MGE detailed information
MGE type: Prophage MGE length: 55243 bp
Accession: NZ_CP044403 Location: 2355805..2411047 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Accession: NZ_CP044403 Location: 2355805..2411047 Organism: Escherichia coli strain NMBU-W10C18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7O57_RS11575 () | 2351086..2352114 | + | 1029 | WP_001523164.1 | HlyD family secretion protein | - |
| F7O57_RS11580 () | 2352111..2353625 | + | 1515 | WP_020233354.1 | DHA2 family efflux MFS transporter permease subunit | - |
| F7O57_RS11585 () | 2353820..2354383 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| F7O57_RS11590 () | 2354404..2355336 | - | 933 | WP_020233353.1 | sensor domain-containing diguanylate cyclase | - |
| F7O57_RS11595 () | 2355401..2356098 | + | 698 | Protein_2184 | IS1 family transposase | - |
| F7O57_RS11600 () | 2356114..2356413 | - | 300 | Protein_2185 | sensor domain-containing diguanylate cyclase | - |
| F7O57_RS11605 () | 2356668..2357651 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| F7O57_RS11610 () | 2358129..2359502 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| F7O57_RS11615 () | 2359631..2360566 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| F7O57_RS11620 () | 2360618..2361853 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| F7O57_RS11625 () | 2361855..2362070 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| F7O57_RS11630 () | 2362170..2362358 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2362174..2362352 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2362174..2362352 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2362174..2362352 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2362174..2362352 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| F7O57_RS11635 () | 2362396..2362545 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| F7O57_RS11640 () | 2362601..2363410 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| F7O57_RS11645 () | 2363403..2366003 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| F7O57_RS11650 () | 2366105..2366380 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| F7O57_RS11655 () | 2366455..2366625 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| F7O57_RS11660 () | 2366625..2366846 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| F7O57_RS11665 () | 2367288..2367776 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| F7O57_RS11670 () | 2367773..2367928 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| F7O57_RS11675 () | 2367939..2368118 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| F7O57_RS11680 () | 2368361..2368780 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| F7O57_RS11685 () | 2368860..2369114 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| F7O57_RS11690 () | 2369111..2369533 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| F7O57_RS11695 () | 2369611..2370399 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| F7O57_RS11700 () | 2370406..2371152 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| F7O57_RS11705 () | 2371175..2371936 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| F7O57_RS11710 () | 2371952..2372374 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| F7O57_RS11715 () | 2372536..2373039 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| F7O57_RS11720 () | 2373160..2373933 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| F7O57_RS11725 () | 2374456..2374581 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| F7O57_RS11730 () | 2374664..2375005 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| F7O57_RS11735 () | 2375873..2376472 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| F7O57_RS11740 () | 2376472..2376762 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| F7O57_RS11745 () | 2376759..2377301 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| F7O57_RS11750 () | 2377523..2378092 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| F7O57_RS11755 () | 2378061..2378363 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| F7O57_RS11760 () | 2378440..2378781 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| F7O57_RS11765 () | 2378785..2379261 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| F7O57_RS11770 () | 2379478..2379663 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| F7O57_RS11775 () | 2379860..2381317 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| F7O57_RS11780 () | 2381455..2382246 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| F7O57_RS11785 () | 2382239..2383171 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| F7O57_RS11790 () | 2383107..2383358 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| F7O57_RS11795 () | 2383362..2384456 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| F7O57_RS11800 () | 2384437..2385738 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| F7O57_RS11805 () | 2385741..2387147 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| F7O57_RS11810 () | 2387131..2388243 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| F7O57_RS11815 () | 2388348..2389112 | + | 765 | WP_029702112.1 | hypothetical protein | - |
| F7O57_RS11820 () | 2389211..2390350 | + | 1140 | WP_020233804.1 | hypothetical protein | - |
| F7O57_RS11825 () | 2390393..2390569 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| F7O57_RS11830 () | 2390573..2390968 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| F7O57_RS11835 () | 2390968..2391351 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| F7O57_RS11840 () | 2391352..2391732 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| F7O57_RS11845 () | 2391729..2392121 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| F7O57_RS11850 () | 2392148..2393110 | + | 963 | WP_001328756.1 | hypothetical protein | - |
| F7O57_RS11855 () | 2393261..2393620 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| F7O57_RS11860 () | 2393728..2393928 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| F7O57_RS11865 () | 2394092..2397325 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| F7O57_RS11870 () | 2397318..2397656 | + | 339 | WP_000024051.1 | phage tail protein | - |
| F7O57_RS11875 () | 2397656..2398354 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| F7O57_RS11880 () | 2398360..2399103 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| F7O57_RS11885 () | 2399040..2399642 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| F7O57_RS11890 () | 2399703..2403182 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| F7O57_RS11895 () | 2403250..2403849 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| F7O57_RS11900 () | 2403914..2406313 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| F7O57_RS11905 () | 2406310..2406591 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| F7O57_RS11910 () | 2406601..2407305 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| F7O57_RS11915 () | 2407316..2407609 | + | 294 | WP_001405873.1 | hypothetical protein | - |
| F7O57_RS11920 () | 2407629..2407739 | + | 111 | Protein_2249 | tail fiber assembly protein | - |
| F7O57_RS11925 () | 2407837..2408428 | - | 592 | Protein_2250 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| F7O57_RS11930 () | 2408745..2408978 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| F7O57_RS11935 () | 2409047..2409160 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| F7O57_RS11940 () | 2409764..2411047 | + | 1284 | WP_029701979.1 | MHS family MFS transporter | - |
| F7O57_RS11945 () | 2411136..2412596 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| F7O57_RS11950 () | 2412632..2412835 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| F7O57_RS11955 () | 2413013..2413699 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| F7O57_RS11960 () | 2413788..2414534 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|