MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 139018 bp
Accession: NZ_CP045213 Location: 4126052..4265069 Organism: Escherichia coli strain EH41 Replicon: chromosome
Accession: NZ_CP045213 Location: 4126052..4265069 Organism: Escherichia coli strain EH41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GC231_RS20210 (4121309) | 4121309..4122049 | - | 741 | WP_001367953.1 | outer membrane beta-barrel protein | - |
| GC231_RS20215 (4122482) | 4122482..4124308 | + | 1827 | WP_001106666.1 | two-component system sensor histidine kinase AtoS | - |
| GC231_RS20220 (4124305) | 4124305..4125690 | + | 1386 | WP_000125284.1 | acetoacetate metabolism transcriptional regulator AtoC | - |
| GC231_RS20225 (4125886) | 4125886..4126548 | + | 663 | WP_000850528.1 | acetate CoA-transferase subunit alpha | - |
| GC231_RS20230 (4126548) | 4126548..4127198 | + | 651 | WP_000339054.1 | acetate CoA-transferase subunit beta | - |
| GC231_RS20235 (4127195) | 4127195..4128517 | + | 1323 | WP_000580275.1 | TIGR00366 family protein | - |
| GC231_RS20240 (4128548) | 4128548..4129732 | + | 1185 | WP_000786522.1 | acetyl-CoA acetyltransferase | - |
| GC231_RS20245 (4130142) | 4130142..4130795 | - | 654 | Protein_3941 | IS66 family transposase ISEc23 | Transposase |
| GC231_RS20250 (4131066) | 4131066..4131304 | + | 239 | Protein_3942 | IS66 family insertion sequence element accessory protein TnpB | - |
| GC231_RS20260 (4132118) | 4132118..4132311 | + | 194 | Protein_3943 | hypothetical protein | - |
| GC231_RS25625 (4132672) | 4132672..4132800 | + | 129 | WP_001304210.1 | IS3 family transposase ISKpn1 | Transposase |
| GC231_RS20265 (4132855) | 4132855..4132982 | + | 128 | Protein_3945 | IS3 family transposase | - |
| GC231_RS20270 (4133113) | 4133113..4133449 | - | 337 | Protein_3946 | hypothetical protein | - |
| GC231_RS20275 (4134086) | 4134086..4134307 | - | 222 | WP_000477612.1 | hypothetical protein | - |
| GC231_RS20280 (4135221) | 4135221..4136384 | + | 1164 | Protein_3948 | IS3 family transposase ISEc17 | Transposase |
| GC231_RS20285 (4137023) | 4137023..4139110 | + | 2088 | WP_001223359.1 | bifunctional siderophore receptor/adhesin Iha | - |
| GC231_RS20290 (4139251) | 4139251..4139442 | - | 192 | Protein_3950 | IS256 family transposase ISEic2 | Transposase |
| GC231_RS20295 (4139456) | 4139456..4141300 | - | 1845 | WP_220401214.1 | Vitamin B12 transporter BtuB | VF |
| GC231_RS20300 (4142201) | 4142201..4142458 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| GC231_RS20305 (4142527) | 4142527..4144224 | - | 1698 | WP_000401036.1 | sulfatase | - |
| GC231_RS20310 (4144319) | 4144319..4145455 | - | 1137 | WP_001228923.1 | hypothetical protein | VF |
| GC231_RS20315 (4146132) | 4146132..4146340 | + | 209 | Protein_3955 | IS66 family insertion sequence element accessory protein TnpB | - |
| GC231_RS20320 (4146327) | 4146327..4146516 | + | 190 | Protein_3956 | IS66 family insertion sequence element accessory protein TnpB | - |
| GC231_RS20325 (4146519) | 4146519..4146707 | - | 189 | WP_000520190.1 | DUF1187 family protein | - |
| GC231_RS20330 (4147230) | 4147230..4147371 | + | 142 | Protein_3958 | IS481 family transposase | - |
| GC231_RS20335 (4148076) | 4148076..4148330 | + | 255 | WP_000004411.1 | helix-turn-helix transcriptional regulator | - |
| GC231_RS20340 (4149229) | 4149229..4153320 | + | 4092 | WP_228400272.1 | hypothetical protein | VF |
| GC231_RS25630 (4153567) | 4153567..4153692 | - | 126 | WP_001344629.1 | hypothetical protein | - |
| GC231_RS20345 (4153826) | 4153826..4154191 | + | 366 | WP_000997728.1 | hypothetical protein | - |
| GC231_RS20350 (4154201) | 4154201..4154392 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| GC231_RS20355 (4154426) | 4154426..4154635 | + | 210 | WP_000323309.1 | hypothetical protein | - |
| GC231_RS20360 (4154662) | 4154662..4155021 | - | 360 | Protein_3965 | IS66 family transposase ISCro1 | Transposase |
| GC231_RS20365 (4155133) | 4155133..4155777 | - | 645 | WP_001378814.1 | hypothetical protein | - |
| GC231_RS20370 (4155798) | 4155798..4156067 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| GC231_RS20375 (4156146) | 4156146..4156784 | - | 639 | WP_000502848.1 | ParB N-terminal domain-containing protein | - |
| GC231_RS20380 (4156769) | 4156769..4158001 | - | 1233 | WP_001285503.1 | phosphoadenosine phosphosulfate reductase | - |
| GC231_RS20385 (4158501) | 4158501..4161182 | - | 2682 | WP_220401208.1 | AAA domain-containing protein | - |
| GC231_RS20390 (4161423) | 4161423..4161603 | - | 181 | Protein_3971 | hypothetical protein | VF |
| GC231_RS25635 (4161982) | 4161982..4162140 | - | 159 | Protein_3972 | hypothetical protein | VF |
| GC231_RS20400 (4162299) | 4162299..4162604 | - | 306 | WP_032279885.1 | hypothetical protein | - |
| GC231_RS20405 (4162670) | 4162670..4164415 | - | 1746 | WP_024200930.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| GC231_RS20410 (4164593) | 4164593..4165168 | - | 576 | WP_000737515.1 | hypothetical protein | VF |
| GC231_RS20415 (4165247) | 4165247..4165711 | - | 465 | Protein_3976 | type VI secretion system baseplate subunit TssE | - |
| GC231_RS20420 (4165712) | 4165712..4165954 | - | 243 | WP_000993065.1 | hypothetical protein | - |
| GC231_RS20425 (4165961) | 4165961..4166233 | - | 273 | WP_000906734.1 | hypothetical protein | - |
| GC231_RS20430 (4166368) | 4166368..4166643 | - | 276 | WP_000549471.1 | hypothetical protein | - |
| GC231_RS20435 (4166672) | 4166672..4166855 | + | 184 | Protein_3980 | transposase domain-containing protein | - |
| GC231_RS20440 (4166897) | 4166897..4167424 | - | 528 | WP_000182867.1 | hypothetical protein | - |
| GC231_RS20445 (4167856) | 4167856..4169389 | - | 1534 | Protein_3982 | IS3 family transposase | - |
| GC231_RS20450 (4169712) | 4169712..4169936 | - | 225 | WP_001378804.1 | hypothetical protein | - |
| GC231_RS20455 (4170073) | 4170073..4170327 | - | 255 | WP_001222075.1 | hypothetical protein | - |
| GC231_RS20460 (4170324) | 4170324..4179278 | - | 8955 | WP_228400273.1 | hypothetical protein | VF |
| GC231_RS20465 (4179294) | 4179294..4179821 | - | 528 | WP_220401210.1 | hypothetical protein | VF |
| GC231_RS20470 (4179831) | 4179831..4180910 | - | 1080 | WP_228400316.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| GC231_RS20475 (4180908) | 4180908..4181483 | - | 576 | Protein_3988 | POTRA domain-containing protein | - |
| GC231_RS20480 (4182159) | 4182159..4182350 | + | 192 | WP_001287885.1 | DUF4222 domain-containing protein | - |
| GC231_RS20485 (4182403) | 4182403..4182636 | - | 234 | WP_000124190.1 | hypothetical protein | - |
| GC231_RS20490 (4182732) | 4182732..4183355 | - | 624 | WP_001366001.1 | hypothetical protein | - |
| GC231_RS20495 (4183444) | 4183444..4183941 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| GC231_RS25640 (4184110) | 4184110..4184238 | - | 129 | WP_001379180.1 | hypothetical protein | - |
| GC231_RS20500 (4184291) | 4184291..4184857 | - | 567 | WP_000287898.1 | inovirus-type Gp2 protein | - |
| GC231_RS20505 (4184885) | 4184885..4185082 | - | 198 | WP_000553835.1 | inovirus-type Gp2 protein | - |
| GC231_RS20510 (4185331) | 4185331..4185756 | - | 426 | WP_001013762.1 | putative zinc ribbon protein | - |
| GC231_RS20515 (4185753) | 4185753..4186136 | - | 384 | WP_000271031.1 | putative zinc ribbon protein | - |
| GC231_RS20520 (4186397) | 4186397..4186966 | - | 570 | WP_000221484.1 | inovirus Gp2 family protein | - |
| GC231_RS20525 (4187170) | 4187170..4187367 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| GC231_RS20530 (4187713) | 4187713..4187862 | - | 150 | WP_052904223.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| GC231_RS20535 (4188614) | 4188614..4188820 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| GC231_RS20540 (4188907) | 4188907..4189509 | + | 603 | WP_228400274.1 | hypothetical protein | - |
| GC231_RS20545 (4189831) | 4189831..4191315 | - | 1485 | WP_001297234.1 | YfjI family protein | - |
| GC231_RS20550 (4192546) | 4192546..4193418 | + | 873 | WP_001069673.1 | GTPase family protein | - |
| GC231_RS20555 (4193746) | 4193746..4196865 | + | 3120 | WP_228400275.1 | autotransporter adhesin Ag43 | - |
| GC231_RS20560 (4196986) | 4196986..4199502 | + | 2517 | WP_025380686.1 | hypothetical protein | - |
| GC231_RS20565 (4199578) | 4199578..4200033 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| GC231_RS20570 (4200112) | 4200112..4200345 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| GC231_RS20575 (4200445) | 4200445..4201263 | + | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| GC231_RS20580 (4201318) | 4201318..4201803 | + | 486 | WP_000849580.1 | antirestriction protein | - |
| GC231_RS20585 (4201819) | 4201819..4202295 | + | 477 | WP_001186726.1 | RadC family protein | - |
| GC231_RS20590 (4202358) | 4202358..4202579 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| GC231_RS20595 (4202742) | 4202742..4203116 | + | 375 | WP_001280952.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GC231_RS20600 (4203163) | 4203163..4203540 | + | 378 | WP_000854904.1 | TA system toxin CbtA family protein | Toxin Detail |
| GC231_RS20605 (4203537) | 4203537..4204025 | + | 489 | WP_000779174.1 | DUF5983 family protein | - |
| GC231_RS20610 (4204037) | 4204037..4204234 | + | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| GC231_RS20615 (4204319) | 4204319..4205161 | + | 843 | WP_001562462.1 | DUF4942 domain-containing protein | - |
| GC231_RS20620 (4205504) | 4205504..4206040 | - | 537 | WP_000942795.1 | hypothetical protein | VF |
| GC231_RS20625 (4206042) | 4206042..4207220 | - | 1179 | WP_000094989.1 | hypothetical protein | VF |
| GC231_RS20630 (4207217) | 4207217..4208194 | - | 978 | WP_000633239.1 | hypothetical protein | VF |
| GC231_RS20635 (4208191) | 4208191..4208796 | - | 606 | WP_001255030.1 | hypothetical protein | VF |
| GC231_RS20640 (4208793) | 4208793..4209164 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| GC231_RS20645 (4209161) | 4209161..4209724 | - | 564 | WP_001115139.1 | hypothetical protein | VF |
| GC231_RS20650 (4209728) | 4209728..4210183 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| GC231_RS20655 (4210200) | 4210200..4211423 | - | 1224 | WP_001173448.1 | hypothetical protein | VF |
| GC231_RS20660 (4211423) | 4211423..4212916 | - | 1494 | WP_000249368.1 | hypothetical protein | VF |
| GC231_RS20665 (4212916) | 4212916..4214976 | - | 2061 | WP_000498824.1 | hypothetical protein | VF |
| GC231_RS20670 (4215006) | 4215006..4215965 | - | 960 | WP_001317325.1 | hypothetical protein | VF |
| GC231_RS20675 (4215983) | 4215983..4216393 | - | 411 | WP_001349452.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| GC231_RS20680 (4216459) | 4216459..4217268 | - | 810 | WP_001317326.1 | hypothetical protein | VF |
| GC231_RS20685 (4217408) | 4217408..4221976 | - | 4569 | WP_001034504.1 | hypothetical protein | VF |
| GC231_RS20690 (4222461) | 4222461..4224143 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| GC231_RS20695 (4224499) | 4224499..4226670 | - | 2172 | WP_000084053.1 | malate synthase G | - |
| GC231_RS20700 (4226692) | 4226692..4227096 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| GC231_RS20705 (4227101) | 4227101..4228324 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| GC231_RS20710 (4228335) | 4228335..4229387 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| GC231_RS20715 (4229387) | 4229387..4230886 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| GC231_RS20720 (4231137) | 4231137..4231901 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| GC231_RS20725 (4231908) | 4231908..4233050 | - | 1143 | WP_000388786.1 | protein YghO | - |
| GC231_RS20730 (4233421) | 4233421..4235142 | + | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| GC231_RS20735 (4235139) | 4235139..4236053 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GC231_RS20740 (4236085) | 4236085..4236333 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| GC231_RS20745 (4236333) | 4236333..4237505 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| GC231_RS20750 (4237540) | 4237540..4238619 | - | 1080 | WP_001298753.1 | LPS export ABC transporter permease LptG | - |
| GC231_RS20755 (4238616) | 4238616..4239686 | - | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| GC231_RS20760 (4239717) | 4239717..4240277 | - | 561 | WP_001315848.1 | YtfJ family protein | - |
| GC231_RS20765 (4240289) | 4240289..4241113 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| GC231_RS20770 (4241113) | 4241113..4242462 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| GC231_RS20775 (4242508) | 4242508..4243266 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| GC231_RS20780 (4243298) | 4243298..4244011 | - | 714 | WP_001076237.1 | dTMP kinase | - |
| GC231_RS20785 (4244185) | 4244185..4244877 | + | 693 | WP_001190773.1 | dTMP kinase | - |
| GC231_RS20790 (4244926) | 4244926..4246425 | - | 1500 | WP_220401205.1 | inorganic phosphate transporter PitA | - |
| GC231_RS20795 (4246717) | 4246717..4248576 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| GC231_RS20800 (4248781) | 4248781..4249647 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| GC231_RS20805 (4249947) | 4249947..4250927 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| GC231_RS20810 (4251049) | 4251049..4251297 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| GC231_RS20815 (4251310) | 4251310..4251651 | - | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| GC231_RS20820 (4251644) | 4251644..4252132 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| GC231_RS20825 (4252125) | 4252125..4252619 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| GC231_RS20830 (4252619) | 4252619..4254322 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| GC231_RS20835 (4254319) | 4254319..4255497 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| GC231_RS20840 (4255487) | 4255487..4256473 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| GC231_RS20845 (4256476) | 4256476..4257594 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| GC231_RS20850 (4257783) | 4257783..4258070 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| GC231_RS20855 (4258189) | 4258189..4259076 | - | 888 | WP_001297303.1 | YghX family hydrolase | - |
| GC231_RS20860 (4259233) | 4259233..4260273 | + | 1041 | WP_000262154.1 | L-glyceraldehyde 3-phosphate reductase | - |
| GC231_RS20865 (4260313) | 4260313..4260807 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| GC231_RS20870 (4260998) | 4260998..4261882 | + | 885 | WP_000018758.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| GC231_RS20875 (4262154) | 4262154..4262579 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| GC231_RS20880 (4262586) | 4262586..4263320 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| GC231_RS20885 (4263572) | 4263572..4264759 | + | 1188 | WP_001369830.1 | cystathionine beta-lyase | - |
| GC231_RS20890 (4264899) | 4264899..4265558 | + | 660 | WP_000268414.1 | DedA family general envelope maintenance protein YghB | - |
| GC231_RS20895 (4265598) | 4265598..4266497 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| GC231_RS20900 (4266691) | 4266691..4267854 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| GC231_RS20905 (4267959) | 4267959..4268786 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| GC231_RS20910 (4268986) | 4268986..4269912 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|