MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103494 bp
Accession: NZ_CP045002 Location: 5382594..5486087 Organism: Pseudomonas aeruginosa strain PAG5 Replicon: chromosome
Accession: NZ_CP045002 Location: 5382594..5486087 Organism: Pseudomonas aeruginosa strain PAG5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9C43_RS25000 () | 5378184..5382365 | + | 4182 | WP_096066916.1 | two-partner secretion system exoprotein TpsA4 | - |
| F9C43_RS25010 () | 5382736..5383602 | + | 867 | WP_003111785.1 | ParA family protein | - |
| F9C43_RS25015 () | 5383604..5384341 | + | 738 | WP_023103760.1 | hypothetical protein | - |
| F9C43_RS25020 () | 5384338..5384835 | + | 498 | WP_021263371.1 | hypothetical protein | - |
| F9C43_RS25025 () | 5384841..5385587 | + | 747 | WP_031300027.1 | hypothetical protein | - |
| F9C43_RS25030 () | 5385584..5386270 | + | 687 | WP_003455806.1 | hypothetical protein | - |
| F9C43_RS25035 () | 5386270..5386971 | + | 702 | WP_021263369.1 | DUF2786 domain-containing protein | - |
| F9C43_RS25040 () | 5386968..5387675 | + | 708 | WP_033997669.1 | HNH endonuclease | - |
| F9C43_RS25045 () | 5387659..5387883 | + | 225 | WP_023980496.1 | hypothetical protein | - |
| F9C43_RS25050 () | 5387880..5389223 | + | 1344 | WP_024947652.1 | replicative DNA helicase | - |
| F9C43_RS25055 () | 5389662..5390108 | - | 447 | WP_024947653.1 | hypothetical protein | - |
| F9C43_RS25060 () | 5390286..5390471 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| F9C43_RS25065 () | 5390461..5390988 | + | 528 | WP_003141385.1 | hypothetical protein | - |
| F9C43_RS25070 () | 5390985..5391242 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| F9C43_RS25075 () | 5391235..5391474 | + | 240 | WP_003111775.1 | hypothetical protein | - |
| F9C43_RS25080 () | 5391467..5391700 | + | 234 | WP_003111774.1 | hypothetical protein | - |
| F9C43_RS25085 () | 5391700..5392722 | + | 1023 | WP_024947655.1 | nucleoid-associated protein YejK | - |
| F9C43_RS25090 () | 5392719..5393609 | + | 891 | WP_024947656.1 | DNA adenine methylase | - |
| F9C43_RS25095 () | 5393630..5393899 | + | 270 | WP_023103768.1 | Arc family DNA-binding protein | - |
| F9C43_RS25100 () | 5393896..5395629 | + | 1734 | WP_024947657.1 | ParB family protein | - |
| F9C43_RS25105 () | 5395657..5396412 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| F9C43_RS25110 () | 5396415..5397740 | + | 1326 | WP_031300023.1 | hypothetical protein | - |
| F9C43_RS25115 () | 5398941..5399138 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| F9C43_RS25120 () | 5399295..5400023 | + | 729 | WP_024947304.1 | TIGR03761 family integrating conjugative element protein | - |
| F9C43_RS25125 () | 5400029..5400577 | + | 549 | WP_021263360.1 | DUF3158 family protein | - |
| F9C43_RS25130 () | 5400625..5401467 | + | 843 | WP_023098075.1 | Rha family transcriptional regulator | - |
| F9C43_RS25135 () | 5401497..5401985 | + | 489 | WP_003117042.1 | single-stranded DNA-binding protein | - |
| F9C43_RS25140 () | 5402401..5402568 | + | 168 | WP_147318654.1 | CrpP family protein | - |
| F9C43_RS25145 () | 5402684..5404603 | + | 1920 | WP_023093022.1 | type I DNA topoisomerase | - |
| F9C43_RS25150 () | 5404612..5405364 | + | 753 | WP_033963817.1 | hypothetical protein | - |
| F9C43_RS25155 () | 5405684..5407573 | + | 1890 | WP_023082043.1 | hypothetical protein | - |
| F9C43_RS25160 () | 5407570..5409543 | + | 1974 | WP_003149516.1 | DEAD/DEAH box helicase | - |
| F9C43_RS25165 () | 5409631..5410755 | + | 1125 | WP_015503578.1 | TcpQ domain-containing protein | - |
| F9C43_RS25170 () | 5410755..5412464 | + | 1710 | WP_003123331.1 | PilN family type IVB pilus formation outer membrane protein | - |
| F9C43_RS25175 () | 5412468..5413793 | + | 1326 | WP_033942384.1 | type 4b pilus protein PilO2 | - |
| F9C43_RS25180 () | 5413783..5414316 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| F9C43_RS25185 () | 5414325..5415905 | + | 1581 | WP_033963826.1 | Flp pilus assembly complex ATPase component TadA | - |
| F9C43_RS25190 () | 5415905..5416984 | + | 1080 | WP_003109360.1 | type II secretion system F family protein | - |
| F9C43_RS25195 () | 5417006..5417536 | + | 531 | WP_003099765.1 | pilus assembly protein PilX | - |
| F9C43_RS25200 () | 5417533..5418489 | + | 957 | WP_003117051.1 | Flp pilus assembly complex ATPase component TadA | - |
| F9C43_RS25205 () | 5418482..5419861 | + | 1380 | WP_003117053.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| F9C43_RS25210 () | 5419879..5420316 | + | 438 | WP_003117054.1 | type IV pilus biogenesis protein PilM | - |
| F9C43_RS34170 () | 5421379..5421624 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| F9C43_RS25220 () | 5421699..5421872 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| F9C43_RS25225 () | 5422333..5422812 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| F9C43_RS25230 () | 5422950..5423108 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| F9C43_RS25235 () | 5423182..5423379 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| F9C43_RS25240 () | 5423864..5424571 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| F9C43_RS25245 () | 5424807..5425157 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| F9C43_RS25250 () | 5425214..5425846 | + | 633 | WP_003117059.1 | DUF3275 family protein | - |
| F9C43_RS25255 () | 5425843..5426118 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| F9C43_RS25260 () | 5426188..5426550 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| F9C43_RS25265 () | 5426618..5426872 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| F9C43_RS25270 () | 5426965..5427570 | + | 606 | WP_003117063.1 | hypothetical protein | - |
| F9C43_RS25275 () | 5427600..5429045 | + | 1446 | WP_003117064.1 | class I SAM-dependent methyltransferase | - |
| F9C43_RS25280 () | 5429150..5431399 | + | 2250 | WP_124083106.1 | DEAD/DEAH box helicase | - |
| F9C43_RS25285 () | 5431533..5432633 | - | 1101 | WP_121496493.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| F9C43_RS25290 () | 5432617..5433858 | - | 1242 | WP_023102693.1 | MFS transporter | - |
| F9C43_RS34230 () | 5433855..5436119 | - | 2265 | WP_202886027.1 | glycoside hydrolase family 65 protein | - |
| F9C43_RS25300 () | 5436113..5437159 | - | 1047 | WP_121496492.1 | NAD(P)-dependent oxidoreductase | - |
| F9C43_RS25305 () | 5437152..5437826 | - | 675 | WP_124083107.1 | hypothetical protein | - |
| F9C43_RS25310 () | 5437838..5438320 | - | 483 | WP_121496490.1 | adenylyltransferase/cytidyltransferase family protein | - |
| F9C43_RS25315 () | 5438328..5438831 | - | 504 | WP_121496489.1 | GNAT family N-acetyltransferase | - |
| F9C43_RS25320 () | 5438821..5440134 | - | 1314 | WP_162950080.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| F9C43_RS25325 () | 5440820..5441095 | - | 276 | WP_121496487.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F9C43_RS25330 () | 5441095..5441367 | - | 273 | WP_121496486.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| F9C43_RS25335 () | 5441627..5442187 | + | 561 | WP_023102601.1 | recombinase family protein | - |
| F9C43_RS25340 () | 5442244..5442969 | - | 726 | WP_188129804.1 | hypothetical protein | - |
| F9C43_RS25345 () | 5443001..5443666 | - | 666 | WP_121496494.1 | DUF3218 family protein | - |
| F9C43_RS25350 () | 5443677..5444708 | - | 1032 | WP_121496485.1 | hypothetical protein | - |
| F9C43_RS25355 () | 5445052..5446032 | - | 981 | WP_010466230.1 | IS5-like element IS1384 family transposase | - |
| F9C43_RS25360 () | 5446150..5449116 | + | 2967 | Protein_4998 | Tn3 family transposase | - |
| F9C43_RS25365 () | 5449586..5449696 | + | 111 | Protein_4999 | IS5/IS1182 family transposase | - |
| F9C43_RS25370 () | 5449925..5450785 | - | 861 | WP_121496484.1 | cytolethal distending toxin subunit B family protein | - |
| F9C43_RS25375 () | 5450802..5451338 | - | 537 | WP_121496483.1 | hypothetical protein | - |
| F9C43_RS25380 () | 5451750..5452412 | + | 663 | WP_121496482.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| F9C43_RS25385 () | 5453050..5453739 | + | 690 | WP_121496480.1 | methyl-accepting chemotaxis protein | - |
| F9C43_RS25390 () | 5453750..5454505 | + | 756 | WP_121496479.1 | TIGR03759 family integrating conjugative element protein | - |
| F9C43_RS25395 () | 5454490..5455071 | + | 582 | WP_121496478.1 | lytic transglycosylase domain-containing protein | - |
| F9C43_RS25400 () | 5455068..5455568 | + | 501 | WP_042933800.1 | integrating conjugative element protein | - |
| F9C43_RS25405 () | 5455577..5455846 | + | 270 | WP_015503603.1 | hypothetical protein | - |
| F9C43_RS25410 () | 5455850..5458081 | + | 2232 | WP_124083110.1 | type IV conjugative transfer system coupling protein TraD | - |
| F9C43_RS25415 () | 5458081..5458827 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| F9C43_RS25420 () | 5458845..5459336 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| F9C43_RS25425 () | 5459578..5461059 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| F9C43_RS25430 () | 5461191..5462300 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| F9C43_RS25435 () | 5462346..5462657 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| F9C43_RS25440 () | 5462830..5463129 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| F9C43_RS25445 () | 5463223..5463561 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| F9C43_RS25450 () | 5463558..5463797 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| F9C43_RS25455 () | 5463815..5464171 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| F9C43_RS25460 () | 5464182..5464568 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| F9C43_RS25465 () | 5464565..5465224 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| F9C43_RS25470 () | 5465221..5466105 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| F9C43_RS25475 () | 5466089..5467594 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| F9C43_RS25480 () | 5467572..5468015 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| F9C43_RS25485 () | 5468015..5470957 | + | 2943 | WP_010792229.1 | conjugative transfer ATPase | - |
| F9C43_RS25490 () | 5470954..5471238 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| F9C43_RS25495 () | 5471235..5471894 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| F9C43_RS25500 () | 5471891..5472109 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| F9C43_RS25510 () | 5474246..5474677 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| F9C43_RS25515 () | 5474677..5475615 | + | 939 | WP_003117084.1 | TIGR03756 family integrating conjugative element protein | - |
| F9C43_RS25520 () | 5475633..5477021 | + | 1389 | WP_004352770.1 | integrating conjugative element protein | - |
| F9C43_RS25525 () | 5477021..5477365 | + | 345 | WP_003456714.1 | hypothetical protein | - |
| F9C43_RS25530 () | 5477362..5478873 | + | 1512 | WP_023082060.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| F9C43_RS25535 () | 5478911..5479264 | - | 354 | WP_165567195.1 | hypothetical protein | - |
| F9C43_RS25540 () | 5479380..5479652 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| F9C43_RS25545 () | 5479656..5480006 | + | 351 | WP_003117088.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F9C43_RS25550 () | 5480179..5480409 | + | 231 | WP_021264354.1 | hypothetical protein | - |
| F9C43_RS25555 () | 5480630..5481979 | + | 1350 | WP_023082061.1 | SH3 domain-containing protein | - |
| F9C43_RS25560 () | 5482477..5484396 | + | 1920 | WP_003456726.1 | helicase/relaxase domain-containing protein | - |
| F9C43_RS25565 () | 5484393..5485673 | + | 1281 | WP_003456729.1 | site-specific integrase | - |
| F9C43_RS25585 () | 5486525..5489089 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| F9C43_RS25590 () | 5489245..5489973 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| F9C43_RS25595 () | 5489970..5490932 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|