2004 | WP_062492224.1 | Murein DD-endopeptidase MepM | VF |
| FIV05_RS28395 () | 118877..119530 | - | 654 | WP_062492099.1 | thioredoxin domain-containing protein | - |
| FIV05_RS28400 () | 120065..120391 | + | 327 | WP_077294808.1 | DUF1636 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|