MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52485 bp
Accession: NZ_CP044403 Location: 3951026..4003510 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Accession: NZ_CP044403 Location: 3951026..4003510 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7O57_RS19390 () | 3947430..3947858 | - | 429 | WP_001287454.1 | DedA family protein | - |
| F7O57_RS19395 () | 3947855..3948421 | - | 567 | WP_001521122.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| F7O57_RS19425 () | 3949713..3949898 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| F7O57_RS19430 () | 3950133..3952763 | - | 2631 | WP_000047170.1 | alanine--tRNA ligase | - |
| F7O57_RS19435 () | 3952892..3953392 | - | 501 | WP_000140506.1 | recombination regulator RecX | - |
| F7O57_RS19440 () | 3953461..3954522 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| F7O57_RS19445 () | 3954602..3955099 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| F7O57_RS19450 () | 3955244..3956329 | - | 1086 | WP_020234022.1 | lytic murein transglycosylase B | - |
| F7O57_RS19455 () | 3956585..3957148 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| F7O57_RS19460 () | 3957145..3958104 | + | 960 | WP_001521126.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| F7O57_RS19465 () | 3958115..3958486 | + | 372 | WP_000216201.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| F7O57_RS19470 () | 3958490..3959269 | + | 780 | WP_001077342.1 | sorbitol-6-phosphate dehydrogenase | - |
| F7O57_RS19475 () | 3959375..3959734 | + | 360 | WP_001521127.1 | transcriptional regulator GutM | - |
| F7O57_RS19480 () | 3959801..3960574 | + | 774 | WP_000804552.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| F7O57_RS19485 () | 3960567..3961532 | + | 966 | WP_001287415.1 | Arabinose 5-phosphate isomerase GutQ | VF |
| F7O57_RS19490 () | 3961529..3963043 | - | 1515 | WP_001521129.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| F7O57_RS19495 () | 3963230..3964669 | + | 1440 | WP_000029623.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| F7O57_RS19500 () | 3964666..3965799 | + | 1134 | WP_001521130.1 | NADH:flavorubredoxin reductase NorW | - |
| F7O57_RS19505 () | 3965877..3968117 | - | 2241 | WP_001521131.1 | carbamoyltransferase HypF | - |
| F7O57_RS19510 () | 3968270..3968797 | - | 528 | WP_001078777.1 | electron transport protein HydN | - |
| F7O57_RS19515 () | 3968946..3969956 | - | 1011 | WP_015912547.1 | DNA-binding transcriptional regulator AscG | - |
| F7O57_RS19520 () | 3970216..3971673 | + | 1458 | WP_020234027.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| F7O57_RS19525 () | 3971682..3973106 | + | 1425 | WP_020234028.1 | 6-phospho-beta-glucosidase AscB | - |
| F7O57_RS19530 () | 3973185..3973604 | - | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| F7O57_RS19535 () | 3973601..3973912 | - | 312 | WP_001521139.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| F7O57_RS19540 () | 3974079..3974549 | - | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| F7O57_RS19545 () | 3974542..3974952 | - | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| F7O57_RS19550 () | 3974949..3975716 | - | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| F7O57_RS19555 () | 3975716..3976258 | - | 543 | WP_000493785.1 | formate hydrogenlyase subunit HycF | - |
| F7O57_RS19560 () | 3976268..3977977 | - | 1710 | WP_001521140.1 | formate hydrogenlyase subunit HycE | - |
| F7O57_RS19565 () | 3977995..3978918 | - | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| F7O57_RS19570 () | 3978921..3980747 | - | 1827 | WP_001521141.1 | formate hydrogenlyase subunit 3 | - |
| F7O57_RS19575 () | 3980744..3981355 | - | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| F7O57_RS19580 () | 3981480..3981941 | - | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| F7O57_RS19585 () | 3982153..3982503 | + | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| F7O57_RS19590 () | 3982507..3983379 | + | 873 | WP_000337682.1 | hydrogenase nickel incorporation protein HypB | - |
| F7O57_RS19595 () | 3983370..3983642 | + | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| F7O57_RS19600 () | 3983642..3984763 | + | 1122 | WP_001212997.1 | hydrogenase formation protein HypD | - |
| F7O57_RS19605 () | 3984760..3985770 | + | 1011 | WP_001521142.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| F7O57_RS19610 () | 3985844..3987922 | + | 2079 | WP_021523231.1 | Formate hydrogenlyase transcriptional activator FhlA | VF |
| F7O57_RS19615 () | 3987967..3988395 | + | 429 | WP_001521144.1 | TOBE domain-containing protein | - |
| F7O57_RS19620 () | 3988434..3988778 | - | 345 | WP_000015479.1 | nitrous oxide-stimulated promoter family protein | - |
| F7O57_RS19625 () | 3988855..3988989 | - | 135 | WP_000611937.1 | hypothetical protein | - |
| F7O57_RS19630 () | 3989650..3990804 | + | 1155 | WP_029701610.1 | hypothetical protein | - |
| F7O57_RS19635 () | 3990797..3992671 | + | 1875 | WP_029701609.1 | ThiF family adenylyltransferase | - |
| F7O57_RS19640 () | 3992664..3993152 | + | 489 | WP_029701608.1 | Mov34/MPN/PAD-1 family protein | - |
| F7O57_RS19645 () | 3993180..3994085 | + | 906 | WP_029701605.1 | hypothetical protein | - |
| F7O57_RS19650 () | 3994174..3994803 | - | 630 | WP_001513936.1 | hypothetical protein | - |
| F7O57_RS19655 () | 3995030..3995392 | - | 363 | WP_029701603.1 | hypothetical protein | - |
| F7O57_RS19660 () | 3995548..3995973 | + | 426 | WP_029701602.1 | hypothetical protein | - |
| F7O57_RS19665 () | 3995951..3997177 | + | 1227 | WP_029701600.1 | relaxase/mobilization nuclease domain-containing protein | - |
| F7O57_RS19670 () | 3997491..3998135 | + | 645 | WP_029701599.1 | hypothetical protein | - |
| F7O57_RS19675 () | 3998324..3998737 | - | 414 | WP_001513941.1 | hypothetical protein | - |
| F7O57_RS19680 () | 3998895..3999149 | - | 255 | WP_001513942.1 | hypothetical protein | - |
| F7O57_RS19685 () | 3999146..3999999 | - | 854 | Protein_3771 | replication initiation protein | - |
| F7O57_RS19690 () | 4000443..4001033 | - | 591 | WP_029701595.1 | hypothetical protein | - |
| F7O57_RS19695 () | 4001030..4002493 | - | 1464 | WP_029701594.1 | hypothetical protein ; Integrase | Integrase |
| F7O57_RS19700 () | 4002653..4005220 | + | 2568 | WP_108433725.1 | DNA mismatch repair protein MutS | - |
| F7O57_RS19705 () | 4005326..4005982 | + | 657 | WP_001141345.1 | protein-serine/threonine phosphatase | - |
| F7O57_RS19710 () | 4006033..4006800 | - | 768 | WP_001295181.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| F7O57_RS19715 () | 4006996..4007904 | + | 909 | WP_000847993.1 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|