MGE detailed information

MGE type: Prophage        MGE length: 127240 bp
Accession: NZ_CP045209        Location: 1966635..2093874         Organism: Escherichia coli strain 4       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GC226_RS09280 (1964108) 1964108..1965181 - 1074 WP_000810275.1 acyltransferase family protein -
GC226_RS09285 (1965443) 1965443..1966642 + 1200 WP_000284714.1 lipoprotein-releasing ABC transporter permease subunit LolC -
GC226_RS09290 (1966635) 1966635..1967336 + 702 WP_001033695.1 Lipoprotein-releasing system ATP-binding protein LolD VF
GC226_RS09295 (1967336) 1967336..1968580 + 1245 WP_001251389.1 lipoprotein-releasing ABC transporter permease subunit LolE -
GC226_RS09300 (1968609) 1968609..1969520 + 912 WP_000291270.1 N-acetylglucosamine kinase -
GC226_RS09305 (1969536) 1969536..1970357 + 822 WP_000952736.1 NAD-dependent protein deacylase -
GC226_RS09310 (1970496) 1970496..1971284 - 789 WP_000713472.1 TPM domain-containing protein -
GC226_RS09315 (1971281) 1971281..1971742 - 462 WP_001341497.1 DUF3592 domain-containing protein -
GC226_RS09320 (1971800) 1971800..1972846 - 1047 WP_000759317.1 spermidine/putrescine ABC transporter substrate-binding protein PotD -
GC226_RS09325 (1972843) 1972843..1973637 - 795 WP_000580316.1 spermidine/putrescine ABC transporter permease PotC -
GC226_RS09330 (1973804) 1973804..1974922 - 1119 WP_000074972.1 hypothetical protein ; Integrase Integrase
GC226_RS09335 (1974891) 1974891..1975160 - 270 WP_000003742.1 excisionase -
GC226_RS09340 (1975222) 1975222..1977624 - 2403 WP_095585566.1 exonuclease -
GC226_RS09345 (1977717) 1977717..1977905 - 189 WP_000092782.1 DUF1482 family protein -
GC226_RS09350 (1977902) 1977902..1978090 - 189 WP_000450222.1 cell division inhibition protein DicB -
GC226_RS09355 (1978649) 1978649..1978822 + 174 WP_001376375.1 hypothetical protein -
GC226_RS09360 (1978981) 1978981..1979160 - 180 Protein_1807 hypothetical protein -
GC226_RS09365 (1979316) 1979316..1979468 - 153 WP_000380319.1 DUF1391 family protein -
GC226_RS09370 (1979737) 1979737..1980027 - 291 WP_033812095.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
GC226_RS09375 (1980027) 1980027..1980218 - 192 WP_033812094.1 hypothetical protein Antitoxin Detail
GC226_RS09380 (1980236) 1980236..1980736 - 501 WP_033812093.1 helix-turn-helix transcriptional regulator -
GC226_RS09385 (1980844) 1980844..1981119 + 276 WP_135258987.1 helix-turn-helix transcriptional regulator -
GC226_RS09390 (1981103) 1981103..1981528 + 426 WP_000693925.1 toxin YdaT family protein -
GC226_RS09395 (1981597) 1981597..1982634 + 1038 WP_001373300.1 DnaT-like ssDNA-binding domain-containing protein -
GC226_RS09400 (1982627) 1982627..1983088 + 462 WP_000139447.1 replication protein P -
GC226_RS09405 (1983122) 1983122..1983838 + 717 WP_028985606.1 DUF1627 domain-containing protein -
GC226_RS09410 (1983871) 1983871..1984152 + 282 WP_072094476.1 DNA-binding protein -
GC226_RS09415 (1984149) 1984149..1984454 + 306 WP_072095369.1 DUF4406 domain-containing protein -
GC226_RS09420 (1984602) 1984602..1984784 + 183 WP_001224672.1 hypothetical protein -
GC226_RS09425 (1984777) 1984777..1984953 + 177 WP_000753060.1 hypothetical protein -
GC226_RS09430 (1984950) 1984950..1985465 + 516 WP_001289995.1 hypothetical protein -
GC226_RS09435 (1985756) 1985756..1985911 + 156 WP_000813246.1 Hok/Gef family protein -
GC226_RS09440 (1986078) 1986078..1986350 + 273 WP_001341173.1 hypothetical protein -
GC226_RS09445 (1986352) 1986352..1987401 + 1050 WP_032284906.1 DUF968 domain-containing protein -
GC226_RS09450 (1987414) 1987414..1987788 + 375 WP_000904388.1 RusA family crossover junction endodeoxyribonuclease -
GC226_RS09455 (1987785) 1987785..1988606 + 822 WP_000762903.1 antitermination protein -
GC226_RS09460 (1988832) 1988832..1989029 + 198 WP_000917750.1 hypothetical protein -
GC226_RS09465 (1989180) 1989180..1990238 + 1059 WP_135259017.1 site-specific DNA-methyltransferase -
GC226_RS09485 (1990622) 1990622..1991581 + 960 WP_000649753.1 Shiga toxin subunit A VF
GC226_RS09490 (1991593) 1991593..1991862 + 270 WP_000738072.1 Shiga toxin subunit B VF
GC226_RS09495 (1992160) 1992160..1992483 - 324 Protein_1831 anti-adapter protein IraM -
GC226_RS09500 (1992727) 1992727..1994664 + 1938 WP_228400196.1 SASA family carbohydrate esterase -
GC226_RS09505 (1994802) 1994802..1994981 + 180 WP_000143458.1 DUF1378 family protein -
GC226_RS09510 (1995022) 1995022..1995267 + 246 WP_001290230.1 DUF826 domain-containing protein -
GC226_RS09515 (1995345) 1995345..1995560 + 216 WP_000284506.1 class II holin family protein -
GC226_RS09520 (1995564) 1995564..1995812 + 249 Protein_1836 DUF1327 domain-containing protein -
GC226_RS09525 (1996444) 1996444..1996731 + 288 WP_024199769.1 hypothetical protein -
GC226_RS09530 (1996866) 1996866..1997399 + 534 WP_001092874.1 lysozyme -
GC226_RS09535 (1997674) 1997674..1998246 + 573 WP_001056888.1 phage antirepressor N-terminal domain-containing protein -
GC226_RS09540 (1998246) 1998246..1998395 + 150 WP_000443009.1 hypothetical protein -
GC226_RS09545 (1998398) 1998398..1998835 + 438 WP_032209690.1 lysis protein -
GC226_RS09550 (1999038) 1999038..1999580 + 543 WP_001109017.1 Rha family transcriptional regulator -
GC226_RS09555 (2000257) 2000257..2000766 + 510 WP_000235436.1 terminase small subunit -
GC226_RS09560 (2000738) 2000738..2002666 + 1929 WP_228400197.1 phage terminase large subunit family protein -
GC226_RS09565 (2002650) 2002650..2002856 + 207 WP_000259002.1 gpW family head-tail joining protein -
GC226_RS09570 (2002853) 2002853..2004445 + 1593 WP_024174188.1 phage portal protein -
GC226_RS09575 (2004435) 2004435..2005940 + 1506 WP_096097124.1 S49 family peptidase -
GC226_RS09580 (2005977) 2005977..2006324 + 348 WP_024213760.1 head decoration protein -
GC226_RS09585 (2006382) 2006382..2007410 + 1029 WP_021543836.1 major capsid protein -
GC226_RS09590 (2007462) 2007462..2007845 + 384 WP_062867414.1 DNA-packaging protein FI -
GC226_RS09595 (2007838) 2007838..2008191 + 354 WP_001204554.1 head-tail joining protein -
GC226_RS09600 (2008207) 2008207..2008782 + 576 WP_024213759.1 phage tail protein -
GC226_RS09605 (2008779) 2008779..2009174 + 396 WP_000683079.1 phage minor tail U family protein -
GC226_RS09610 (2009182) 2009182..2009928 + 747 WP_050867563.1 phage tail protein -
GC226_RS09615 (2009947) 2009947..2010378 + 432 WP_000479116.1 phage minor tail protein G -
GC226_RS09620 (2010405) 2010405..2010818 + 414 WP_000533402.1 phage tail assembly protein T -
GC226_RS09625 (2010799) 2010799..2013372 + 2574 WP_228400198.1 phage tail tape measure protein -
GC226_RS09630 (2013369) 2013369..2013698 + 330 WP_000847279.1 phage tail protein -
GC226_RS09635 (2013698) 2013698..2014421 + 724 Protein_1859 phage minor tail protein L -
GC226_RS09640 (2014408) 2014408..2015151 + 744 WP_228400199.1 C40 family peptidase -
GC226_RS09645 (2015148) 2015148..2015729 + 582 WP_001089953.1 tail assembly protein -
GC226_RS09650 (2015969) 2015969..2019655 + 3687 WP_228400200.1 phage tail protein -
GC226_RS09655 (2019854) 2019854..2019994 + 141 WP_000078853.1 Hok/Gef family protein -
GC226_RS09660 (2020139) 2020139..2021797 + 1659 WP_228400201.1 ISNCY family transposase KIS Transposase
GC226_RS09665 (2021807) 2021807..2022019 + 213 WP_000438830.1 hypothetical protein -
GC226_RS09670 (2022031) 2022031..2022705 + 675 WP_001373129.1 DUF4376 domain-containing protein -
GC226_RS09675 (2022869) 2022869..2023198 - 330 WP_022581964.1 YkgJ family cysteine cluster protein -
GC226_RS09680 (2023364) 2023364..2024227 - 864 WP_000799399.1 spermidine/putrescine ABC transporter permease PotB -
GC226_RS09685 (2024211) 2024211..2025347 - 1137 WP_000531601.1 Spermidine/putrescine import ATP-binding protein PotA VF
GC226_RS09690 (2025597) 2025597..2026826 + 1230 WP_000359432.1 peptidase T -
GC226_RS09695 (2026972) 2026972..2028093 - 1122 WP_000456506.1 [50S ribosomal protein L16]-arginine 3-hydroxylase -
GC226_RS09700 (2028342) 2028342..2029571 + 1230 WP_032317082.1 Prophage integrase IntS ; Integrase Integrase
GC226_RS09705 (2029946) 2029946..2030134 + 189 WP_000953271.1 AlpA family transcriptional regulator -
GC226_RS09710 (2030378) 2030378..2030581 - 204 WP_000182306.1 hypothetical protein -
GC226_RS09715 (2030639) 2030639..2030818 - 180 WP_000103621.1 hypothetical protein -
GC226_RS09720 (2031324) 2031324..2031503 - 180 WP_000201463.1 YlcI/YnfO family protein -
GC226_RS25100 (2031696) 2031696..2032034 + 339 Protein_1877 ash family protein -
GC226_RS25105 (2032065) 2032065..2032259 + 195 WP_028985255.1 host cell division inhibitor Icd-like protein -
GC226_RS09730 (2032246) 2032246..2032446 + 201 WP_032279725.1 hypothetical protein -
GC226_RS09735 (2032452) 2032452..2032751 + 300 WP_000728896.1 DUF4222 domain-containing protein -
GC226_RS09740 (2032748) 2032748..2034145 + 1398 WP_228400202.1 helicase RepA family protein -
GC226_RS09745 (2034348) 2034348..2034599 + 252 WP_024200918.1 hypothetical protein -
GC226_RS09750 (2034596) 2034596..2034910 + 315 WP_001294163.1 hypothetical protein -
GC226_RS09755 (2034920) 2034920..2035330 + 411 WP_000126663.1 single-stranded DNA-binding protein -
GC226_RS09760 (2035341) 2035341..2035589 + 249 WP_000233314.1 PerC family transcriptional regulator -
GC226_RS09765 (2035730) 2035730..2035954 + 225 WP_001142405.1 hypothetical protein -
GC226_RS09770 (2036246) 2036246..2037403 + 1158 WP_228400203.1 phage major capsid protein -
GC226_RS09775 (2037443) 2037443..2038015 + 573 WP_000504056.1 HK97 family phage prohead protease -
GC226_RS09780 (2038017) 2038017..2039228 + 1212 WP_000267605.1 phage portal protein -
GC226_RS09785 (2039225) 2039225..2039563 + 339 WP_001020659.1 phage head closure protein -
GC226_RS09790 (2039560) 2039560..2039856 + 297 WP_000134109.1 head-tail connector protein -
GC226_RS09795 (2039856) 2039856..2040296 + 441 WP_001145905.1 HNH endonuclease -
GC226_RS09800 (2040280) 2040280..2040462 + 183 WP_000174068.1 hypothetical protein -
GC226_RS09805 (2040586) 2040586..2040942 + 357 WP_000113645.1 phage terminase small subunit P27 family -
GC226_RS09810 (2040926) 2040926..2042587 + 1662 WP_000127881.1 terminase large subunit -
GC226_RS09815 (2042601) 2042601..2042882 + 282 WP_000133415.1 hypothetical protein -
GC226_RS09820 (2043732) 2043732..2045192 - 1461 WP_000735412.1 two-component system sensor histidine kinase PhoQ -
GC226_RS09825 (2045192) 2045192..2045863 - 672 WP_001265481.1 Transcriptional regulatory protein PhoP VF
GC226_RS09830 (2046031) 2046031..2047401 - 1371 WP_000423729.1 adenylosuccinate lyase -
GC226_RS09835 (2047405) 2047405..2048046 - 642 WP_001297479.1 high frequency lysogenization protein HflD -
GC226_RS09840 (2048082) 2048082..2049188 - 1107 WP_001297484.1 tRNA 2-thiouridine(34) synthase MnmA -
GC226_RS09845 (2049242) 2049242..2049703 - 462 WP_000476089.1 phosphatase NudJ -
GC226_RS09850 (2049713) 2049713..2050366 - 654 WP_001248691.1 23S rRNA pseudouridine(2457) synthase RluE -
GC226_RS09855 (2050538) 2050538..2051788 + 1251 WP_000444487.1 NADP-dependent isocitrate dehydrogenase -
GC226_RS09860 (2052195) 2052195..2054522 - 2328 WP_000885267.1 NB-ARC domain-containing protein -
GC226_RS09865 (2054841) 2054841..2055968 - 1128 WP_000741318.1 hypothetical protein ; Integrase Integrase
GC226_RS09870 (2055949) 2055949..2056194 - 246 WP_001527050.1 excisionase -
GC226_RS09875 (2056249) 2056249..2056785 - 537 WP_000008212.1 HD family hydrolase -
GC226_RS09880 (2056914) 2056914..2057738 - 825 WP_000081287.1 DUF2303 family protein -
GC226_RS09885 (2057804) 2057804..2058166 - 363 WP_000135682.1 protein YfdP -
GC226_RS09890 (2058181) 2058181..2058491 - 311 Protein_1911 hypothetical protein -
GC226_RS09895 (2058767) 2058767..2059042 - 276 WP_071532095.1 hypothetical protein -
GC226_RS09900 (2059051) 2059051..2059254 - 204 WP_001369946.1 ClpX C4-type zinc finger protein -
GC226_RS09905 (2059531) 2059531..2060223 - 693 WP_001369890.1 S24 family peptidase -
GC226_RS09910 (2060321) 2060321..2060581 + 261 WP_001191674.1 helix-turn-helix transcriptional regulator -
GC226_RS09915 (2060574) 2060574..2061125 + 552 WP_000515847.1 protein YmfL -
GC226_RS09920 (2061301) 2061301..2061480 + 180 WP_001250269.1 DUF4222 domain-containing protein -
GC226_RS09925 (2061470) 2061470..2062411 + 942 WP_000104988.1 helix-turn-helix domain-containing protein -
GC226_RS09930 (2062408) 2062408..2062902 + 495 WP_074400771.1 PerC family transcriptional regulator -
GC226_RS09935 (2062902) 2062902..2063555 + 654 WP_001369966.1 phage N-6-adenine-methyltransferase -
GC226_RS09940 (2063552) 2063552..2063878 + 327 WP_000210130.1 LexA family transcriptional regulator -
GC226_RS09945 (2063875) 2063875..2064264 + 390 WP_000767113.1 RusA family crossover junction endodeoxyribonuclease -
GC226_RS09950 (2064284) 2064284..2065126 + 843 WP_001061425.1 KilA-N domain-containing protein -
GC226_RS09955 (2065134) 2065134..2066123 + 990 WP_033812102.1 DUF968 domain-containing protein -
GC226_RS09960 (2066141) 2066141..2066488 + 348 WP_001205449.1 antiterminator Q family protein -
GC226_RS09965 (2066502) 2066502..2067593 - 1092 WP_001198055.1 MBL fold metallo-hydrolase -
GC226_RS09970 (2067617) 2067617..2068189 - 573 WP_001024069.1 hypothetical protein -
GC226_RS09975 (2068186) 2068186..2068902 - 717 WP_000143147.1 hypothetical protein -
GC226_RS09980 (2069278) 2069278..2069604 + 327 WP_001120498.1 phage holin, lambda family -
GC226_RS09985 (2069608) 2069608..2070084 + 477 WP_001148537.1 glycoside hydrolase family protein -
GC226_RS09990 (2070068) 2070068..2070460 + 393 WP_001369893.1 DUF2570 domain-containing protein -
GC226_RS09995 (2070345) 2070345..2070620 + 276 WP_122985440.1 peptidase -
GC226_RS10000 (2070913) 2070913..2071263 + 351 WP_001140095.1 HNH endonuclease signature motif containing protein -
GC226_RS10005 (2071390) 2071390..2071884 + 495 WP_000929173.1 phage terminase small subunit P27 family -
GC226_RS10010 (2071881) 2071881..2073614 + 1734 WP_000088150.1 terminase large subunit -
GC226_RS10015 (2073626) 2073626..2073808 + 183 WP_000605606.1 protein YmfR -
GC226_RS10020 (2073808) 2073808..2075049 + 1242 WP_000466253.1 phage portal protein -
GC226_RS10025 (2075027) 2075027..2075677 + 651 WP_001398562.1 HK97 family phage prohead protease -
GC226_RS10030 (2075692) 2075692..2076897 + 1206 WP_000257511.1 phage major capsid protein -
GC226_RS10035 (2076947) 2076947..2077147 + 201 WP_000601360.1 hypothetical protein -
GC226_RS10040 (2077150) 2077150..2077473 + 324 WP_000927719.1 head-tail connector protein -
GC226_RS10045 (2077470) 2077470..2077880 + 411 WP_000702388.1 phage head closure protein -
GC226_RS10050 (2077855) 2077855..2078361 + 507 WP_000213502.1 hypothetical protein -
GC226_RS10055 (2078358) 2078358..2078918 + 561 WP_000779292.1 hypothetical protein -
GC226_RS10060 (2078927) 2078927..2079097 + 171 WP_000497751.1 DUF2635 domain-containing protein -
GC226_RS10065 (2079081) 2079081..2080577 + 1497 WP_000155716.1 phage tail sheath subtilisin-like domain-containing protein -
GC226_RS10070 (2080577) 2080577..2080933 + 357 WP_000090998.1 phage tail tube protein -
GC226_RS10075 (2080933) 2080933..2081202 + 270 WP_000661054.1 phage tail assembly protein -
GC226_RS10080 (2081344) 2081344..2083179 + 1836 WP_000807196.1 phage tail tape measure protein -
GC226_RS10085 (2083240) 2083240..2084568 + 1329 WP_000219910.1 DNA circularization N-terminal domain-containing protein -
GC226_RS10090 (2084565) 2084565..2085644 + 1080 WP_000999507.1 hypothetical protein -
GC226_RS10095 (2085644) 2085644..2086192 + 549 WP_001259081.1 phage baseplate assembly protein V -
GC226_RS10100 (2086192) 2086192..2086617 + 426 WP_000424732.1 phage GP46 family protein -
GC226_RS10105 (2086604) 2086604..2087662 + 1059 WP_000785311.1 baseplate J/gp47 family protein -
GC226_RS10110 (2087653) 2087653..2088237 + 585 WP_000383545.1 YmfQ family protein -
GC226_RS10115 (2088241) 2088241..2089023 + 783 WP_000554690.1 tail fiber protein -
GC226_RS10120 (2089023) 2089023..2089625 + 603 WP_001057699.1 tail fiber assembly protein -
GC226_RS10125 (2089597) 2089597..2090028 - 432 WP_000416463.1 tail fiber assembly protein -
GC226_RS10130 (2090031) 2090031..2090426 - 396 WP_032193144.1 hypothetical protein -
GC226_RS10135 (2090456) 2090456..2091010 + 555 WP_228400204.1 Tn3 family transposase TnpR_ISPa38 Transposase
GC226_RS10140 (2091117) 2091117..2091950 + 834 WP_000557907.1 5-methylcytosine-specific endonuclease McrA -
GC226_RS10145 (2092181) 2092181..2092348 + 168 Protein_1962 isocitrate/isopropylmalate family dehydrogenase -
GC226_RS10150 (2092451) 2092451..2092774 - 324 WP_001307134.1 anti-adapter protein IraM -
GC226_RS10155 (2093027) 2093027..2093071 - 45 WP_120795380.1 protein YmgK -
GC226_RS10160 (2093307) 2093307..2093417 - 111 WP_032141808.1 hypothetical protein -
GC226_RS10165 (2093470) 2093470..2093874 - 405 WP_000373101.1 DUF1398 domain-containing protein -
GC226_RS10170 (2094095) 2094095..2094826 - 732 WP_000332302.1 DNA-binding transcriptional repressor BluR -
GC226_RS10175 (2095031) 2095031..2096242 - 1212 WP_001297681.1 blue light-responsive regulator BluF -
GC226_RS10180 (2096556) 2096556..2096792 + 237 WP_000554153.1 regulatory protein YcgZ -
GC226_RS10185 (2096835) 2096835..2097107 + 273 WP_000858002.1 two-component-system connector protein YmgA -
GC226_RS10190 (2097136) 2097136..2097402 + 267 WP_000888772.1 biofilm/acid-resistance regulator AriR -
GC226_RS10195 (2097515) 2097515..2097763 + 249 WP_001065752.1 protein YmgC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance