MGE detailed information
MGE type: Prophage MGE length: 26420 bp
Accession: NZ_CP045149 Location: 3243097..3269516 Organism: Yersinia pestis strain SCPM-O-DNA-18 (I-3113) Replicon: chromosome
Accession: NZ_CP045149 Location: 3243097..3269516 Organism: Yersinia pestis strain SCPM-O-DNA-18 (I-3113) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCK70_RS15420 () | 3238314..3239822 | + | 1509 | WP_002209903.1 | sugar ABC transporter ATP-binding protein | - |
| GCK70_RS15425 () | 3239894..3240898 | + | 1005 | WP_002209904.1 | sugar ABC transporter permease | - |
| GCK70_RS15430 () | 3241317..3242318 | + | 1002 | WP_002209906.1 | substrate-binding domain-containing protein | - |
| GCK70_RS15435 () | 3243097..3243615 | + | 519 | WP_002209907.1 | hypothetical protein | - |
| GCK70_RS15440 () | 3243991..3244848 | + | 858 | WP_002209908.1 | YaeF family permuted papain-like enzyme | - |
| GCK70_RS15445 () | 3245272..3245952 | + | 681 | WP_002209909.1 | PadR family transcriptional regulator | - |
| GCK70_RS15450 () | 3245952..3246272 | + | 321 | WP_002209910.1 | DUF3861 domain-containing protein | - |
| GCK70_RS15455 () | 3246355..3246660 | - | 306 | WP_002226101.1 | hypothetical protein | VF |
| GCK70_RS15460 () | 3246877..3247656 | - | 780 | WP_002209912.1 | hypothetical protein | - |
| GCK70_RS15470 () | 3248261..3249028 | - | 768 | WP_002209913.1 | DUF3142 domain-containing protein | - |
| GCK70_RS15475 () | 3248998..3251157 | - | 2160 | WP_002209914.1 | hypothetical protein | - |
| GCK70_RS15480 () | 3251567..3251851 | - | 285 | WP_002214798.1 | colicin immunity protein | - |
| GCK70_RS15485 () | 3251898..3252101 | - | 204 | WP_002209915.1 | hypothetical protein | - |
| GCK70_RS15490 () | 3252474..3252668 | - | 195 | WP_002214795.1 | hypothetical protein | - |
| GCK70_RS15495 () | 3252665..3254203 | - | 1539 | WP_002214794.1 | S-type pyocin domain-containing protein | - |
| GCK70_RS15500 () | 3254710..3255852 | - | 1143 | WP_002209918.1 | Fic family protein | - |
| GCK70_RS15505 () | 3256121..3256486 | + | 366 | WP_002209919.1 | hypothetical protein | - |
| GCK70_RS15510 () | 3256499..3256735 | + | 237 | WP_002214792.1 | hypothetical protein | - |
| GCK70_RS15515 () | 3256741..3257073 | + | 333 | WP_002214791.1 | hypothetical protein | - |
| GCK70_RS15520 () | 3257255..3257455 | + | 201 | WP_002209920.1 | AlpA family transcriptional regulator | - |
| GCK70_RS22880 () | 3257469..3257621 | - | 153 | WP_002209921.1 | hypothetical protein | - |
| GCK70_RS15525 () | 3257614..3257940 | - | 327 | WP_002209922.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GCK70_RS15530 () | 3258240..3260531 | + | 2292 | WP_002209923.1 | toprim domain-containing protein | - |
| GCK70_RS15535 () | 3260924..3261322 | - | 399 | WP_002209924.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| GCK70_RS15540 () | 3261322..3261618 | - | 297 | WP_002214787.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| GCK70_RS15545 () | 3261782..3262144 | - | 363 | WP_002209925.1 | helix-turn-helix domain-containing protein | - |
| GCK70_RS15550 () | 3262207..3262467 | - | 261 | WP_002214785.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GCK70_RS15555 () | 3263065..3263250 | + | 186 | WP_002209928.1 | hypothetical protein | - |
| GCK70_RS15560 () | 3263332..3264546 | - | 1215 | WP_002209929.1 | Prophage integrase IntS ; Integrase | Integrase |
| GCK70_RS15570 () | 3264979..3266496 | - | 1518 | WP_002209930.1 | lysine--tRNA ligase | - |
| GCK70_RS15580 () | 3267783..3269516 | - | 1734 | WP_002209931.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GCK70_RS15585 () | 3269523..3270239 | - | 717 | WP_002209932.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| GCK70_RS15590 () | 3270270..3271169 | - | 900 | WP_002209933.1 | site-specific tyrosine recombinase XerD | - |
| GCK70_RS15595 () | 3271276..3271794 | + | 519 | WP_002209934.1 | flavodoxin FldB | - |
| GCK70_RS15600 () | 3271884..3273341 | - | 1458 | WP_002220113.1 | cell envelope integrity protein CreD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|