MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85113 bp
Accession: NZ_CP045217 Location: 1..85113 Organism: Pantoea dispersa strain BJQ0007 Replicon: plasmid unnamed1
Accession: NZ_CP045217 Location: 1..85113 Organism: Pantoea dispersa strain BJQ0007 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAY20_RS20480 () | 653..1851 | + | 1199 | Protein_0 | transposase | - |
| GAY20_RS20485 () | 1874..2089 | - | 216 | WP_152391579.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GAY20_RS20490 () | 2168..3439 | - | 1272 | WP_004118485.1 | Y-family DNA polymerase | - |
| GAY20_RS20495 () | 3439..3864 | - | 426 | WP_152391580.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GAY20_RS20500 () | 4077..4307 | + | 231 | WP_004118481.1 | hypothetical protein | - |
| GAY20_RS20510 () | 4830..5255 | + | 426 | WP_135692390.1 | antirestriction protein | - |
| GAY20_RS20515 () | 5492..5746 | + | 255 | WP_152391581.1 | DNA polymerase III subunit theta | - |
| GAY20_RS20520 () | 5781..6098 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| GAY20_RS20530 () | 6882..7109 | + | 228 | WP_004118469.1 | hypothetical protein | - |
| GAY20_RS20535 () | 7201..7431 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| GAY20_RS20540 () | 7483..8838 | + | 1356 | WP_152391582.1 | DUF3560 domain-containing protein | - |
| GAY20_RS20545 () | 8886..9449 | + | 564 | WP_130979841.1 | methyltransferase | - |
| GAY20_RS20560 () | 10260..11228 | - | 969 | WP_013815101.1 | IS5 family transposase | - |
| GAY20_RS20570 () | 11347..11781 | + | 435 | WP_032416767.1 | cell envelope integrity protein TolA | - |
| GAY20_RS20575 () | 12020..12286 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GAY20_RS20580 () | 12274..12756 | + | 483 | WP_152391583.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GAY20_RS20585 () | 12980..13777 | + | 798 | WP_193718043.1 | hypothetical protein | - |
| GAY20_RS20590 () | 13826..14230 | + | 405 | WP_152391584.1 | helix-turn-helix domain-containing protein | - |
| GAY20_RS20595 () | 14628..14842 | - | 215 | Protein_18 | hypothetical protein | - |
| GAY20_RS20605 () | 15500..16468 | + | 969 | WP_013815101.1 | IS5 family transposase | - |
| GAY20_RS20610 () | 16672..17007 | + | 336 | WP_032416808.1 | TonB family protein | - |
| GAY20_RS20615 () | 17482..18123 | + | 642 | WP_152391585.1 | hypothetical protein | - |
| GAY20_RS20625 () | 18435..19403 | + | 969 | WP_013815101.1 | IS5 family transposase | - |
| GAY20_RS20635 () | 19977..20933 | + | 957 | WP_193718044.1 | IS5 family transposase | - |
| GAY20_RS20640 () | 20990..21424 | - | 435 | Protein_24 | PTS sugar transporter subunit IIC | - |
| GAY20_RS20645 () | 21439..21909 | - | 471 | WP_038628583.1 | PTS sugar transporter subunit IIB | - |
| GAY20_RS20650 () | 21925..22347 | - | 423 | WP_038628585.1 | PTS sugar transporter subunit IIA | - |
| GAY20_RS20655 () | 22437..25199 | - | 2763 | WP_152391609.1 | sigma-54-dependent transcriptional regulator | - |
| GAY20_RS20660 () | 25391..26380 | + | 990 | WP_152391587.1 | transglycosylase SLT domain-containing protein | - |
| GAY20_RS20665 () | 26488..27507 | - | 1020 | WP_152391610.1 | hypothetical protein | - |
| GAY20_RS20670 () | 27579..28349 | - | 771 | WP_152391588.1 | hypothetical protein | - |
| GAY20_RS20675 () | 28832..29800 | - | 969 | WP_013815101.1 | IS5 family transposase | - |
| GAY20_RS20680 () | 29882..30874 | + | 993 | WP_152391589.1 | sigma-54 dependent transcriptional regulator | - |
| GAY20_RS20685 () | 31042..31281 | + | 240 | WP_152391590.1 | hypothetical protein | - |
| GAY20_RS20690 () | 31349..31720 | + | 372 | WP_038628597.1 | AraC family transcriptional regulator | - |
| GAY20_RS20695 () | 31726..32502 | + | 777 | WP_152391591.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| GAY20_RS20700 () | 32499..33065 | + | 567 | WP_152391592.1 | serine kinase | - |
| GAY20_RS20705 () | 33052..33654 | + | 603 | WP_038628601.1 | type III secretion system stator protein SctL | - |
| GAY20_RS20710 () | 33729..33956 | + | 228 | WP_038628603.1 | HrpF protein | - |
| GAY20_RS20715 () | 34067..36121 | + | 2055 | WP_104951622.1 | type III secretion system outer membrane ring subunit SctC | - |
| GAY20_RS20720 () | 36130..36318 | + | 189 | WP_102752010.1 | type III secretion protein HrpT | - |
| GAY20_RS20725 () | 36505..41880 | + | 5376 | WP_152391593.1 | AvrE-family type 3 secretion system effector | - |
| GAY20_RS20730 () | 41893..42324 | + | 432 | WP_038628609.1 | type III secretion system chaperone | - |
| GAY20_RS20735 () | 42451..43536 | - | 1086 | WP_102752012.1 | type III secretion system export apparatus subunit SctU | - |
| GAY20_RS20740 () | 43529..44344 | - | 816 | WP_038628614.1 | type III secretion system export apparatus subunit SctT | - |
| GAY20_RS20745 () | 44344..44604 | - | 261 | WP_038628616.1 | type III secretion system export apparatus subunit SctS | - |
| GAY20_RS20750 () | 44612..45268 | - | 657 | WP_180978474.1 | type III secretion system export apparatus subunit SctR | - |
| GAY20_RS20755 () | 45272..45607 | - | 336 | WP_193718040.1 | FliM/FliN family flagellar motor switch protein | - |
| GAY20_RS20760 () | 45673..46311 | - | 639 | WP_152391595.1 | hypothetical protein | - |
| GAY20_RS20765 () | 46308..46970 | - | 663 | WP_152391596.1 | hypothetical protein | - |
| GAY20_RS20770 () | 46967..47422 | - | 456 | WP_152391597.1 | type III secretion protein | - |
| GAY20_RS20775 () | 47406..48761 | - | 1356 | WP_102752017.1 | type III secretion system ATPase SctN | - |
| GAY20_RS20780 () | 48755..49615 | - | 861 | WP_102752018.1 | type III secretion protein | - |
| GAY20_RS20785 () | 49615..51825 | - | 2211 | WP_038628627.1 | FHIPEP family type III secretion protein | - |
| GAY20_RS20790 () | 51850..52968 | - | 1119 | WP_102752020.1 | type III secretion system gatekeeper subunit SctW | - |
| GAY20_RS20795 () | 53255..53800 | + | 546 | WP_152391598.1 | RNA polymerase sigma factor | - |
| GAY20_RS20800 () | 53916..55400 | + | 1485 | WP_102752022.1 | PAS domain S-box protein | - |
| GAY20_RS20805 () | 55408..56049 | + | 642 | WP_084971144.1 | response regulator transcription factor | - |
| GAY20_RS20810 () | 56128..58497 | - | 2370 | WP_152391599.1 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| GAY20_RS20815 () | 58501..59877 | - | 1377 | WP_152391600.1 | MFS transporter | - |
| GAY20_RS20825 () | 60264..61232 | + | 969 | WP_193717981.1 | IS5 family transposase | - |
| GAY20_RS20830 () | 61274..61846 | - | 573 | WP_152391601.1 | isochorismatase family protein | - |
| GAY20_RS20835 () | 61911..62348 | - | 438 | WP_152391602.1 | MarR family transcriptional regulator | - |
| GAY20_RS21615 () | 62502..62813 | - | 312 | WP_193718041.1 | hypothetical protein | - |
| GAY20_RS20845 () | 63061..63954 | + | 894 | WP_152391603.1 | SDR family oxidoreductase | - |
| GAY20_RS20850 () | 64272..65021 | + | 750 | WP_152391604.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GAY20_RS20855 () | 65021..66214 | + | 1194 | WP_152391605.1 | TCR/Tet family MFS transporter | - |
| GAY20_RS20860 () | 66535..66675 | + | 141 | Protein_67 | transposase | - |
| GAY20_RS20865 () | 66789..67757 | - | 969 | WP_193717978.1 | IS5-like element IS903B family transposase | - |
| GAY20_RS21620 () | 67833..68147 | - | 315 | WP_041937755.1 | hypothetical protein | - |
| GAY20_RS21625 () | 68151..68434 | - | 284 | Protein_70 | hypothetical protein | - |
| GAY20_RS20880 () | 68544..69500 | - | 957 | WP_193718042.1 | Abi family protein | - |
| GAY20_RS20885 () | 69806..71982 | - | 2177 | Protein_72 | pilA-like protein | - |
| GAY20_RS20890 () | 71983..73071 | - | 1089 | WP_152391611.1 | transcriptional regulator | - |
| GAY20_RS20900 () | 73625..73987 | + | 363 | WP_152391607.1 | hypothetical protein | - |
| GAY20_RS20905 () | 74005..74469 | + | 465 | Protein_75 | hypothetical protein | - |
| GAY20_RS20915 () | 74501..75469 | + | 969 | WP_193717978.1 | IS5-like element IS903B family transposase | - |
| GAY20_RS20920 () | 75527..75880 | + | 354 | Protein_77 | hypothetical protein | - |
| GAY20_RS20930 () | 76445..78118 | + | 1674 | WP_152391608.1 | DNA repair protein | - |
| GAY20_RS20935 () | 78349..78615 | + | 267 | WP_024144810.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GAY20_RS21630 () | 78727..78933 | + | 207 | Protein_80 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GAY20_RS20945 () | 79265..80005 | + | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| GAY20_RS20950 () | 80703..81713 | - | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| GAY20_RS20955 () | 82464..83630 | + | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| GAY20_RS20960 () | 83630..84601 | + | 972 | WP_004206785.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|