MGE detailed information
MGE type: Prophage MGE length: 26429 bp
Accession: NZ_CP045145 Location: 3593120..3619548 Organism: Yersinia pestis strain SCPM-O-B-6899 (231) Replicon: chromosome
Accession: NZ_CP045145 Location: 3593120..3619548 Organism: Yersinia pestis strain SCPM-O-B-6899 (231) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCK69_RS16805 () | 3588321..3589829 | + | 1509 | WP_002209903.1 | sugar ABC transporter ATP-binding protein | - |
| GCK69_RS16810 () | 3589901..3590905 | + | 1005 | WP_002209904.1 | sugar ABC transporter permease | - |
| GCK69_RS16815 () | 3591340..3592341 | + | 1002 | WP_002209906.1 | substrate-binding domain-containing protein | - |
| GCK69_RS16820 () | 3593120..3593638 | + | 519 | WP_002209907.1 | hypothetical protein | - |
| GCK69_RS16825 () | 3594014..3594871 | + | 858 | WP_002209908.1 | YaeF family permuted papain-like enzyme | - |
| GCK69_RS16830 () | 3595295..3595975 | + | 681 | WP_002209909.1 | PadR family transcriptional regulator | - |
| GCK69_RS16835 () | 3595975..3596295 | + | 321 | WP_002209910.1 | DUF3861 domain-containing protein | - |
| GCK69_RS16840 () | 3596378..3596683 | - | 306 | WP_002226101.1 | hypothetical protein | VF |
| GCK69_RS16845 () | 3596900..3597679 | - | 780 | WP_002209912.1 | hypothetical protein | - |
| GCK69_RS16855 () | 3598284..3599051 | - | 768 | WP_002209913.1 | DUF3142 domain-containing protein | - |
| GCK69_RS16860 () | 3599021..3601180 | - | 2160 | WP_002209914.1 | hypothetical protein | - |
| GCK69_RS16865 () | 3601590..3601874 | - | 285 | WP_002214798.1 | colicin immunity protein | - |
| GCK69_RS16870 () | 3601921..3602124 | - | 204 | WP_002209915.1 | hypothetical protein | - |
| GCK69_RS16875 () | 3602497..3602691 | - | 195 | WP_002214795.1 | hypothetical protein | - |
| GCK69_RS16880 () | 3602688..3604226 | - | 1539 | WP_002214794.1 | S-type pyocin domain-containing protein | - |
| GCK69_RS16885 () | 3604733..3605875 | - | 1143 | WP_002209918.1 | Fic family protein | - |
| GCK69_RS16890 () | 3606144..3606509 | + | 366 | WP_002209919.1 | hypothetical protein | - |
| GCK69_RS16895 () | 3606522..3606758 | + | 237 | WP_002214792.1 | hypothetical protein | - |
| GCK69_RS16900 () | 3606764..3607096 | + | 333 | WP_002214791.1 | hypothetical protein | - |
| GCK69_RS16905 () | 3607278..3607478 | + | 201 | WP_002209920.1 | AlpA family transcriptional regulator | - |
| GCK69_RS22965 () | 3607492..3607644 | - | 153 | WP_002209921.1 | hypothetical protein | - |
| GCK69_RS16910 () | 3607637..3607963 | - | 327 | WP_002209922.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GCK69_RS16915 () | 3608263..3610554 | + | 2292 | WP_002209923.1 | toprim domain-containing protein | - |
| GCK69_RS16920 () | 3610956..3611354 | - | 399 | WP_002209924.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| GCK69_RS16925 () | 3611354..3611650 | - | 297 | WP_002214787.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| GCK69_RS16930 () | 3611814..3612176 | - | 363 | WP_002209925.1 | helix-turn-helix domain-containing protein | - |
| GCK69_RS16935 () | 3612239..3612499 | - | 261 | WP_002214785.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GCK69_RS16940 () | 3613097..3613282 | + | 186 | WP_002209928.1 | hypothetical protein | - |
| GCK69_RS16945 () | 3613364..3614578 | - | 1215 | WP_002209929.1 | Prophage integrase IntS ; Integrase | Integrase |
| GCK69_RS16955 () | 3615011..3616528 | - | 1518 | WP_002209930.1 | lysine--tRNA ligase | - |
| GCK69_RS16965 () | 3617815..3619548 | - | 1734 | WP_002209931.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GCK69_RS16970 () | 3619555..3620271 | - | 717 | WP_002209932.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| GCK69_RS16975 () | 3620302..3621201 | - | 900 | WP_002209933.1 | site-specific tyrosine recombinase XerD | - |
| GCK69_RS16980 () | 3621308..3621826 | + | 519 | WP_002209934.1 | flavodoxin FldB | - |
| GCK69_RS16985 () | 3621916..3623373 | - | 1458 | WP_002220113.1 | cell envelope integrity protein CreD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|