MGE detailed information
MGE type: Prophage MGE length: 51351 bp
Accession: NZ_CP044403 Location: 2614384..2665734 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Accession: NZ_CP044403 Location: 2614384..2665734 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7O57_RS12795 () | 2609700..2610527 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| F7O57_RS12800 () | 2610524..2611381 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| F7O57_RS12805 () | 2611378..2612235 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| F7O57_RS12810 () | 2612708..2613502 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| F7O57_RS12815 () | 2613627..2613778 | + | 152 | Protein_2428 | DinI-like family protein | - |
| F7O57_RS12820 () | 2614048..2614341 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| F7O57_RS12825 () | 2614384..2615424 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| F7O57_RS12830 () | 2615434..2615715 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| F7O57_RS12835 () | 2615715..2618090 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| F7O57_RS12840 () | 2618155..2618754 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| F7O57_RS12845 () | 2618822..2622301 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| F7O57_RS12850 () | 2622362..2622964 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| F7O57_RS12855 () | 2622901..2623644 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| F7O57_RS12860 () | 2623650..2624348 | - | 699 | WP_029702161.1 | phage minor tail protein L | - |
| F7O57_RS12865 () | 2624348..2624677 | - | 330 | WP_000847345.1 | phage tail protein | - |
| F7O57_RS12870 () | 2624674..2627235 | - | 2562 | WP_048219008.1 | phage tail tape measure protein | - |
| F7O57_RS12875 () | 2627228..2627662 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| F7O57_RS12880 () | 2627644..2628066 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| F7O57_RS12885 () | 2628082..2628822 | - | 741 | WP_001349920.1 | phage tail protein | - |
| F7O57_RS12890 () | 2628830..2629225 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| F7O57_RS12895 () | 2629222..2629800 | - | 579 | WP_000975070.1 | phage tail protein | - |
| F7O57_RS12900 () | 2629812..2630165 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| F7O57_RS12905 () | 2630177..2630575 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| F7O57_RS12910 () | 2630617..2631642 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| F7O57_RS12915 () | 2631697..2632029 | - | 333 | WP_001708751.1 | head decoration protein | - |
| F7O57_RS12920 () | 2632039..2633358 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| F7O57_RS12925 () | 2633339..2634940 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| F7O57_RS12930 () | 2634937..2635143 | - | 207 | WP_000198149.1 | gpW family protein | - |
| F7O57_RS12935 () | 2635140..2637065 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| F7O57_RS12940 () | 2637040..2637585 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| F7O57_RS12945 () | 2637974..2638207 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| F7O57_RS12950 () | 2638265..2638675 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| F7O57_RS12955 () | 2638826..2638998 | - | 173 | Protein_2456 | addiction module toxin, GnsA/GnsB family | - |
| F7O57_RS12960 () | 2639170..2639325 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| F7O57_RS12965 () | 2639405..2639470 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| F7O57_RS12970 () | 2639473..2639661 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| F7O57_RS12975 () | 2639672..2639884 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| F7O57_RS12980 () | 2640247..2640744 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| F7O57_RS12985 () | 2640741..2641274 | - | 534 | WP_001092971.1 | lysozyme | - |
| F7O57_RS12990 () | 2641271..2641582 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| F7O57_RS12995 () | 2641587..2641802 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| F7O57_RS13000 () | 2642359..2642817 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| F7O57_RS13005 () | 2643268..2643483 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| F7O57_RS13010 () | 2643784..2643996 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| F7O57_RS13015 () | 2644051..2644140 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| F7O57_RS13020 () | 2644418..2645170 | - | 753 | WP_001047135.1 | antitermination protein | - |
| F7O57_RS13025 () | 2645184..2646233 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| F7O57_RS13030 () | 2646235..2646513 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| F7O57_RS13035 () | 2646580..2646831 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| F7O57_RS13040 () | 2647048..2647203 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| F7O57_RS13045 () | 2647275..2647562 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| F7O57_RS13050 () | 2647562..2647801 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| F7O57_RS13055 () | 2647826..2648131 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| F7O57_RS13060 () | 2648334..2648666 | + | 333 | WP_001301033.1 | protein FlxA | - |
| F7O57_RS13065 () | 2649103..2650416 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| F7O57_RS13070 () | 2650900..2651922 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| F7O57_RS13075 () | 2652745..2653410 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| F7O57_RS13080 () | 2653613..2654011 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| F7O57_RS13085 () | 2654052..2655017 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| F7O57_RS13090 () | 2654998..2655519 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| F7O57_RS13095 () | 2655503..2655730 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| F7O57_RS13100 () | 2655811..2656218 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| F7O57_RS13105 () | 2656387..2656542 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| F7O57_RS13110 () | 2656544..2657119 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| F7O57_RS13115 () | 2657606..2657794 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| F7O57_RS13120 () | 2657791..2657982 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| F7O57_RS13125 () | 2658076..2660547 | + | 2472 | WP_000048363.1 | exonuclease | - |
| F7O57_RS13130 () | 2660620..2660871 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| F7O57_RS13135 () | 2660942..2661619 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| F7O57_RS13140 () | 2661619..2661966 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| F7O57_RS13145 () | 2661986..2663557 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| F7O57_RS13150 () | 2663598..2663717 | + | 120 | Protein_2495 | DUF3596 domain-containing protein | - |
| F7O57_RS13155 () | 2663827..2664285 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| F7O57_RS13160 () | 2664429..2665604 | + | 1176 | Protein_2497 | Putative defective protein IntQ ; Integrase | Integrase |
| F7O57_RS13165 () | 2665606..2665734 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| F7O57_RS13170 () | 2665792..2666811 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| F7O57_RS13175 () | 2666823..2668037 | - | 1215 | WP_001721413.1 | starvation-sensing protein RspA | - |
| F7O57_RS13180 () | 2668243..2668569 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| F7O57_RS13185 () | 2668704..2669045 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| F7O57_RS13190 () | 2669080..2669640 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| F7O57_RS13195 () | 2669643..2670353 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|