MGE detailed information
MGE type: Genomic_island MGE length: 54598 bp
Accession: NZ_CP045206 Location: 4368413..4423010 Organism: Escherichia coli strain DE17 Replicon: chromosome
Accession: NZ_CP045206 Location: 4368413..4423010 Organism: Escherichia coli strain DE17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBG22_RS21325 () | 4364656..4365447 | - | 792 | WP_000977396.1 | DUF4198 domain-containing protein | - |
| GBG22_RS21330 () | 4365466..4367436 | - | 1971 | WP_001313270.1 | TonB-dependent receptor | - |
| GBG22_RS21335 () | 4367603..4368646 | - | 1044 | Protein_4175 | DDE-type integrase/transposase/recombinase | - |
| GBG22_RS21340 () | 4369308..4369415 | - | 108 | WP_001313273.1 | hypothetical protein | - |
| GBG22_RS21345 () | 4369424..4369609 | - | 186 | WP_089581225.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GBG22_RS21350 () | 4369780..4371096 | + | 1317 | WP_000803221.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| GBG22_RS21355 () | 4371235..4372232 | + | 998 | Protein_4179 | IS110 family transposase | - |
| GBG22_RS21360 () | 4372591..4373934 | + | 1344 | WP_000551919.1 | esterase-like activity of phytase family protein | - |
| GBG22_RS21365 () | 4374091..4374915 | - | 825 | WP_001293447.1 | MurR/RpiR family transcriptional regulator | - |
| GBG22_RS21370 () | 4375081..4376637 | + | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| GBG22_RS21375 () | 4376637..4377326 | + | 690 | WP_000859647.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| GBG22_RS21380 () | 4377741..4378389 | + | 649 | Protein_4184 | IS3 family transposase IS1203 | Transposase |
| GBG22_RS21385 () | 4378579..4378917 | + | 339 | WP_000760916.1 | c-type lysozyme inhibitor | - |
| GBG22_RS21390 () | 4379302..4379757 | - | 456 | WP_000884152.1 | sigma-70 family RNA polymerase sigma factor | - |
| GBG22_RS21395 () | 4379819..4381177 | - | 1359 | WP_000919997.1 | Adhesin YadA | VF |
| GBG22_RS21400 () | 4382028..4382141 | - | 114 | WP_131501864.1 | transposase | - |
| GBG22_RS21405 () | 4382404..4383357 | - | 954 | WP_000609007.1 | transketolase family protein | - |
| GBG22_RS21410 () | 4383350..4384180 | - | 831 | WP_001101067.1 | transketolase | - |
| GBG22_RS21415 () | 4384177..4385565 | - | 1389 | WP_000470229.1 | PTS ascorbate transporter subunit IIC | - |
| GBG22_RS21420 () | 4385588..4385860 | - | 273 | WP_000699820.1 | PTS sugar transporter subunit IIB | - |
| GBG22_RS21425 () | 4385939..4386382 | - | 444 | WP_001317566.1 | PTS sugar transporter subunit IIA | - |
| GBG22_RS21430 () | 4386640..4387659 | + | 1020 | WP_001018808.1 | LacI family DNA-binding transcriptional regulator | - |
| GBG22_RS21435 () | 4388255..4388446 | + | 192 | WP_001366542.1 | hypothetical protein | - |
| GBG22_RS21440 () | 4388515..4388763 | + | 249 | WP_023147588.1 | hypothetical protein | - |
| GBG22_RS21445 () | 4388781..4389329 | - | 549 | WP_001167444.1 | hypothetical protein | - |
| GBG22_RS21450 () | 4389607..4389840 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| GBG22_RS21455 () | 4389864..4390481 | - | 618 | WP_001593693.1 | hypothetical protein | - |
| GBG22_RS21460 () | 4390728..4391294 | - | 567 | WP_039267755.1 | inovirus-type Gp2 protein | - |
| GBG22_RS21465 () | 4392430..4393643 | - | 1214 | Protein_4201 | IS3 family transposase | - |
| GBG22_RS21470 () | 4393681..4394845 | + | 1165 | Protein_4202 | IS256 family transposase ISSod4 | Transposase |
| GBG22_RS21475 () | 4395025..4397073 | - | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| GBG22_RS21480 () | 4397266..4398494 | + | 1229 | WP_153275894.1 | IS3 family transposase IS2 | Transposase |
| GBG22_RS21485 () | 4398605..4399336 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| GBG22_RS21490 () | 4400006..4400536 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| GBG22_RS21495 () | 4401700..4402923 | - | 1224 | WP_001107214.1 | hypothetical protein | - |
| GBG22_RS21500 () | 4403024..4403908 | + | 885 | WP_001116802.1 | 50S ribosome-binding GTPase | - |
| GBG22_RS21505 () | 4404111..4404791 | + | 681 | WP_001593697.1 | WYL domain-containing protein | - |
| GBG22_RS21510 () | 4404939..4405616 | + | 678 | WP_001097306.1 | hypothetical protein | - |
| GBG22_RS21515 () | 4405622..4405855 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| GBG22_RS21520 () | 4405954..4406772 | + | 819 | WP_001234631.1 | DUF945 domain-containing protein | - |
| GBG22_RS21525 () | 4406854..4407333 | + | 480 | WP_000860065.1 | antirestriction protein | - |
| GBG22_RS21530 () | 4407345..4407821 | + | 477 | WP_001186710.1 | RadC family protein | - |
| GBG22_RS21535 () | 4407884..4408105 | + | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| GBG22_RS21540 () | 4408268..4408636 | + | 369 | WP_001278232.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| GBG22_RS21545 () | 4408726..4409100 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| GBG22_RS21550 () | 4409097..4409585 | + | 489 | WP_000777541.1 | hypothetical protein | - |
| GBG22_RS21555 () | 4409597..4409794 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| GBG22_RS21560 () | 4409891..4410028 | + | 138 | Protein_4220 | restriction endonuclease subunit M | - |
| GBG22_RS21565 () | 4410066..4411604 | - | 1539 | WP_000998059.1 | IS66 family transposase ISEc8 | Transposase |
| GBG22_RS21570 () | 4411654..4412001 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| GBG22_RS21575 () | 4411998..4412378 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| GBG22_RS21580 () | 4412473..4412910 | + | 438 | Protein_4224 | DUF4942 domain-containing protein | - |
| GBG22_RS21585 () | 4413659..4415197 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| GBG22_RS21590 () | 4415563..4416897 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GBG22_RS21595 () | 4416977..4419124 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| GBG22_RS21600 () | 4419183..4420640 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| GBG22_RS21605 () | 4420877..4422394 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| GBG22_RS21610 () | 4422513..4422686 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GBG22_RS21615 () | 4422714..4423010 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GBG22_RS21620 () | 4423239..4423511 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| GBG22_RS21625 () | 4423523..4423753 | - | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| GBG22_RS21630 () | 4423934..4425565 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| GBG22_RS21635 () | 4425562..4426281 | + | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|