MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 115450 bp
Accession: NZ_CP044434 Location: 1525905..1641354 Organism: Alicyclobacillus sp. TC Replicon: chromosome
Accession: NZ_CP044434 Location: 1525905..1641354 Organism: Alicyclobacillus sp. TC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FY534_RS07495 () | 1520915..1523308 | + | 2394 | WP_203114155.1 | DUF87 domain-containing protein | - |
| FY534_RS07500 () | 1523362..1523634 | + | 273 | WP_203114156.1 | hypothetical protein | - |
| FY534_RS07505 () | 1523654..1524103 | - | 450 | WP_203114157.1 | hypothetical protein | - |
| FY534_RS07510 () | 1524103..1524573 | - | 471 | WP_203114158.1 | hypothetical protein | - |
| FY534_RS07515 () | 1526106..1526513 | - | 408 | WP_203114159.1 | gamma-glutamylcyclotransferase | - |
| FY534_RS07520 () | 1526564..1527034 | - | 471 | WP_203114160.1 | prepilin peptidase | - |
| FY534_RS07525 () | 1527559..1528275 | - | 717 | WP_203114161.1 | replication-relaxation family protein | - |
| FY534_RS07530 () | 1528602..1528913 | + | 312 | WP_203114162.1 | hypothetical protein | - |
| FY534_RS07535 () | 1528944..1529972 | - | 1029 | WP_203114163.1 | GGDEF domain-containing protein | - |
| FY534_RS07540 () | 1530227..1530775 | - | 549 | WP_203114164.1 | hypothetical protein | - |
| FY534_RS07545 () | 1530838..1531092 | - | 255 | WP_203114165.1 | hypothetical protein | - |
| FY534_RS07550 () | 1531106..1531747 | - | 642 | WP_203114166.1 | metal-dependent hydrolase | - |
| FY534_RS07555 () | 1531807..1532232 | - | 426 | WP_203114167.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FY534_RS07560 () | 1532229..1532480 | - | 252 | WP_203114168.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FY534_RS07565 () | 1532555..1532935 | - | 381 | WP_203114169.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FY534_RS07570 () | 1533028..1533450 | - | 423 | WP_203114170.1 | hypothetical protein | - |
| FY534_RS07575 () | 1533699..1534817 | - | 1119 | WP_203114171.1 | hypothetical protein | - |
| FY534_RS07580 () | 1534795..1535433 | - | 639 | WP_203114172.1 | hypothetical protein | - |
| FY534_RS07585 () | 1535696..1536214 | - | 519 | WP_203114173.1 | hypothetical protein | - |
| FY534_RS07590 () | 1536219..1537370 | - | 1152 | WP_203114174.1 | XRE family transcriptional regulator | - |
| FY534_RS07595 () | 1537520..1537921 | - | 402 | WP_203114175.1 | hypothetical protein | - |
| FY534_RS07600 () | 1537912..1539876 | - | 1965 | WP_203114176.1 | hypothetical protein | - |
| FY534_RS07605 () | 1539941..1540933 | - | 993 | WP_203114177.1 | hypothetical protein | - |
| FY534_RS07610 () | 1541107..1541415 | + | 309 | WP_203114178.1 | IS110 family transposase ISMtsp6 | Transposase |
| FY534_RS07615 () | 1541544..1541840 | - | 297 | WP_203114179.1 | integrase core domain-containing protein | - |
| FY534_RS07620 () | 1541898..1542272 | - | 375 | WP_203114180.1 | IS3 family transposase ISHahy4 | Transposase |
| FY534_RS07625 () | 1542597..1543872 | + | 1276 | Protein_1490 | IS110 family transposase IS650 | Transposase |
| FY534_RS07630 () | 1544253..1544552 | - | 300 | WP_203115566.1 | transposase | - |
| FY534_RS07635 () | 1544950..1545678 | - | 729 | WP_203114181.1 | ABC transporter permease subunit | - |
| FY534_RS07640 () | 1545681..1546382 | - | 702 | WP_203114182.1 | ABC transporter ATP-binding protein NatA | VF |
| FY534_RS07645 () | 1547208..1548644 | - | 1437 | WP_203114183.1 | HesA/MoeB/ThiF family protein | - |
| FY534_RS07650 () | 1548637..1549767 | - | 1131 | WP_203114184.1 | M50 family metallopeptidase | - |
| FY534_RS07655 () | 1550288..1551490 | + | 1203 | WP_203114185.1 | IS1182 family transposase ISDre5 | Transposase |
| FY534_RS07660 () | 1552032..1552268 | - | 237 | WP_203114186.1 | hypothetical protein | - |
| FY534_RS07665 () | 1553225..1554349 | - | 1125 | WP_203114187.1 | transglycosylase SLT domain-containing protein | - |
| FY534_RS07670 () | 1554458..1554811 | - | 354 | WP_203114188.1 | hypothetical protein | - |
| FY534_RS07675 () | 1555076..1555534 | + | 459 | WP_203114189.1 | restriction endonuclease | - |
| FY534_RS07680 () | 1555688..1557175 | + | 1488 | WP_203114190.1 | spore germination protein | - |
| FY534_RS07685 () | 1557184..1558380 | + | 1197 | WP_203115567.1 | hypothetical protein | - |
| FY534_RS07690 () | 1558397..1558642 | + | 246 | WP_203114191.1 | hypothetical protein | - |
| FY534_RS07695 () | 1558645..1559727 | + | 1083 | WP_203114192.1 | GerAB/ArcD/ProY family transporter | - |
| FY534_RS07700 () | 1560044..1560199 | + | 156 | WP_203114193.1 | hypothetical protein | - |
| FY534_RS07705 () | 1560237..1560518 | + | 282 | WP_203114194.1 | hypothetical protein | - |
| FY534_RS07710 () | 1560955..1561389 | - | 435 | WP_203115568.1 | poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD | - |
| FY534_RS07715 () | 1561386..1562635 | - | 1250 | Protein_1508 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| FY534_RS07720 () | 1563768..1564505 | - | 738 | WP_203114195.1 | ABC transporter permease | - |
| FY534_RS07725 () | 1564539..1565300 | - | 762 | WP_203114196.1 | ATP-binding cassette domain-containing protein | - |
| FY534_RS07730 () | 1565313..1566182 | - | 870 | WP_203114197.1 | pentapeptide repeat-containing protein | - |
| FY534_RS07735 () | 1566197..1566526 | - | 330 | WP_203114198.1 | PadR family transcriptional regulator | - |
| FY534_RS07740 () | 1567054..1567572 | + | 519 | WP_203114199.1 | hypothetical protein | - |
| FY534_RS07745 () | 1567577..1568194 | + | 618 | WP_203114200.1 | TetR/AcrR family transcriptional regulator | - |
| FY534_RS07750 () | 1569391..1570233 | - | 843 | WP_203114201.1 | NAD(P)-dependent oxidoreductase | - |
| FY534_RS07755 () | 1570356..1571201 | + | 846 | WP_203114202.1 | helix-turn-helix transcriptional regulator | - |
| FY534_RS07760 () | 1571646..1571897 | + | 252 | WP_203115569.1 | DUF3888 domain-containing protein | - |
| FY534_RS07765 () | 1572183..1572560 | + | 378 | WP_203114203.1 | MerR family transcriptional regulator | - |
| FY534_RS07770 () | 1572562..1573305 | + | 744 | WP_203114204.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| FY534_RS07775 () | 1574049..1574501 | - | 453 | WP_203114205.1 | hypothetical protein | - |
| FY534_RS07780 () | 1575127..1575999 | + | 873 | Protein_1521 | DMT family transporter | - |
| FY534_RS07785 () | 1576903..1577259 | - | 357 | WP_203114206.1 | hypothetical protein | - |
| FY534_RS07790 () | 1577628..1578041 | + | 414 | WP_203114207.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| FY534_RS07795 () | 1578272..1579000 | + | 729 | WP_203114208.1 | M48 family metallopeptidase | - |
| FY534_RS07800 () | 1579004..1579336 | - | 333 | WP_203114209.1 | hypothetical protein | - |
| FY534_RS07805 () | 1579379..1582315 | - | 2937 | WP_203114210.1 | type I restriction endonuclease subunit R | - |
| FY534_RS07810 () | 1582312..1583571 | - | 1260 | WP_203114211.1 | restriction endonuclease subunit S | - |
| FY534_RS07815 () | 1583561..1585042 | - | 1482 | WP_203114212.1 | type I restriction-modification system subunit M | - |
| FY534_RS07820 () | 1585307..1588156 | - | 2850 | WP_203114213.1 | hypothetical protein | - |
| FY534_RS07825 () | 1588471..1588701 | - | 231 | WP_203114214.1 | hypothetical protein | - |
| FY534_RS07830 () | 1588791..1589699 | - | 909 | WP_203114215.1 | hypothetical protein | - |
| FY534_RS07835 () | 1589729..1590328 | - | 600 | WP_203114216.1 | hypothetical protein | - |
| FY534_RS07840 () | 1590433..1591029 | - | 597 | WP_203114217.1 | hypothetical protein | - |
| FY534_RS07845 () | 1591477..1592607 | - | 1131 | WP_203114218.1 | ISNCY family transposase ISKol11 | Transposase |
| FY534_RS07850 () | 1592797..1594368 | + | 1572 | WP_203114219.1 | hypothetical protein | - |
| FY534_RS07855 () | 1595361..1595669 | - | 309 | WP_203114220.1 | hypothetical protein | - |
| FY534_RS07860 () | 1596004..1597032 | - | 1029 | WP_203114221.1 | ATP-binding protein | - |
| FY534_RS07865 () | 1597447..1597668 | - | 222 | WP_203114222.1 | IS3 family transposase | - |
| FY534_RS07870 () | 1597673..1598890 | + | 1218 | Protein_1539 | IS256 family transposase ISCob1 | Transposase |
| FY534_RS07875 () | 1599193..1599795 | - | 603 | WP_203114223.1 | hypothetical protein | - |
| FY534_RS07880 () | 1599867..1600076 | - | 210 | WP_203114224.1 | hypothetical protein | - |
| FY534_RS07885 () | 1600120..1601256 | - | 1137 | WP_203114225.1 | hypothetical protein | - |
| FY534_RS07890 () | 1601257..1601571 | - | 315 | WP_203114226.1 | hypothetical protein | - |
| FY534_RS07895 () | 1602324..1603502 | + | 1179 | WP_203114227.1 | PAS domain S-box protein | - |
| FY534_RS07900 () | 1603522..1604208 | - | 687 | WP_072875359.1 | Response regulator protein VraR | VF |
| FY534_RS07905 () | 1604552..1606276 | - | 1725 | WP_203114228.1 | putative signaling protein | VF |
| FY534_RS07910 () | 1606904..1607140 | + | 237 | WP_203114229.1 | IS3 family transposase | - |
| FY534_RS07915 () | 1608113..1608760 | + | 648 | WP_203114230.1 | hypothetical protein | - |
| FY534_RS07920 () | 1609239..1610453 | - | 1215 | WP_203114231.1 | glycosyltransferase family 2 protein | - |
| FY534_RS07925 () | 1610466..1610948 | - | 483 | WP_203114232.1 | hypothetical protein | - |
| FY534_RS07930 () | 1611022..1611234 | + | 213 | WP_203114233.1 | hypothetical protein | - |
| FY534_RS07935 () | 1611750..1612016 | + | 267 | WP_203114234.1 | hypothetical protein | - |
| FY534_RS07940 () | 1612029..1612316 | + | 288 | WP_203114235.1 | hypothetical protein | - |
| FY534_RS07945 () | 1612448..1613149 | - | 702 | WP_203114236.1 | hypothetical protein | - |
| FY534_RS07950 () | 1613309..1613404 | - | 96 | Protein_1555 | transposase | - |
| FY534_RS07955 () | 1613477..1614358 | - | 882 | WP_203114237.1 | IS3 family transposase ISHahy4 | Transposase |
| FY534_RS07960 () | 1614527..1615804 | + | 1278 | WP_203114238.1 | IS110 family transposase IS650 | Transposase |
| FY534_RS07965 () | 1616189..1616524 | - | 336 | WP_072874689.1 | IS3 family transposase ISHahy4 | Transposase |
| FY534_RS07970 () | 1616561..1617139 | - | 579 | WP_203114239.1 | hypothetical protein | - |
| FY534_RS07975 () | 1617189..1617590 | - | 402 | WP_203114240.1 | YolD-like family protein | - |
| FY534_RS07980 () | 1617587..1618849 | - | 1263 | WP_203114241.1 | DNA polymerase IV | - |
| FY534_RS07985 () | 1618846..1619103 | - | 258 | WP_203114242.1 | hypothetical protein | - |
| FY534_RS07990 () | 1619257..1620390 | + | 1134 | WP_203114243.1 | hypothetical protein | - |
| FY534_RS07995 () | 1620627..1620800 | + | 174 | WP_203114244.1 | hypothetical protein | - |
| FY534_RS08000 () | 1620868..1622574 | - | 1707 | WP_203114245.1 | hypothetical protein | - |
| FY534_RS08005 () | 1623660..1624460 | - | 801 | WP_203114246.1 | hypothetical protein | - |
| FY534_RS08010 () | 1624462..1625778 | - | 1317 | WP_203114247.1 | hypothetical protein | - |
| FY534_RS08015 () | 1626216..1626599 | + | 384 | WP_203114248.1 | Tyrosine recombinase XerC | VF |
| FY534_RS08020 () | 1626963..1627205 | + | 243 | WP_203114249.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| FY534_RS08025 () | 1627259..1627621 | - | 363 | WP_203114250.1 | hypothetical protein | - |
| FY534_RS08030 () | 1627669..1628253 | - | 585 | WP_203114251.1 | hypothetical protein | - |
| FY534_RS08035 () | 1629056..1629478 | - | 423 | WP_203114252.1 | hypothetical protein | - |
| FY534_RS08040 () | 1629586..1632075 | - | 2490 | WP_203115570.1 | ATP-binding protein | - |
| FY534_RS08045 () | 1632116..1632796 | - | 681 | WP_203114253.1 | hypothetical protein | VF |
| FY534_RS08050 () | 1632968..1634086 | + | 1119 | WP_203114254.1 | site-specific DNA-methyltransferase | - |
| FY534_RS08055 () | 1634114..1634644 | - | 531 | WP_203114255.1 | hypothetical protein | - |
| FY534_RS08060 () | 1634665..1635789 | - | 1125 | WP_203114256.1 | hypothetical protein | - |
| FY534_RS08065 () | 1635851..1636150 | - | 300 | WP_203114257.1 | VRR-NUC domain-containing protein | - |
| FY534_RS08070 () | 1636275..1636910 | - | 636 | WP_203114258.1 | RNA polymerase sigma factor RpoS | VF |
| FY534_RS08075 () | 1636960..1637259 | - | 300 | WP_203114259.1 | hypothetical protein | - |
| FY534_RS08080 () | 1637243..1637461 | - | 219 | WP_203114260.1 | hypothetical protein | - |
| FY534_RS08085 () | 1637458..1638306 | - | 849 | WP_203114261.1 | hypothetical protein | - |
| FY534_RS08090 () | 1638297..1638896 | - | 600 | WP_203114262.1 | hypothetical protein | - |
| FY534_RS08095 () | 1638912..1639319 | - | 408 | WP_203114263.1 | DUF4406 domain-containing protein | - |
| FY534_RS08100 () | 1639379..1640008 | - | 630 | WP_203114264.1 | hypothetical protein | - |
| FY534_RS08105 () | 1641383..1644802 | - | 3420 | WP_203114265.1 | DUF927 domain-containing protein | - |
| FY534_RS08110 () | 1644824..1645006 | - | 183 | WP_203114266.1 | hypothetical protein | - |
| FY534_RS08115 () | 1644970..1645578 | - | 609 | WP_203114267.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|