MGE detailed information
MGE type: Prophage MGE length: 26409 bp
Accession: NZ_CP045277 Location: 2308053..2334461 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Accession: NZ_CP045277 Location: 2308053..2334461 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBF15_RS11140 () | 2303304..2304014 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| GBF15_RS11145 () | 2304017..2304577 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| GBF15_RS11150 () | 2304612..2304953 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| GBF15_RS11155 () | 2305088..2305414 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| GBF15_RS11160 () | 2305620..2306834 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| GBF15_RS11165 () | 2306846..2307865 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| GBF15_RS11170 () | 2307923..2308033 | + | 111 | WP_072276620.1 | transporter | - |
| GBF15_RS11175 () | 2308053..2309333 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| GBF15_RS11180 () | 2309368..2309619 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| GBF15_RS11185 () | 2309692..2311674 | - | 1983 | Protein_2155 | 3'-5' exoribonuclease | - |
| GBF15_RS11190 () | 2311664..2311915 | + | 252 | Protein_2156 | DUF977 family protein | - |
| GBF15_RS11195 () | 2311912..2312268 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| GBF15_RS25495 () | 2312879..2313166 | + | 288 | Protein_2158 | hypothetical protein | - |
| GBF15_RS11210 () | 2313935..2315248 | + | 1314 | WP_069905218.1 | ISNCY family transposase ISCARN112 | Transposase |
| GBF15_RS11215 () | 2315698..2316906 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| GBF15_RS11220 () | 2317005..2317337 | - | 333 | WP_069905221.1 | FlxA-like family protein | - |
| GBF15_RS11225 () | 2317540..2317845 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| GBF15_RS11230 () | 2317870..2318109 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GBF15_RS11235 () | 2318109..2318396 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GBF15_RS11240 () | 2318468..2318623 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GBF15_RS11245 () | 2318840..2319091 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| GBF15_RS11250 () | 2319158..2319436 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| GBF15_RS11255 () | 2319438..2320487 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| GBF15_RS11260 () | 2320501..2321253 | + | 753 | WP_001047135.1 | antitermination protein | - |
| GBF15_RS11265 () | 2321531..2321620 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| GBF15_RS11270 () | 2321675..2321887 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| GBF15_RS11275 () | 2322188..2322403 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| GBF15_RS11280 () | 2323157..2323372 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| GBF15_RS11285 () | 2323377..2323688 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| GBF15_RS11290 () | 2323685..2324218 | + | 534 | WP_001092971.1 | lysozyme | - |
| GBF15_RS11295 () | 2324215..2324712 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| GBF15_RS11300 () | 2325075..2325287 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GBF15_RS11305 () | 2325298..2325486 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| GBF15_RS11310 () | 2325489..2325554 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| GBF15_RS11315 () | 2325634..2325789 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| GBF15_RS11320 () | 2325961..2326134 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| GBF15_RS11325 () | 2326286..2326696 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| GBF15_RS11330 () | 2326754..2326987 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| GBF15_RS11335 () | 2327376..2327921 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| GBF15_RS11340 () | 2327879..2328205 | + | 327 | Protein_2185 | phage tail protein | - |
| GBF15_RS11345 () | 2328172..2328480 | + | 309 | WP_071524888.1 | phage tail protein | - |
| GBF15_RS11350 () | 2328480..2329055 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| GBF15_RS11355 () | 2329178..2330386 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| GBF15_RS11360 () | 2330475..2331065 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GBF15_RS11365 () | 2331382..2331513 | - | 132 | WP_032293154.1 | hypothetical protein | - |
| GBF15_RS11370 () | 2331543..2332240 | - | 698 | Protein_2191 | IS1 family transposase | - |
| GBF15_RS11375 () | 2332294..2332392 | - | 99 | Protein_2192 | cold shock protein YdfK | - |
| GBF15_RS11380 () | 2332461..2332574 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| GBF15_RS11385 () | 2333178..2334461 | + | 1284 | Protein_2194 | MHS family MFS transporter YdfJ | - |
| GBF15_RS11390 () | 2334550..2336010 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| GBF15_RS11395 () | 2336045..2336248 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GBF15_RS11400 () | 2336425..2337111 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| GBF15_RS11405 () | 2337200..2337946 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|