MGE detailed information
MGE type: Prophage MGE length: 45380 bp
Accession: NZ_CP045213 Location: 2055214..2100593 Organism: Escherichia coli strain EH41 Replicon: chromosome
Accession: NZ_CP045213 Location: 2055214..2100593 Organism: Escherichia coli strain EH41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GC231_RS09855 (2050946) | 2050946..2051767 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| GC231_RS09860 (2051906) | 2051906..2052694 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| GC231_RS09865 (2052691) | 2052691..2053152 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| GC231_RS09870 (2053210) | 2053210..2054256 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| GC231_RS09875 (2054253) | 2054253..2055047 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| GC231_RS09880 (2055214) | 2055214..2056332 | - | 1119 | WP_000074988.1 | hypothetical protein ; Integrase | Integrase |
| GC231_RS09885 (2056301) | 2056301..2056570 | - | 270 | WP_000003742.1 | excisionase | - |
| GC231_RS09890 (2056632) | 2056632..2059103 | - | 2472 | WP_220401873.1 | exonuclease | - |
| GC231_RS09895 (2059199) | 2059199..2059387 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| GC231_RS09900 (2059384) | 2059384..2059572 | - | 189 | WP_000450222.1 | cell division inhibition protein DicB | - |
| GC231_RS09905 (2060131) | 2060131..2060304 | + | 174 | WP_001376375.1 | hypothetical protein | - |
| GC231_RS09910 (2060463) | 2060463..2060642 | - | 180 | Protein_1916 | hypothetical protein | - |
| GC231_RS09915 (2060798) | 2060798..2060950 | - | 153 | WP_000380319.1 | DUF1391 family protein | - |
| GC231_RS09920 (2061219) | 2061219..2061509 | - | 291 | WP_033812095.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GC231_RS09925 (2061509) | 2061509..2061700 | - | 192 | WP_033812094.1 | hypothetical protein | Antitoxin Detail |
| GC231_RS09930 (2061718) | 2061718..2062218 | - | 501 | WP_033812093.1 | helix-turn-helix transcriptional regulator | - |
| GC231_RS09935 (2062326) | 2062326..2062601 | + | 276 | WP_047083516.1 | helix-turn-helix transcriptional regulator | - |
| GC231_RS09940 (2062585) | 2062585..2063010 | + | 426 | WP_000693925.1 | toxin YdaT family protein | - |
| GC231_RS09945 (2063079) | 2063079..2064110 | + | 1032 | WP_228400300.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| GC231_RS09950 (2064103) | 2064103..2064564 | + | 462 | WP_000139447.1 | replication protein P | - |
| GC231_RS09955 (2064598) | 2064598..2065314 | + | 717 | WP_228400301.1 | DUF1627 domain-containing protein | - |
| GC231_RS09960 (2065347) | 2065347..2065628 | + | 282 | WP_220401892.1 | DNA-binding protein | - |
| GC231_RS09965 (2065625) | 2065625..2065930 | + | 306 | WP_072095369.1 | DUF4406 domain-containing protein | - |
| GC231_RS09970 (2066078) | 2066078..2066260 | + | 183 | WP_001224668.1 | hypothetical protein | - |
| GC231_RS09975 (2066253) | 2066253..2066429 | + | 177 | WP_000753060.1 | hypothetical protein | - |
| GC231_RS09980 (2066861) | 2066861..2067016 | + | 156 | WP_198406609.1 | Hok/Gef family protein | - |
| GC231_RS09985 (2067183) | 2067183..2067455 | + | 273 | WP_135301015.1 | hypothetical protein | - |
| GC231_RS09990 (2067457) | 2067457..2068506 | + | 1050 | Protein_1932 | DUF968 domain-containing protein | - |
| GC231_RS09995 (2068519) | 2068519..2068878 | + | 360 | WP_000904152.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GC231_RS10000 (2068887) | 2068887..2069417 | + | 531 | WP_001367730.1 | DUF1133 family protein | - |
| GC231_RS10005 (2069659) | 2069659..2069856 | + | 198 | WP_000917768.1 | hypothetical protein | - |
| GC231_RS10010 (2070043) | 2070043..2071065 | + | 1023 | WP_077878744.1 | site-specific DNA-methyltransferase | - |
| GC231_RS10030 (2071448) | 2071448..2072407 | + | 960 | WP_228400302.1 | Shiga toxin subunit A | VF |
| GC231_RS10035 (2072419) | 2072419..2072688 | + | 270 | WP_228400303.1 | Shiga toxin subunit B | VF |
| GC231_RS10040 (2073201) | 2073201..2075147 | + | 1947 | WP_220401894.1 | DUF1737 domain-containing protein | - |
| GC231_RS10045 (2075285) | 2075285..2075464 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| GC231_RS10050 (2075505) | 2075505..2075750 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| GC231_RS10055 (2075828) | 2075828..2076043 | + | 216 | WP_000284491.1 | class II holin family protein | - |
| GC231_RS10060 (2076047) | 2076047..2076532 | + | 486 | WP_001457151.1 | hypothetical protein | - |
| GC231_RS10065 (2077044) | 2077044..2077577 | + | 534 | WP_001092875.1 | lysozyme | - |
| GC231_RS10070 (2077734) | 2077734..2077916 | + | 183 | WP_062896309.1 | hypothetical protein | - |
| GC231_RS25590 (2077931) | 2077931..2078062 | + | 132 | WP_001280927.1 | hypothetical protein | - |
| GC231_RS10075 (2078285) | 2078285..2078470 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| GC231_RS10080 (2078944) | 2078944..2079420 | + | 477 | WP_000373398.1 | DUF1441 family protein | - |
| GC231_RS10085 (2079417) | 2079417..2081540 | + | 2124 | WP_001077608.1 | phage terminase large subunit family protein | - |
| GC231_RS10090 (2081537) | 2081537..2081749 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| GC231_RS10095 (2081749) | 2081749..2083251 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| GC231_RS10100 (2083196) | 2083196..2085220 | + | 2025 | WP_123002952.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GC231_RS10105 (2085308) | 2085308..2085634 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| GC231_RS10110 (2085627) | 2085627..2085908 | + | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| GC231_RS10115 (2085911) | 2085911..2086534 | + | 624 | WP_000974963.1 | phage tail protein | - |
| GC231_RS10120 (2086547) | 2086547..2086945 | + | 399 | WP_000682716.1 | phage tail terminator protein | - |
| GC231_RS10125 (2086953) | 2086953..2087705 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| GC231_RS10130 (2087719) | 2087719..2088141 | + | 423 | WP_000479042.1 | phage minor tail protein G | - |
| GC231_RS10135 (2088168) | 2088168..2088470 | + | 303 | Protein_1959 | phage tail assembly protein T | - |
| GC231_RS10140 (2088520) | 2088520..2091129 | + | 2610 | WP_228400304.1 | phage tail tape measure protein | - |
| GC231_RS10145 (2091126) | 2091126..2091455 | + | 330 | WP_000847279.1 | phage tail protein | - |
| GC231_RS10150 (2091455) | 2091455..2092153 | + | 699 | WP_001499019.1 | phage minor tail protein L | - |
| GC231_RS10155 (2092164) | 2092164..2092907 | + | 744 | WP_044808579.1 | C40 family peptidase | - |
| GC231_RS10160 (2092904) | 2092904..2093485 | + | 582 | WP_137462987.1 | tail assembly protein | - |
| GC231_RS10165 (2094415) | 2094415..2098101 | + | 3687 | WP_228400306.1 | phage tail protein | - |
| GC231_RS10170 (2098300) | 2098300..2098440 | + | 141 | WP_000078853.1 | Hok/Gef family protein | - |
| GC231_RS10175 (2098585) | 2098585..2099853 | + | 1269 | WP_228400307.1 | ISNCY family transposase KIS | Transposase |
| GC231_RS10180 (2099922) | 2099922..2100593 | + | 672 | WP_060612361.1 | DUF4376 domain-containing protein | - |
| GC231_RS10185 (2100758) | 2100758..2101087 | - | 330 | WP_022581964.1 | YkgJ family cysteine cluster protein | - |
| GC231_RS10190 (2101253) | 2101253..2102116 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| GC231_RS10195 (2102100) | 2102100..2103236 | - | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| GC231_RS10200 (2103486) | 2103486..2104715 | + | 1230 | WP_220401145.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|