MGE detailed information
MGE type: Conjugative plasmid MGE length: 106879 bp
Accession: NZ_CP044551 Location: 1..106879 Organism: Hydrogenophaga sp. BPS33 Replicon: plasmid pBPS33-2
Accession: NZ_CP044551 Location: 1..106879 Organism: Hydrogenophaga sp. BPS33 Replicon: plasmid pBPS33-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9K07_RS30990 () | 1..1212 | + | 1212 | WP_159597424.1 | plasmid encoded RepA protein | - |
| F9K07_RS30995 () | 1209..1688 | + | 480 | WP_159597425.1 | thermonuclease family protein | - |
| F9K07_RS31000 () | 1698..1913 | + | 216 | WP_046534443.1 | hypothetical protein | - |
| F9K07_RS31005 () | 2208..2729 | + | 522 | WP_159597426.1 | DNA repair protein RadC | - |
| F9K07_RS31010 () | 3826..4053 | + | 228 | WP_159597460.1 | stable inheritance protein KleA | - |
| F9K07_RS31015 () | 4114..4920 | + | 807 | WP_159597427.1 | DUF3560 domain-containing protein | - |
| F9K07_RS31020 () | 5007..5189 | + | 183 | WP_159597428.1 | hypothetical protein | - |
| F9K07_RS31025 () | 5193..5588 | + | 396 | WP_070697979.1 | hypothetical protein | - |
| F9K07_RS31030 () | 5613..5906 | + | 294 | WP_159597429.1 | hypothetical protein | - |
| F9K07_RS31035 () | 6013..6978 | + | 966 | WP_159597461.1 | hypothetical protein | - |
| F9K07_RS31040 () | 7161..8147 | + | 987 | WP_159597430.1 | RepB family DNA primase | - |
| F9K07_RS31045 () | 8881..9237 | + | 357 | WP_070697982.1 | single-stranded DNA-binding protein | - |
| F9K07_RS31050 () | 9238..9627 | + | 390 | WP_081340476.1 | hypothetical protein | - |
| F9K07_RS31055 () | 9634..10428 | + | 795 | WP_070697983.1 | ParA family protein | - |
| F9K07_RS31060 () | 10428..11570 | + | 1143 | WP_159597431.1 | ParB/RepB/Spo0J family partition protein | - |
| F9K07_RS31065 () | 12112..12711 | + | 600 | WP_070697986.1 | hypothetical protein | Relaxase |
| F9K07_RS31070 () | 12698..13783 | + | 1086 | WP_159597432.1 | T-DNA border endonuclease VirD2 | Relaxase |
| F9K07_RS31075 () | 13998..16913 | + | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31080 () | 17056..17457 | + | 402 | Protein_19 | IS91 family transposase ISPps1 | Transposase |
| F9K07_RS31085 () | 17640..17957 | + | 318 | Protein_20 | acetaldehyde dehydrogenase (acetylating) | - |
| F9K07_RS31090 () | 17971..19035 | + | 1065 | WP_053281476.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| F9K07_RS31095 () | 19032..19786 | + | 755 | Protein_22 | SDR family oxidoreductase | - |
| F9K07_RS31100 () | 19895..20809 | + | 915 | WP_053281475.1 | transporter | - |
| F9K07_RS31105 () | 20986..21192 | - | 207 | WP_053281474.1 | hypothetical protein | - |
| F9K07_RS31110 () | 21630..23168 | + | 1539 | WP_159597433.1 | IS91 family transposase ISPps1 | Transposase |
| F9K07_RS31115 () | 23460..23786 | + | 327 | Protein_26 | transmembrane anchor protein | - |
| F9K07_RS31120 () | 23839..24879 | + | 1041 | WP_159597434.1 | DMT family transporter | - |
| F9K07_RS31125 () | 24996..26414 | - | 1419 | WP_159597435.1 | Multidrug/solvent efflux pump outer membrane protein MepC | VF |
| F9K07_RS31130 () | 26411..28807 | - | 2397 | Protein_29 | Multidrug resistance protein MexB | VF |
| F9K07_RS31135 () | 28952..30172 | + | 1221 | Protein_30 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31140 () | 30352..32049 | + | 1698 | Protein_31 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31145 () | 32198..32602 | + | 405 | WP_159597436.1 | IS66 family transposase ISAba17 | Transposase |
| F9K07_RS31150 () | 32620..33126 | + | 507 | WP_068673276.1 | hypothetical protein | - |
| F9K07_RS31155 () | 33172..33480 | - | 309 | WP_083944095.1 | LysR family transcriptional regulator | - |
| F9K07_RS31160 () | 33932..34630 | - | 699 | WP_068673274.1 | dienelactone hydrolase family protein | - |
| F9K07_RS31165 () | 34623..35801 | - | 1179 | WP_068673272.1 | muconate cycloisomerase family protein | - |
| F9K07_RS31170 () | 35803..36882 | - | 1080 | WP_068673271.1 | maleylacetate reductase | - |
| F9K07_RS31175 () | 36892..37227 | - | 336 | WP_068673269.1 | hypothetical protein | - |
| F9K07_RS31180 () | 37241..37789 | - | 549 | WP_083944094.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| F9K07_RS31185 () | 37848..38795 | - | 948 | WP_159597437.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| F9K07_RS31190 () | 39179..39925 | - | 747 | WP_068673263.1 | hypothetical protein | - |
| F9K07_RS31195 () | 40428..41075 | + | 648 | WP_159597438.1 | HTH-type transcriptional regulator TfdS | VF |
| F9K07_RS31200 () | 41194..44109 | + | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31205 () | 44395..45408 | - | 1014 | WP_032490114.1 | ferredoxin--NADP reductase | - |
| F9K07_RS31210 () | 45420..46064 | - | 645 | WP_083944717.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| F9K07_RS31215 () | 46061..47410 | - | 1350 | WP_159597439.1 | Rieske 2Fe-2S domain-containing protein | - |
| F9K07_RS31220 () | 47447..48208 | - | 762 | WP_159597440.1 | type 1 glutamine amidotransferase | - |
| F9K07_RS31225 () | 48327..49805 | - | 1479 | WP_159597441.1 | glutamine synthetase family protein | - |
| F9K07_RS31230 () | 50083..52431 | + | 2349 | WP_068685872.1 | indolepyruvate ferredoxin oxidoreductase subunit alpha | - |
| F9K07_RS31235 () | 52508..53320 | + | 813 | Protein_50 | indolepyruvate oxidoreductase subunit beta family protein | - |
| F9K07_RS31240 () | 53468..56381 | + | 2914 | Protein_51 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31245 () | 56524..56889 | - | 366 | Protein_52 | DNA-binding protein | - |
| F9K07_RS31250 () | 57068..58117 | - | 1050 | WP_011114060.1 | ParB/RepB/Spo0J family partition protein | - |
| F9K07_RS31255 () | 58114..58878 | - | 765 | WP_011114061.1 | ParA family protein | - |
| F9K07_RS31260 () | 58875..59183 | - | 309 | WP_011114062.1 | KorA protein | - |
| F9K07_RS31265 () | 59290..59619 | - | 330 | WP_011114064.1 | DUF2761 domain-containing protein | - |
| F9K07_RS31270 () | 59621..59947 | - | 327 | WP_011114065.1 | hypothetical protein | - |
| F9K07_RS31275 () | 60156..60392 | - | 237 | WP_011114066.1 | stable inheritance protein KleA | - |
| F9K07_RS31280 () | 60550..60807 | - | 258 | WP_011114067.1 | hypothetical protein | - |
| F9K07_RS31285 () | 60824..62032 | - | 1209 | WP_011114068.1 | hypothetical protein | - |
| F9K07_RS31290 () | 62044..62307 | - | 264 | WP_011296181.1 | hypothetical protein | - |
| F9K07_RS31295 () | 62307..62735 | - | 429 | WP_011114069.1 | antirestriction protein | - |
| F9K07_RS31300 () | 62908..63171 | + | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| F9K07_RS31305 () | 63158..63439 | + | 282 | WP_011114071.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| F9K07_RS31310 () | 64156..67071 | + | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31315 () | 67317..67943 | - | 627 | WP_068683781.1 | lytic transglycosylase domain-containing protein | - |
| F9K07_RS31320 () | 67931..68569 | - | 639 | WP_083944708.1 | S26 family signal peptidase | - |
| F9K07_RS31325 () | 68499..68729 | - | 231 | WP_083944709.1 | helix-turn-helix domain-containing protein | - |
| F9K07_RS31330 () | 68916..69194 | - | 279 | WP_068683784.1 | hypothetical protein | - |
| F9K07_RS31335 () | 69269..69502 | + | 234 | WP_068683789.1 | helix-turn-helix transcriptional regulator | - |
| F9K07_RS31340 () | 69511..70020 | - | 510 | WP_068683790.1 | DUF2285 domain-containing protein | - |
| F9K07_RS31345 () | 70267..71133 | - | 867 | WP_068683792.1 | phytanoyl-CoA dioxygenase family protein | - |
| F9K07_RS31350 () | 71130..71735 | - | 606 | WP_068683794.1 | 4-coumaroyl-homoserine lactone synthase | VF |
| F9K07_RS31355 () | 71809..72594 | - | 786 | WP_083944710.1 | LuxR family transcriptional regulator | - |
| F9K07_RS31360 () | 72751..74460 | - | 1710 | WP_159597442.1 | amidohydrolase | - |
| F9K07_RS31365 () | 74492..75316 | - | 825 | WP_159597443.1 | hypothetical protein | - |
| F9K07_RS31370 () | 75594..77942 | + | 2349 | WP_068685872.1 | indolepyruvate ferredoxin oxidoreductase subunit alpha | - |
| F9K07_RS31375 () | 78019..78831 | + | 813 | Protein_78 | indolepyruvate oxidoreductase subunit beta family protein | - |
| F9K07_RS31380 () | 78979..81894 | + | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| F9K07_RS31385 () | 82011..82247 | - | 237 | WP_159597444.1 | hypothetical protein | - |
| F9K07_RS31390 () | 82261..82812 | - | 552 | WP_159597445.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| F9K07_RS31395 () | 83313..83537 | - | 225 | WP_070697993.1 | hypothetical protein | - |
| F9K07_RS31400 () | 83559..84746 | - | 1188 | WP_159597446.1 | hypothetical protein | - |
| F9K07_RS31405 () | 84968..85687 | - | 720 | WP_159597447.1 | hypothetical protein | - |
| F9K07_RS31410 () | 85798..88392 | - | 2595 | WP_159597448.1 | Protein VirD4 | VF |
| F9K07_RS31415 () | 88614..89684 | - | 1071 | WP_159597449.1 | Type IV secretion system protein VirB11 | VF |
| F9K07_RS31420 () | 89662..90798 | - | 1137 | WP_046532890.1 | Type IV secretion system protein virB10 | VF |
| F9K07_RS31425 () | 90795..91673 | - | 879 | WP_046532891.1 | Type IV secretion system protein virB9 | VF |
| F9K07_RS31430 () | 91670..92401 | - | 732 | WP_159597450.1 | Type IV secretion system protein virB8 | VF |
| F9K07_RS31435 () | 92714..93799 | - | 1086 | WP_159597451.1 | Type IV secretion system protein VirB6 | VF |
| F9K07_RS31440 () | 93811..94119 | - | 309 | WP_070698001.1 | EexN family lipoprotein | - |
| F9K07_RS31445 () | 94233..94952 | - | 720 | WP_159597452.1 | Type IV secretion system protein virB5 | VF |
| F9K07_RS31450 () | 94957..97491 | - | 2535 | WP_159597453.1 | Type IV secretion system protein virB4 | VF |
| F9K07_RS31455 () | 97501..97824 | - | 324 | WP_046534567.1 | Type IV secretion system protein virB3 | VF |
| F9K07_RS31460 () | 97840..98145 | - | 306 | WP_070698005.1 | Type IV secretion system protein virB2 | VF |
| F9K07_RS31465 () | 98311..100668 | - | 2358 | WP_159597454.1 | type I DNA topoisomerase | - |
| F9K07_RS31470 () | 100680..101444 | - | 765 | WP_159597455.1 | Type IV secretion system protein virB1 | VF |
| F9K07_RS31475 () | 101496..101867 | - | 372 | WP_081340480.1 | hypothetical protein | - |
| F9K07_RS31670 () | 102824..103252 | + | 429 | WP_201451630.1 | hypothetical protein | - |
| F9K07_RS31485 () | 103281..103484 | + | 204 | WP_159597456.1 | hypothetical protein | - |
| F9K07_RS31490 () | 103508..103915 | + | 408 | WP_159597457.1 | hypothetical protein | - |
| F9K07_RS31495 () | 103973..104500 | + | 528 | WP_159597458.1 | hypothetical protein | - |
| F9K07_RS31500 () | 104676..104900 | + | 225 | WP_046532841.1 | hypothetical protein | - |
| F9K07_RS31505 () | 104911..105114 | + | 204 | WP_046532840.1 | hypothetical protein | - |
| F9K07_RS31510 () | 105114..105467 | + | 354 | Protein_105 | hypothetical protein | - |
| F9K07_RS31515 () | 105539..105676 | + | 138 | WP_158014636.1 | hypothetical protein | - |
| F9K07_RS31520 () | 105695..105961 | + | 267 | WP_070697965.1 | hypothetical protein | - |
| F9K07_RS31525 () | 105987..106247 | + | 261 | WP_070697966.1 | hypothetical protein | - |
| F9K07_RS31530 () | 106265..106480 | + | 216 | WP_046532838.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|