NZ_CP0452141..169291

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 169291 bp
Accession: NZ_CP045214        Location: 1..169291         Organism: Escherichia coli strain EH41       Replicon: plasmid pO113-EH41


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GC231_RS24635 (GC231_24845) 1..1032 - 1032 WP_000907876.1 plasmid replication initiator RepA -
GC231_RS24640 (GC231_24855) 1734..2375 + 642 WP_000335846.1 transcription termination/antitermination NusG family protein -
GC231_RS24645 (GC231_24860) 2516..3181 + 666 WP_011310076.1 transfer protein C -
GC231_RS24650 (GC231_24870) 3448..4068 + 621 WP_000176499.1 DUF1449 family protein -
GC231_RS24655 (GC231_24875) 4095..5789 + 1695 WP_000482662.1 flotillin family protein -
GC231_RS24660 (GC231_24880) 5870..6112 + 243 WP_011310077.1 PilI type IV pilus biogenesis protein -
GC231_RS24665 (GC231_24885) 6262..6564 + 303 Protein_6 hypothetical protein -
GC231_RS24670 (GC231_24890) 6721..7791 + 1071 WP_001170190.1 hypothetical protein VF
GC231_RS24675 (GC231_24895) 7796..8233 + 438 WP_000539684.1 type IV pilus biogenesis protein PilM -
GC231_RS24680 (GC231_24900) 8264..9883 + 1620 WP_001034996.1 Outer membrane lipoprotein BfpB VF
GC231_RS24685 (GC231_24905) 9904..11199 + 1296 WP_000129891.1 type 4b pilus protein PilO2 -
GC231_RS24690 (GC231_24910) 11189..11641 + 453 WP_001112923.1 type IV pilus biogenesis protein PilP -
GC231_RS24695 (GC231_24915) 11726..13234 + 1509 WP_000886636.1 Toxin coregulated pilus biosynthesis protein T VF
GC231_RS24700 (GC231_24920) 13236..14336 + 1101 WP_000670139.1 Toxin coregulated pilus biosynthesis protein E VF
GC231_RS24705 (GC231_24925) 14502..14945 + 444 WP_011310079.1 type 4 pilus major pilin -
GC231_RS24710 (GC231_24930) 14999..15472 + 474 WP_000870986.1 hypothetical protein VF
GC231_RS24715 (GC231_24935) 15491..16126 + 636 WP_000478595.1 prepilin peptidase -
GC231_RS24720 (GC231_24940) 16131..17495 + 1365 WP_001168071.1 hypothetical protein VF
GC231_RS24725 (GC231_24950) 17753..17911 + 159 Protein_18 integrase -
GC231_RS24730 (GC231_24955) 17953..18243 + 291 WP_000681897.1 hypothetical protein -
GC231_RS24735 (GC231_24960) 18335..18655 - 321 WP_000695056.1 hypothetical protein -
GC231_RS24740 (GC231_24965) 18915..19736 + 822 WP_000804094.1 hypothetical protein -
GC231_RS24745 (GC231_24970) 19826..21027 + 1202 Protein_22 conjugal transfer protein TraF -
GC231_RS24750 (GC231_24975) 21386..21838 + 453 WP_001081198.1 DotD/TraH family lipoprotein -
GC231_RS24755 (GC231_24980) 21835..22671 + 837 WP_000848138.1 hypothetical protein VF
GC231_RS24760 (GC231_24985) 22655..23803 + 1149 WP_000625247.1 putative protein YggR VF
GC231_RS24765 (GC231_24990) 23800..24090 + 291 WP_000817799.1 hypothetical protein -
GC231_RS24770 (GC231_24995) 24154..28170 + 4017 WP_011310080.1 DUF5710 domain-containing protein -
GC231_RS24775 (GC231_25000) 28187..28537 + 351 WP_001056369.1 hypothetical protein -
GC231_RS24780 (GC231_25005) 28549..29244 + 696 WP_001287263.1 DotI/IcmL family type IV secretion protein -
GC231_RS24785 (GC231_25010) 29255..30229 + 975 WP_001165562.1 hypothetical protein VF
GC231_RS24790 (GC231_25015) 30233..31564 + 1332 WP_011310082.1 conjugal transfer protein TraO -
GC231_RS24795 (GC231_25020) 31561..32274 + 714 WP_000787005.1 conjugal transfer protein TraP -
GC231_RS24800 (GC231_25025) 32271..32801 + 531 WP_000987018.1 conjugal transfer protein TraQ -
GC231_RS24805 (GC231_25030) 32848..33246 + 399 WP_000086066.1 hypothetical protein -
GC231_RS24810 33303..33455 + 153 Protein_35 TraS -
GC231_RS24815 (GC231_25040) 33469..34287 + 819 WP_011310084.1 hypothetical protein -
GC231_RS24820 34342..34491 + 150 WP_011310085.1 hypothetical protein -
GC231_RS24825 (GC231_25045) 34698..35081 + 384 WP_011310086.1 hypothetical protein -
GC231_RS24830 (GC231_25050) 35256..38300 + 3045 WP_011310087.1 nucleotide-binding protein -
GC231_RS24835 (GC231_25055) 38300..38917 + 618 WP_000286857.1 hypothetical protein -
GC231_RS24840 (GC231_25060) 38878..40083 + 1206 WP_011310088.1 conjugal transfer protein TraW -
GC231_RS24845 (GC231_25065) 40080..40649 + 570 WP_000650755.1 conjugal transfer protein TraX -
GC231_RS24850 (GC231_25070) 40722..42887 + 2166 WP_000691805.1 DotA/TraY family protein -
GC231_RS24855 (GC231_25075) 42958..43608 + 651 WP_001098359.1 plasmid IncI1-type surface exclusion protein ExcA -
GC231_RS24860 (GC231_25080) 43882..45468 + 1587 WP_220401202.1 sigma factor-like helix-turn-helix DNA-binding protein -
GC231_RS24865 (GC231_25085) 45606..45758 - 153 WP_001367784.1 Hok/Gef family protein -
GC231_RS24870 (GC231_25090) 46092..46334 + 243 WP_001398505.1 hypothetical protein -
GC231_RS24875 (GC231_25095) 46427..47962 - 1536 WP_172682410.1 phosphoethanolamine transferase -
GC231_RS24880 (GC231_25100) 48163..48618 - 456 WP_001205143.1 DUF2569 family protein -
GC231_RS24885 (GC231_25105) 48706..49329 - 624 WP_011310093.1 hypothetical protein -
GC231_RS24890 (GC231_25110) 49488..49901 + 414 WP_000598952.1 thermonuclease family protein -
GC231_RS24895 (GC231_25115) 50348..54427 + 4080 WP_011310094.1 Serine protease SepA autotransporter VF
GC231_RS25650 54675..54800 - 126 WP_001344629.1 hypothetical protein -
GC231_RS24900 (GC231_25125) 54934..55299 + 366 WP_011310096.1 hypothetical protein -
GC231_RS24905 (GC231_25130) 55309..55500 + 192 WP_000264906.1 hypothetical protein -
GC231_RS24910 (GC231_25135) 55528..55839 + 312 WP_000203481.1 hypothetical protein -
GC231_RS24915 (GC231_25150) 56622..57893 + 1272 WP_000121915.1 IncI1-type conjugal transfer protein TrbA -
GC231_RS24920 (GC231_25155) 57890..59008 + 1119 WP_011310097.1 DsbC family protein -
GC231_RS24925 (GC231_25160) 58989..61292 + 2304 WP_000077655.1 F-type conjugative transfer protein TrbC -
GC231_RS24930 (GC231_25165) 61418..61720 + 303 WP_000334995.1 hypothetical protein -
GC231_RS24935 (GC231_25170) 61818..62249 - 432 WP_001335086.1 cell envelope integrity TolA C-terminal domain-containing protein -
GC231_RS24940 (GC231_25175) 62317..65028 - 2712 WP_011310099.1 Protein TraI Relaxase
GC231_RS24945 (GC231_25180) 65040..65372 - 333 WP_001291058.1 plasmid mobilization protein MobA -
GC231_RS24950 (GC231_25185) 65603..65938 + 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
GC231_RS24955 (GC231_25190) 66023..66871 - 849 WP_001077013.1 DUF4942 domain-containing protein -
GC231_RS24960 (GC231_25200) 67124..67906 - 783 WP_228400317.1 IS21 family transposase IS100kyp Transposase
GC231_RS24965 (GC231_25205) 67903..68925 - 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
GC231_RS24970 (GC231_25220) 69409..69660 + 252 WP_000148286.1 helix-turn-helix transcriptional regulator -
GC231_RS24975 (GC231_25225) 69691..69924 - 234 WP_001370006.1 hypothetical protein -
GC231_RS24980 (GC231_25230) 69924..70850 - 927 WP_000038346.1 Recombination-promoting nuclease RpnA VF
GC231_RS24985 (GC231_25235) 70915..71181 - 267 WP_001247860.1 hypothetical protein -
GC231_RS24990 (GC231_25240) 71274..71708 - 435 WP_000218847.1 hypothetical protein -
GC231_RS24995 (GC231_25255) 72440..72940 - 501 WP_000117617.1 antirestriction protein ArdA -
GC231_RS25000 (GC231_25265) 73410..74006 - 597 WP_000978008.1 hypothetical protein -
GC231_RS25005 (GC231_25270) 74003..74722 - 720 WP_001276261.1 plasmid SOS inhibition protein A -
GC231_RS25010 (GC231_25275) 74719..75153 - 435 WP_000845900.1 conjugation system SOS inhibitor PsiB -
GC231_RS25015 (GC231_25280) 75208..77166 - 1959 WP_000117306.1 ParB/RepB/Spo0J family partition protein -
GC231_RS25020 (GC231_25285) 77226..77459 - 234 WP_000006027.1 DUF905 domain-containing protein -
GC231_RS25025 (GC231_25290) 77517..78050 - 534 WP_001276132.1 single-stranded DNA-binding protein -
GC231_RS25030 78487..78840 - 354 WP_001367791.1 hypothetical protein -
GC231_RS25035 (GC231_25305) 78803..78994 - 192 WP_001027507.1 hypothetical protein -
GC231_RS25040 (GC231_25310) 78994..79413 - 420 WP_000271737.1 DUF1380 family protein -
GC231_RS25045 (GC231_25315) 79460..79885 - 426 WP_001198919.1 antirestriction protein -
GC231_RS25050 (GC231_25330) 80299..81069 - 771 WP_001006218.1 hypothetical protein -
GC231_RS25055 (GC231_25335) 81137..81631 - 495 Protein_85 DUF1380 family protein -
GC231_RS25060 (GC231_25340) 81561..81782 - 222 WP_011310104.1 hypothetical protein -
GC231_RS25065 (GC231_25345) 81783..82466 - 684 WP_000086114.1 DNA methylase -
GC231_RS25070 (GC231_25350) 82543..82836 - 294 WP_011310106.1 hypothetical protein -
GC231_RS25075 (GC231_25355) 82840..83742 - 903 WP_077629773.1 DUF1281 domain-containing protein -
GC231_RS25080 (GC231_25365) 84161..84409 + 249 WP_000618108.1 DinI-like family protein -
GC231_RS25085 (GC231_25370) 84406..84843 + 438 WP_011310108.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
GC231_RS25090 (GC231_25375) 84843..86113 + 1271 Protein_92 translesion error-prone DNA polymerase V subunit UmuC -
GC231_RS25095 (GC231_25385) 86317..86943 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
GC231_RS25100 86940..87242 + 303 WP_001245884.1 hypothetical protein -
GC231_RS25105 (GC231_25400) 87647..87898 + 252 WP_031322317.1 hypothetical protein -
GC231_RS25110 (GC231_25405) 87898..88488 + 591 WP_000194580.1 hypothetical protein -
GC231_RS25115 (GC231_25410) 88508..88855 - 348 WP_000142449.1 DUF6404 family protein -
GC231_RS25120 (GC231_25415) 88974..89321 + 348 WP_000762580.1 colicin E1 family microcin immunity protein -
GC231_RS25125 (GC231_25420) 89339..91219 - 1881 WP_001283355.1 colicin Ia central receptor-binding domain-containing protein -
GC231_RS25130 (GC231_25425) 91498..92190 - 693 Protein_100 hypothetical protein -
GC231_RS25135 (GC231_25430) 92186..92395 - 210 Protein_101 IS21 family transposase IS21 Transposase
GC231_RS25140 (GC231_25440) 92892..94865 + 1974 WP_011310110.1 Hemin receptor VF
GC231_RS25145 (GC231_25445) 94884..95675 + 792 WP_000977390.1 DUF4198 domain-containing protein -
GC231_RS25150 (GC231_25455) 96180..96599 + 420 WP_011310111.1 IS66 family transposase ISEc23 Transposase
GC231_RS25155 (GC231_25460) 96596..96946 + 351 WP_000624657.1 IS66 family transposase IS682 Transposase
GC231_RS25160 (GC231_25465) 96977..98568 + 1592 Protein_106 IS66 family transposase ISEc47 Transposase
GC231_RS25165 (GC231_25470) 98598..98771 + 174 Protein_107 DUF4113 domain-containing protein -
GC231_RS25170 (GC231_25475) 98773..99189 - 417 WP_001278809.1 plasmid partitioning/stability family protein -
GC231_RS25175 (GC231_25480) 99182..100162 - 981 WP_000688508.1 plasmid segregation protein ParM -
GC231_RS25180 (GC231_25485) 100577..100885 - 309 WP_000030199.1 hypothetical protein -
GC231_RS25185 (GC231_25490) 100972..101616 - 645 WP_001144036.1 ParA family protein -
GC231_RS25190 (GC231_25495) 101796..102602 - 807 WP_000016966.1 site-specific integrase -
GC231_RS25195 (GC231_25500) 102603..102908 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
GC231_RS25200 (GC231_25505) 102910..103128 - 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
GC231_RS25205 (GC231_25510) 103724..103984 + 261 WP_000343100.1 hypothetical protein -
GC231_RS25210 (GC231_25515) 103981..104571 + 591 WP_000194569.1 hypothetical protein -
GC231_RS25215 (GC231_25520) 104589..104936 - 348 WP_000142427.1 DUF6404 family protein -
GC231_RS25220 (GC231_25525) 105419..105790 - 372 WP_001373114.1 colicin-like pore-forming protein -
GC231_RS25225 (GC231_25530) 105850..106581 - 732 WP_000850414.1 conjugal transfer complement resistance protein TraT -
GC231_RS25230 (GC231_25540) 106853..106963 - 111 Protein_120 IS481 family transposase -
GC231_RS25235 (GC231_25545) 106967..107184 - 218 Protein_121 hypothetical protein -
GC231_RS25240 (GC231_25555) 107747..108724 + 978 WP_011310114.1 RepB family plasmid replication initiator protein -
GC231_RS25245 (GC231_25560) 109009..109721 - 713 Protein_123 tyrosine-type recombinase/integrase -
GC231_RS25250 (GC231_25565) 109785..111011 - 1227 Protein_124 ISL3 family transposase -
GC231_RS25255 (GC231_25570) 111165..111413 - 249 WP_011310117.1 hypothetical protein -
GC231_RS25260 (GC231_25580) 111543..111866 - 324 WP_231367753.1 Transcriptional repressor MprA VF
GC231_RS25265 111915..112091 - 177 Protein_127 Transcriptional repressor MprA VF
GC231_RS25270 (GC231_25585) 112158..113597 - 1440 WP_001213534.1 Hemolysin secretion protein D, chromosomal VF
GC231_RS25275 (GC231_25590) 113601..115721 - 2121 WP_172682411.1 Alpha-hemolysin translocation ATP-binding protein HlyB VF
GC231_RS25280 (GC231_25595) 115771..118767 - 2997 WP_011310119.1 Hemolysin, chromosomal VF
GC231_RS25285 (GC231_25600) 118769..119284 - 516 WP_001365635.1 RTX-I toxin-activating lysine-acyltransferase ApxIC VF
GC231_RS25290 (GC231_25610) 119712..120515 - 804 WP_000899428.1 Outer membrane protein A VF
GC231_RS25295 (GC231_25615) 120540..124835 - 4296 WP_011310120.1 Autotransporter adhesin SadA VF
GC231_RS25300 (GC231_25620) 125056..125340 - 285 WP_000439678.1 Major pilu subunit operon regulatory protein PapB VF
GC231_RS25305 (GC231_25630) 125947..126494 + 548 Protein_135 transposase -
GC231_RS25310 (GC231_25640) 126824..127258 + 435 Protein_136 IS110 family transposase ISEc21 Transposase
GC231_RS25315 (GC231_25645) 127345..128882 + 1538 Protein_137 IS3 family transposase -
GC231_RS25320 (GC231_25650) 128987..129616 + 630 Protein_138 transposase -
GC231_RS25325 (GC231_25655) 129636..129984 + 349 Protein_139 integrase core domain-containing protein -
GC231_RS25330 (GC231_25660) 130349..131905 + 1557 WP_000554411.1 L-lactate permease -
GC231_RS25335 (GC231_25665) 131956..132675 + 720 WP_001102093.1 (Fe-S)-binding protein -
GC231_RS25340 (GC231_25670) 132686..134101 + 1416 WP_000054160.1 LutB/LldF family L-lactate oxidation iron-sulfur protein -
GC231_RS25345 (GC231_25675) 134106..134804 + 699 WP_000431492.1 lactate utilization protein C -
GC231_RS25350 (GC231_25680) 134845..135081 - 237 WP_001369996.1 hypothetical protein -
GC231_RS25355 (GC231_25685) 135152..135613 - 462 Protein_145 IS3 family transposase ISEcB1 Transposase
GC231_RS25360 (GC231_25690) 135729..136040 - 312 WP_000203483.1 hypothetical protein -
GC231_RS25365 (GC231_25695) 136068..136259 - 192 WP_000264906.1 hypothetical protein -
GC231_RS25370 (GC231_25700) 136269..136634 - 366 WP_044527404.1 hypothetical protein -
GC231_RS25655 136768..136893 + 126 WP_001344629.1 hypothetical protein -
GC231_RS25375 (GC231_25710) 137141..141043 - 3903 Protein_150 Serine protease EspP VF
GC231_RS25380 (GC231_25715) 141513..141926 - 414 WP_000598952.1 thermonuclease family protein -
GC231_RS25385 (GC231_25720) 142085..142762 + 678 WP_011310127.1 hypothetical protein -
GC231_RS25390 (GC231_25730) 143252..143572 - 321 WP_001373084.1 hypothetical protein -
GC231_RS25395 (GC231_25735) 143630..144778 - 1149 Protein_154 IS3 family transposase -
GC231_RS25400 144845..144934 - 90 Protein_155 transposase -
GC231_RS25405 (GC231_25740) 145188..146792 + 1605 WP_135301417.1 Adhesin YadA VF
GC231_RS25410 (GC231_25745) 147001..148092 + 1092 Protein_157 IS3 family transposase -
GC231_RS25415 (GC231_25755) 148400..150487 + 2088 WP_001223214.1 bifunctional siderophore receptor/adhesin Iha -
GC231_RS25420 (GC231_25760) 150748..151170 - 423 WP_001212725.1 Exc2 family lipoprotein -
GC231_RS25425 (GC231_25765) 151505..151672 - 168 Protein_160 IS110 family transposase -
GC231_RS25430 (GC231_25770) 151749..151937 + 189 Protein_161 IS66 family transposase IS682 Transposase
GC231_RS25435 (GC231_25775) 151941..152150 - 210 Protein_162 hypothetical protein -
GC231_RS25440 (GC231_25780) 152221..152646 - 426 WP_001373081.1 subtilase AB5 cytotoxin subunit B -
GC231_RS25445 (GC231_25785) 152663..153706 - 1044 WP_000912970.1 subtilase AB5 cytotoxin subunit A -
GC231_RS25450 (GC231_25790) 153760..154724 - 965 Protein_165 transposase -
GC231_RS25455 (GC231_25795) 154755..155103 - 349 Protein_166 IS66 family transposase IS682 Transposase
GC231_RS25460 (GC231_25800) 155100..155525 - 426 WP_000435654.1 IS66 family transposase IS682 Transposase
GC231_RS25465 (GC231_25810) 155830..156015 - 186 WP_071531845.1 CPCC family cysteine-rich protein -
GC231_RS25470 (GC231_25815) 156015..157313 - 1299 Protein_169 VENN motif pre-toxin domain-containing protein -
GC231_RS25475 (GC231_25820) 157569..157742 + 174 Protein_170 Tn3 family transposase -
GC231_RS25480 (GC231_25825) 157939..158933 + 995 Protein_171 IS110 family transposase IS4321 Transposase
GC231_RS25485 (GC231_25830) 159281..159541 - 261 WP_000038919.1 hypothetical protein -
GC231_RS25490 (GC231_25835) 159534..167630 - 8097 Protein_173 tRNA nuclease CdiA VF
GC231_RS25495 (GC231_25840) 168083..168322 - 240 WP_011310132.1 winged helix-turn-helix transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance