MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93724 bp
Accession: NZ_CP044969 Location: 1..93724 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS007098 Replicon: plasmid PNCS007098 strain 14[5]12:i:-
Accession: NZ_CP044969 Location: 1..93724 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS007098 Replicon: plasmid PNCS007098 strain 14[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5O06_RS24740 () | 537..1134 | + | 598 | Protein_1 | conjugal transfer protein TraP | - |
| E5O06_RS24745 () | 1112..1357 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E5O06_RS24750 () | 1354..1869 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E5O06_RS24755 () | 2004..2225 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E5O06_RS24760 () | 2218..2685 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| E5O06_RS24765 () | 2802..3065 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| E5O06_RS24770 () | 3081..5729 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E5O06_RS24775 () | 5704..6090 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E5O06_RS24780 () | 6087..6719 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E5O06_RS24785 () | 6716..7708 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E5O06_RS24790 () | 7727..8035 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| E5O06_RS24795 () | 8020..8658 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E5O06_RS24800 () | 8695..9114 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| E5O06_RS24805 () | 9111..10937 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E5O06_RS24810 () | 10948..11163 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E5O06_RS24815 () | 11175..11924 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E5O06_RS24820 () | 12138..12431 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E5O06_RS24825 () | 12418..12966 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E5O06_RS24830 () | 12956..14338 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E5O06_RS24835 () | 14335..17157 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E5O06_RS24840 () | 17173..17667 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| E5O06_RS24845 () | 17703..18434 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| E5O06_RS24850 () | 18811..20973 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| E5O06_RS24855 () | 20982..21380 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E5O06_RS24860 () | 21380..21607 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E5O06_RS24865 () | 21689..26947 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| E5O06_RS24870 () | 26967..27707 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E5O06_RS24875 () | 27762..28325 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E5O06_RS24880 () | 28440..28724 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| E5O06_RS24885 () | 28737..28892 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| E5O06_RS24890 () | 29058..29500 | + | 443 | Protein_31 | phospholipase | - |
| E5O06_RS24900 () | 29679..29945 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E5O06_RS24905 () | 30195..30272 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E5O06_RS24910 () | 30253..31134 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E5O06_RS24920 () | 31994..32215 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E5O06_RS24925 () | 32312..33070 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E5O06_RS24930 () | 33337..33894 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E5O06_RS24935 () | 33984..34883 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| E5O06_RS25455 () | 34880..35026 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| E5O06_RS24940 () | 35016..35669 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| E5O06_RS24945 () | 35914..36264 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E5O06_RS24950 () | 36249..36461 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E5O06_RS24955 () | 36893..37768 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| E5O06_RS24960 () | 38021..38578 | - | 558 | WP_010999940.1 | membrane protein | - |
| E5O06_RS24965 () | 38593..39285 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E5O06_RS24970 () | 39278..41686 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E5O06_RS24975 () | 41914..42432 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| E5O06_RS24980 () | 42707..43009 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E5O06_RS24990 () | 43728..44109 | + | 382 | Protein_49 | YgiW/YdeI family stress tolerance OB fold protein | - |
| E5O06_RS24995 () | 44278..44722 | + | 445 | Protein_50 | site-specific integrase | - |
| E5O06_RS25000 () | 44981..45970 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E5O06_RS25005 () | 46464..46760 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| E5O06_RS25015 () | 47244..47765 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| E5O06_RS25020 () | 48441..48659 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E5O06_RS25025 () | 48661..48966 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E5O06_RS25030 () | 48968..49258 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| E5O06_RS25035 () | 49255..49776 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| E5O06_RS25040 () | 49811..50593 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| E5O06_RS25045 () | 50602..51315 | + | 714 | Protein_59 | EAL domain-containing protein | - |
| E5O06_RS25055 () | 51319..51828 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E5O06_RS25060 () | 51822..52307 | + | 486 | WP_000905606.1 | membrane protein | - |
| E5O06_RS25065 () | 52584..52871 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| E5O06_RS25070 () | 53027..53587 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E5O06_RS25075 () | 53654..54004 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E5O06_RS25080 () | 54061..54485 | + | 425 | Protein_65 | IS200/IS605 family transposase | - |
| E5O06_RS25085 () | 54612..55262 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E5O06_RS25090 () | 55523..56248 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E5O06_RS25095 () | 56529..58304 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E5O06_RS25460 () | 58356..58523 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| E5O06_RS25100 () | 58486..59253 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| E5O06_RS25105 () | 59427..59591 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E5O06_RS25110 () | 59765..60658 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E5O06_RS25115 () | 61267..62304 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E5O06_RS25120 () | 62493..63518 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| E5O06_RS25125 () | 63451..65115 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E5O06_RS25130 () | 65099..65659 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| E5O06_RS25135 () | 65866..66606 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E5O06_RS25145 () | 67261..67749 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| E5O06_RS25150 () | 68008..69123 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E5O06_RS25155 () | 69209..69625 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| E5O06_RS25160 () | 69809..70144 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| E5O06_RS25165 () | 70201..70767 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E5O06_RS25170 () | 70799..71740 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5O06_RS25175 () | 72155..73360 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E5O06_RS25180 () | 73360..74334 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O06_RS25185 () | 74416..75690 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| E5O06_RS25190 () | 75690..76112 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5O06_RS25195 () | 76623..77093 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| E5O06_RS25200 () | 77086..77442 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| E5O06_RS25210 () | 77824..78504 | + | 681 | WP_000088645.1 | DNA methylase | - |
| E5O06_RS25215 () | 78504..78725 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| E5O06_RS25220 () | 78781..79194 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E5O06_RS25225 () | 79266..80030 | + | 765 | WP_001246548.1 | membrane protein | - |
| E5O06_RS25235 () | 80526..80960 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| E5O06_RS25240 () | 81027..81461 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E5O06_RS25245 () | 81697..82020 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E5O06_RS25255 () | 82727..83245 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E5O06_RS25260 () | 83300..83542 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E5O06_RS25265 () | 83611..85608 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O06_RS25270 () | 85648..86082 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E5O06_RS25275 () | 86079..86816 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E5O06_RS25465 () | 87065..87223 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| E5O06_RS25470 () | 87326..88144 | + | 819 | Protein_103 | DUF945 domain-containing protein | - |
| E5O06_RS25290 () | 88455..88925 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E5O06_RS25300 () | 89340..89720 | + | 381 | WP_136571529.1 | relaxosome protein TraM | - |
| E5O06_RS25305 () | 89913..90599 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E5O06_RS25310 () | 90693..90920 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E5O06_RS25315 () | 90962..91324 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E5O06_RS25320 () | 91339..91650 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| E5O06_RS25325 () | 91672..92238 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| E5O06_RS25330 () | 92225..92965 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|