MGE detailed information
MGE type: Prophage MGE length: 49547 bp
Accession: NZ_CP045213 Location: 2566285..2615831 Organism: Escherichia coli strain EH41 Replicon: chromosome
Accession: NZ_CP045213 Location: 2566285..2615831 Organism: Escherichia coli strain EH41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GC231_RS12475 (2562798) | 2562798..2563544 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| GC231_RS12480 (2563633) | 2563633..2564319 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| GC231_RS12485 (2564497) | 2564497..2564700 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GC231_RS12490 (2564736) | 2564736..2566196 | - | 1461 | WP_000527759.1 | mannitol dehydrogenase family protein | - |
| GC231_RS12495 (2566285) | 2566285..2567568 | - | 1284 | Protein_2428 | MHS family MFS transporter YdfJ | - |
| GC231_RS12500 (2568173) | 2568173..2568286 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| GC231_RS12505 (2568355) | 2568355..2568588 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| GC231_RS12510 (2568905) | 2568905..2569495 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GC231_RS12515 (2569593) | 2569593..2570168 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| GC231_RS12520 (2570168) | 2570168..2573566 | - | 3399 | WP_220401880.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GC231_RS12525 (2573631) | 2573631..2574230 | - | 600 | WP_032292241.1 | hypothetical protein | VF |
| GC231_RS12530 (2574298) | 2574298..2577777 | - | 3480 | WP_000515751.1 | host specificity protein J | - |
| GC231_RS12535 (2577838) | 2577838..2578440 | - | 603 | WP_000090905.1 | tail assembly protein | - |
| GC231_RS12540 (2578377) | 2578377..2579120 | - | 744 | WP_000140764.1 | C40 family peptidase | - |
| GC231_RS12545 (2579126) | 2579126..2579824 | - | 699 | WP_001152580.1 | phage minor tail protein L | - |
| GC231_RS12550 (2579824) | 2579824..2580153 | - | 330 | WP_000847345.1 | phage tail protein | - |
| GC231_RS12555 (2580150) | 2580150..2582729 | - | 2580 | WP_000840345.1 | phage tail tape measure protein | - |
| GC231_RS12560 (2582722) | 2582722..2583156 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| GC231_RS12565 (2583138) | 2583138..2583560 | - | 423 | WP_001564532.1 | phage minor tail protein G | - |
| GC231_RS12570 (2583576) | 2583576..2584316 | - | 741 | WP_228400264.1 | phage tail protein | - |
| GC231_RS12575 (2584324) | 2584324..2584719 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| GC231_RS12580 (2584716) | 2584716..2585294 | - | 579 | WP_000985116.1 | phage tail protein | - |
| GC231_RS12585 (2585306) | 2585306..2585659 | - | 354 | WP_000752986.1 | head-tail joining protein | - |
| GC231_RS12590 (2585671) | 2585671..2586066 | - | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| GC231_RS12595 (2586108) | 2586108..2587133 | - | 1026 | WP_220401219.1 | major capsid protein | - |
| GC231_RS12600 (2587189) | 2587189..2587521 | - | 333 | WP_001299443.1 | head decoration protein | - |
| GC231_RS12605 (2587531) | 2587531..2588850 | - | 1320 | WP_220401827.1 | S49 family peptidase | - |
| GC231_RS12610 (2588831) | 2588831..2590432 | - | 1602 | WP_001316944.1 | phage portal protein | - |
| GC231_RS12615 (2590429) | 2590429..2590635 | - | 207 | WP_000198149.1 | gpW family protein | - |
| GC231_RS12620 (2590632) | 2590632..2592557 | - | 1926 | WP_032292250.1 | phage terminase large subunit family protein | - |
| GC231_RS12625 (2592532) | 2592532..2593077 | - | 546 | WP_000453603.1 | DNA-packaging protein | - |
| GC231_RS12630 (2593466) | 2593466..2593699 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| GC231_RS12635 (2593757) | 2593757..2594167 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| GC231_RS12640 (2594319) | 2594319..2594492 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| GC231_RS12645 (2594664) | 2594664..2594819 | - | 156 | WP_001309517.1 | protein YnfN | - |
| GC231_RS12650 (2594899) | 2594899..2594964 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| GC231_RS12655 (2594967) | 2594967..2595155 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| GC231_RS12660 (2595166) | 2595166..2595378 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GC231_RS12665 (2595741) | 2595741..2596238 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| GC231_RS12670 (2596235) | 2596235..2596768 | - | 534 | WP_001092971.1 | lysozyme | - |
| GC231_RS12675 (2596765) | 2596765..2597076 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| GC231_RS12680 (2597081) | 2597081..2597296 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| GC231_RS12685 (2597516) | 2597516..2597686 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| GC231_RS12690 (2598050) | 2598050..2598265 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| GC231_RS12695 (2598566) | 2598566..2598778 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| GC231_RS12700 (2598833) | 2598833..2598922 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| GC231_RS12705 (2599200) | 2599200..2599952 | - | 753 | WP_001047135.1 | antitermination protein | - |
| GC231_RS12710 (2599966) | 2599966..2601015 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| GC231_RS12715 (2601017) | 2601017..2601295 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| GC231_RS12720 (2601362) | 2601362..2601613 | - | 252 | WP_000980994.1 | protein Rem | - |
| GC231_RS12725 (2601830) | 2601830..2601985 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GC231_RS12730 (2602057) | 2602057..2602344 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GC231_RS12735 (2602344) | 2602344..2602583 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GC231_RS12740 (2602608) | 2602608..2602913 | + | 306 | WP_001326990.1 | protein YdfV | - |
| GC231_RS12745 (2603116) | 2603116..2603448 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| GC231_RS12750 (2603885) | 2603885..2604034 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| GC231_RS12755 (2604107) | 2604107..2605177 | - | 1071 | Protein_2480 | ISNCY family transposase ISCARN112 | Transposase |
| GC231_RS12760 (2605968) | 2605968..2606255 | - | 288 | Protein_2481 | hypothetical protein | - |
| GC231_RS12765 (2606733) | 2606733..2607222 | - | 490 | Protein_2482 | class I SAM-dependent methyltransferase | - |
| GC231_RS12770 (2607219) | 2607219..2607641 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| GC231_RS12775 (2607682) | 2607682..2608647 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| GC231_RS12780 (2608628) | 2608628..2609149 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| GC231_RS12785 (2609133) | 2609133..2609363 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| GC231_RS12790 (2609447) | 2609447..2609854 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| GC231_RS12795 (2610021) | 2610021..2610176 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| GC231_RS25610 (2610178) | 2610178..2610306 | + | 129 | WP_000344964.1 | protein YdfB | - |
| GC231_RS12800 (2610336) | 2610336..2610554 | + | 219 | WP_001171942.1 | protein YdfC | - |
| GC231_RS12805 (2611122) | 2611122..2611310 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| GC231_RS12810 (2611307) | 2611307..2611498 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| GC231_RS12815 (2611591) | 2611591..2614062 | + | 2472 | WP_040089035.1 | exonuclease | - |
| GC231_RS12820 (2614135) | 2614135..2614386 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| GC231_RS12825 (2614421) | 2614421..2615701 | + | 1281 | WP_000877001.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GC231_RS12830 (2615889) | 2615889..2616908 | - | 1020 | WP_000836072.1 | Zn-dependent oxidoreductase | - |
| GC231_RS12835 (2616920) | 2616920..2618134 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| GC231_RS12840 (2618340) | 2618340..2618666 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| GC231_RS12845 (2618801) | 2618801..2619142 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| GC231_RS12850 (2619177) | 2619177..2619737 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| GC231_RS12855 (2619740) | 2619740..2620450 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|