MGE detailed information
MGE type: Genomic_island MGE length: 14146 bp
Accession: NZ_CP045277 Location: 2373798..2387943 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Accession: NZ_CP045277 Location: 2373798..2387943 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBF15_RS11570 () | 2373798..2374064 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| GBF15_RS11575 () | 2374064..2375386 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| GBF15_RS11580 () | 2375698..2375906 | + | 209 | Protein_2232 | helix-turn-helix transcriptional regulator | - |
| GBF15_RS11585 () | 2376161..2377387 | + | 1227 | Protein_2233 | Outer membrane usher protein FimD | VF |
| GBF15_RS11590 () | 2377401..2377664 | + | 264 | Protein_2234 | Protein FimF | VF |
| GBF15_RS11595 () | 2377756..2378984 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| GBF15_RS11600 () | 2378995..2379267 | + | 273 | Protein_2236 | Protein FimF | VF |
| GBF15_RS11605 () | 2379280..2379783 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| GBF15_RS11610 () | 2379842..2380756 | + | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| GBF15_RS11615 () | 2381090..2383369 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| GBF15_RS11620 () | 2383617..2383814 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| GBF15_RS11625 () | 2383889..2384650 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| GBF15_RS11630 () | 2385052..2386734 | + | 1683 | WP_001295684.1 | sulfatase | - |
| GBF15_RS11635 () | 2386786..2387943 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| GBF15_RS11640 () | 2387909..2388031 | - | 123 | WP_120795387.1 | protein YneP | - |
| GBF15_RS11645 () | 2388234..2389205 | + | 972 | WP_131199880.1 | ABC transporter ATP-binding protein/permease | - |
| GBF15_RS11655 () | 2390431..2391180 | + | 750 | Protein_2247 | ABC transporter ATP-binding protein/permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |