MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 30804 bp
Accession: NZ_CP045097 Location: 2705796..2736599 Organism: Pectobacterium carotovorum strain RC5297 Replicon: chromosome
Accession: NZ_CP045097 Location: 2705796..2736599 Organism: Pectobacterium carotovorum strain RC5297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9W95_RS11895 (F9W95_11965) | 2701674..2702024 | + | 351 | WP_109226038.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| F9W95_RS11900 (F9W95_11970) | 2702052..2702444 | - | 393 | WP_109226063.1 | helix-turn-helix domain-containing protein | - |
| F9W95_RS11905 (F9W95_11975) | 2702534..2702959 | + | 426 | WP_240004271.1 | DoxX family protein | - |
| F9W95_RS11910 (F9W95_11980) | 2703079..2703714 | + | 636 | WP_233978840.1 | NAD(P)H-binding protein | - |
| F9W95_RS11915 (F9W95_11985) | 2703782..2704375 | - | 594 | WP_130638465.1 | flavodoxin | - |
| F9W95_RS11920 (F9W95_11990) | 2704428..2705627 | - | 1200 | WP_180783007.1 | multidrug effflux MFS transporter | - |
| F9W95_RS11925 (F9W95_11995) | 2705796..2707031 | - | 1236 | WP_130621961.1 | Riboflavin transporter RibZ | VF |
| F9W95_RS11930 (F9W95_12000) | 2707098..2707553 | + | 456 | WP_040030942.1 | helix-turn-helix domain-containing protein | - |
| F9W95_RS11935 (F9W95_12005) | 2707766..2709202 | + | 1437 | WP_205539188.1 | 6-phospho-beta-glucosidase | - |
| F9W95_RS11940 (F9W95_12010) | 2709486..2715062 | + | 5577 | WP_109226043.1 | DUF3320 domain-containing protein | - |
| F9W95_RS11945 (F9W95_12015) | 2715417..2715899 | + | 483 | WP_040030778.1 | cold shock domain-containing protein | - |
| F9W95_RS11950 (F9W95_12020) | 2716078..2716617 | + | 540 | WP_039506966.1 | DUF2058 domain-containing protein | - |
| F9W95_RS11955 (F9W95_12025) | 2716758..2718467 | - | 1710 | WP_232835216.1 | diguanylate cyclase DgcJ | - |
| F9W95_RS11960 (F9W95_12030) | 2718503..2718748 | + | 246 | WP_119158547.1 | YmjA family protein | - |
| F9W95_RS11965 (F9W95_12035) | 2718987..2720018 | - | 1032 | WP_116362863.1 | methionine synthase | - |
| F9W95_RS11970 (F9W95_12040) | 2720049..2721026 | - | 978 | WP_240004272.1 | DUF1852 domain-containing protein | - |
| F9W95_RS11975 (F9W95_12045) | 2721524..2721868 | - | 345 | WP_116362861.1 | gamma-glutamylcyclotransferase family protein | - |
| F9W95_RS11980 (F9W95_12055) | 2722417..2722836 | + | 420 | Protein_2332 | 2-dehydropantoate 2-reductase N-terminal domain-containing protein | - |
| F9W95_RS11985 (F9W95_12060) | 2722892..2723281 | + | 390 | Protein_2333 | ArdC family protein | - |
| F9W95_RS11990 (F9W95_12065) | 2723424..2723660 | + | 237 | WP_039536802.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| F9W95_RS11995 (F9W95_12070) | 2723663..2723977 | + | 315 | WP_039353430.1 | CcdB family protein | Toxin Detail |
| F9W95_RS12000 (F9W95_12075) | 2724011..2724178 | - | 168 | Protein_2336 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| F9W95_RS12005 (F9W95_12085) | 2724701..2726194 | + | 1494 | WP_229763820.1 | RES family NAD+ phosphorylase | - |
| F9W95_RS12010 (F9W95_12090) | 2726401..2727453 | + | 1053 | WP_116585877.1 | MBL fold metallo-hydrolase | - |
| F9W95_RS12015 (F9W95_12100) | 2727660..2728685 | + | 1026 | WP_120358785.1 | IS630 family transposase ISPlu19 | Transposase |
| F9W95_RS12020 (F9W95_12105) | 2728765..2729850 | + | 1086 | WP_240004273.1 | serine protease | - |
| F9W95_RS12025 (F9W95_12110) | 2729834..2730304 | + | 471 | WP_240004274.1 | hypothetical protein | - |
| F9W95_RS12030 (F9W95_12115) | 2730394..2731587 | + | 1194 | WP_103863058.1 | IS4 family transposase ISSfl1 | Transposase |
| F9W95_RS12035 (F9W95_12120) | 2731885..2732778 | + | 894 | WP_116585845.1 | LysR family transcriptional regulator | - |
| F9W95_RS12040 (F9W95_12125) | 2732969..2733346 | + | 378 | WP_039356961.1 | DUF1330 domain-containing protein | - |
| F9W95_RS12045 (F9W95_12130) | 2733409..2734485 | + | 1077 | WP_116585844.1 | alpha/beta hydrolase | - |
| F9W95_RS12050 (F9W95_12135) | 2734633..2734875 | + | 243 | WP_116585843.1 | Sec-independent protein translocase subunit TatA | - |
| F9W95_RS12055 (F9W95_12140) | 2734889..2735191 | + | 303 | WP_100016624.1 | helix-turn-helix transcriptional regulator | - |
| F9W95_RS12060 (F9W95_12145) | 2735328..2736599 | - | 1272 | WP_240004275.1 | Prophage integrase IntA ; Integrase | Integrase |
| F9W95_RS12070 (F9W95_12155) | 2736947..2737744 | - | 798 | WP_103941204.1 | DgsA anti-repressor MtfA | - |
| F9W95_RS12080 (F9W95_12165) | 2737985..2738371 | - | 387 | WP_119158553.1 | lysozyme inhibitor LprI family protein | - |
| F9W95_RS12085 (F9W95_12170) | 2738442..2738583 | - | 142 | Protein_2351 | IS5/IS1182 family transposase | - |
| F9W95_RS12090 (F9W95_12175) | 2738758..2740179 | - | 1422 | WP_119158554.1 | hypothetical protein | - |
| F9W95_RS12095 (F9W95_12180) | 2740315..2740605 | + | 291 | WP_232835219.1 | hypothetical protein | - |
| F9W95_RS12100 (F9W95_12185) | 2740691..2741113 | + | 423 | WP_223878558.1 | DUF2946 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|