MGE detailed information
MGE type: Prophage MGE length: 54275 bp
Accession: NZ_CP045277 Location: 3710475..3764749 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Accession: NZ_CP045277 Location: 3710475..3764749 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBF15_RS18005 () | 3705607..3707805 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| GBF15_RS18010 () | 3707815..3708771 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| GBF15_RS18015 () | 3708750..3709160 | + | 411 | WP_001111348.1 | hypothetical protein | - |
| GBF15_RS18020 () | 3709667..3710098 | + | 432 | WP_000749408.1 | hypothetical protein | - |
| GBF15_RS18030 () | 3711720..3712052 | - | 333 | WP_069905221.1 | FlxA-like family protein | - |
| GBF15_RS18035 () | 3712255..3712470 | - | 216 | Protein_3484 | hypothetical protein | - |
| GBF15_RS18040 () | 3712908..3714797 | + | 1890 | WP_032193087.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| GBF15_RS18045 () | 3714899..3715021 | - | 123 | Protein_3486 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| GBF15_RS18050 () | 3715048..3715422 | + | 375 | WP_023147383.1 | hypothetical protein | - |
| GBF15_RS18055 () | 3715422..3715865 | + | 444 | WP_001515122.1 | tail fiber assembly protein | - |
| GBF15_RS18060 () | 3715837..3716247 | - | 411 | WP_001515121.1 | tail assembly chaperone | - |
| GBF15_RS18065 () | 3716247..3717173 | - | 927 | WP_039000333.1 | hypothetical protein | - |
| GBF15_RS18070 () | 3717177..3717761 | - | 585 | WP_000383536.1 | YmfQ family protein | - |
| GBF15_RS18075 () | 3717752..3718810 | - | 1059 | WP_023147736.1 | baseplate J/gp47 family protein | - |
| GBF15_RS18080 () | 3718797..3719222 | - | 426 | WP_016244980.1 | phage GP46 family protein | - |
| GBF15_RS18085 () | 3719222..3719770 | - | 549 | WP_001259084.1 | phage baseplate assembly protein V | - |
| GBF15_RS18090 () | 3719770..3720849 | - | 1080 | WP_000999511.1 | baseplate protein | - |
| GBF15_RS18095 () | 3720846..3722174 | - | 1329 | WP_032193238.1 | DNA circularization N-terminal domain-containing protein | - |
| GBF15_RS18100 () | 3722235..3724070 | - | 1836 | WP_016244982.1 | phage tail tape measure protein | - |
| GBF15_RS18110 () | 3724212..3724481 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| GBF15_RS18115 () | 3724481..3724837 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| GBF15_RS18120 () | 3724837..3726333 | - | 1497 | WP_016244983.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| GBF15_RS18125 () | 3726317..3726487 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| GBF15_RS18130 () | 3726496..3727056 | - | 561 | WP_016244984.1 | hypothetical protein | - |
| GBF15_RS18135 () | 3727053..3727559 | - | 507 | WP_000213503.1 | hypothetical protein | - |
| GBF15_RS18140 () | 3727534..3727944 | - | 411 | WP_023147732.1 | phage head closure protein | - |
| GBF15_RS18145 () | 3727941..3728264 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| GBF15_RS18150 () | 3728267..3728467 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| GBF15_RS18155 () | 3728517..3729722 | - | 1206 | WP_000257519.1 | phage major capsid protein | - |
| GBF15_RS18160 () | 3729737..3730387 | - | 651 | WP_016244986.1 | HK97 family phage prohead protease | - |
| GBF15_RS18165 () | 3730365..3731606 | - | 1242 | WP_023147731.1 | phage portal protein | - |
| GBF15_RS18170 () | 3731606..3731788 | - | 183 | WP_000605606.1 | hypothetical protein | - |
| GBF15_RS18175 () | 3731800..3733296 | - | 1497 | WP_123010488.1 | terminase large subunit | - |
| GBF15_RS18180 () | 3733530..3734024 | - | 495 | WP_000929173.1 | phage terminase small subunit P27 family | - |
| GBF15_RS18185 () | 3734150..3734500 | - | 351 | WP_021519684.1 | HNH endonuclease | - |
| GBF15_RS18190 () | 3734558..3735064 | - | 507 | WP_021519683.1 | hypothetical protein | - |
| GBF15_RS18200 () | 3735402..3735794 | - | 393 | WP_032193237.1 | DUF2570 domain-containing protein | - |
| GBF15_RS18205 () | 3735778..3736254 | - | 477 | WP_016236818.1 | glycoside hydrolase family protein | - |
| GBF15_RS18210 () | 3736258..3736593 | - | 336 | WP_001120501.1 | phage holin, lambda family | - |
| GBF15_RS18215 () | 3736730..3737023 | - | 294 | WP_001449601.1 | site-specific DNA-methyltransferase | - |
| GBF15_RS18220 () | 3737302..3737535 | - | 234 | WP_001310393.1 | hypothetical protein | - |
| GBF15_RS18225 () | 3737679..3738218 | - | 540 | WP_000484663.1 | hypothetical protein | - |
| GBF15_RS18230 () | 3738433..3739185 | - | 753 | WP_021519680.1 | antitermination protein | - |
| GBF15_RS18235 () | 3739199..3740188 | - | 990 | WP_089502964.1 | DUF968 domain-containing protein | - |
| GBF15_RS18240 () | 3740196..3740993 | - | 798 | WP_001061403.1 | KilA-N domain-containing protein | - |
| GBF15_RS18245 () | 3741013..3741402 | - | 390 | WP_000767095.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GBF15_RS18250 () | 3741399..3741725 | - | 327 | WP_021549921.1 | LexA repressor | - |
| GBF15_RS18255 () | 3741722..3742375 | - | 654 | WP_015364417.1 | phage N-6-adenine-methyltransferase | - |
| GBF15_RS18260 () | 3742375..3742869 | - | 495 | WP_072176118.1 | PerC family transcriptional regulator | - |
| GBF15_RS18265 () | 3742866..3743807 | - | 942 | WP_000104954.1 | helix-turn-helix domain-containing protein | - |
| GBF15_RS18270 () | 3743797..3743976 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| GBF15_RS18275 () | 3744152..3744703 | - | 552 | WP_001434539.1 | hypothetical protein | - |
| GBF15_RS18280 () | 3744741..3744941 | - | 201 | WP_000205494.1 | cell division protein | - |
| GBF15_RS18285 () | 3745039..3745665 | + | 627 | WP_000450735.1 | LexA family transcriptional regulator | - |
| GBF15_RS18290 () | 3745851..3746147 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| GBF15_RS18305 () | 3746824..3747360 | + | 537 | WP_000008202.1 | 5'-deoxynucleotidase | - |
| GBF15_RS18310 () | 3747351..3747713 | + | 363 | WP_001242749.1 | phage protein | - |
| GBF15_RS18315 () | 3747713..3748009 | + | 297 | WP_001519505.1 | hypothetical protein | - |
| GBF15_RS18325 () | 3748236..3749399 | + | 1164 | WP_000051893.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GBF15_RS18335 () | 3749604..3750857 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| GBF15_RS18340 () | 3750869..3751972 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| GBF15_RS18345 () | 3752260..3753315 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| GBF15_RS18350 () | 3753354..3753755 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| GBF15_RS18355 () | 3753813..3755057 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3754473..3754553 | - | 81 | NuclAT_12 | - | - |
| - () | 3754473..3754553 | - | 81 | NuclAT_12 | - | - |
| - () | 3754473..3754553 | - | 81 | NuclAT_12 | - | - |
| - () | 3754473..3754553 | - | 81 | NuclAT_12 | - | - |
| GBF15_RS18360 () | 3755149..3755607 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| GBF15_RS18365 () | 3755868..3757325 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| GBF15_RS18370 () | 3757382..3757903 | - | 522 | Protein_3545 | peptide chain release factor H | - |
| GBF15_RS18375 () | 3757899..3758105 | - | 207 | Protein_3546 | RtcB family protein | - |
| GBF15_RS18380 () | 3758423..3758875 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| GBF15_RS18385 () | 3758885..3759283 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| GBF15_RS18390 () | 3759286..3759579 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| GBF15_RS18395 () | 3759631..3760686 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| GBF15_RS18400 () | 3760757..3761542 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| GBF15_RS18405 () | 3761487..3763226 | + | 1740 | WP_001334802.1 | Flagellar biosynthesis protein FlhA | VF |
| GBF15_RS18410 () | 3763450..3763947 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| GBF15_RS18415 () | 3764123..3764872 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| GBF15_RS18420 () | 3765082..3765342 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| GBF15_RS18425 () | 3765345..3765623 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| GBF15_RS18430 () | 3765779..3766519 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| GBF15_RS18435 () | 3766490..3767257 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| GBF15_RS18440 () | 3767463..3768041 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|