MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP045206 Location: 3748527..3768881 Organism: Escherichia coli strain DE17 Replicon: chromosome
Accession: NZ_CP045206 Location: 3748527..3768881 Organism: Escherichia coli strain DE17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBG22_RS18400 () | 3743892..3744350 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| GBG22_RS18405 () | 3744611..3746068 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| GBG22_RS18410 () | 3746125..3746739 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| GBG22_RS18415 () | 3746736..3747875 | - | 1140 | WP_039267783.1 | RNA ligase RtcB family protein | - |
| GBG22_RS18420 () | 3748065..3748517 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| GBG22_RS18425 () | 3748527..3748925 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| GBG22_RS18430 () | 3748928..3749221 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| GBG22_RS18435 () | 3749273..3750328 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| GBG22_RS18440 () | 3750399..3751184 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| GBG22_RS18445 () | 3751156..3752868 | + | 1713 | Protein_3612 | Flagellar biosynthesis protein FlhA | VF |
| GBG22_RS18450 () | 3752947..3753105 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| GBG22_RS18455 () | 3753188..3753685 | - | 498 | WP_039267782.1 | REP-associated tyrosine transposase RayT | - |
| GBG22_RS18460 () | 3753861..3754610 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| GBG22_RS18465 () | 3754922..3755662 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| GBG22_RS18470 () | 3755633..3756400 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| GBG22_RS18475 () | 3756605..3757183 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| GBG22_RS18480 () | 3757423..3759867 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| GBG22_RS18485 () | 3759910..3760356 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| GBG22_RS18490 () | 3760537..3761307 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| GBG22_RS18495 () | 3761358..3761552 | - | 195 | Protein_3622 | transposase | - |
| GBG22_RS18500 () | 3761578..3762066 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| GBG22_RS18505 () | 3762160..3762663 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| GBG22_RS18510 () | 3762892..3763656 | - | 765 | Protein_3625 | ISAs1 family transposase ISEc1 | Transposase |
| GBG22_RS18515 () | 3763914..3764204 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| GBG22_RS18520 () | 3764179..3765618 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| GBG22_RS18525 () | 3765611..3766657 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| GBG22_RS18530 () | 3766764..3768746 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| GBG22_RS18535 () | 3768967..3769485 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| GBG22_RS18540 () | 3770191..3770694 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| GBG22_RS18545 () | 3770717..3772202 | + | 1486 | Protein_3632 | type VI secretion system contractile sheath large subunit | - |
| GBG22_RS18550 () | 3772207..3772632 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|