MGE detailed information
MGE type: Conjugative plasmid MGE length: 41753 bp
Accession: NZ_CP044353 Location: 1..41753 Organism: Xylella fastidiosa strain ATCC 35879 Replicon: plasmid pXF879-41
Accession: NZ_CP044353 Location: 1..41753 Organism: Xylella fastidiosa strain ATCC 35879 Replicon: plasmid pXF879-41
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7G16_RS11675 () | 396..1794 | - | 1399 | Protein_1 | P-type conjugative transfer protein TrbL | - |
| F7G16_RS11680 () | 1800..2114 | - | 315 | WP_152534368.1 | EexN family lipoprotein | - |
| F7G16_RS11685 () | 2127..2912 | - | 786 | WP_004091516.1 | P-type conjugative transfer protein TrbJ | - |
| F7G16_RS11690 () | 2931..4331 | - | 1401 | WP_004091515.1 | TrbI/VirB10 family protein | - |
| F7G16_RS11695 () | 4337..4813 | - | 477 | WP_050812601.1 | conjugal transfer protein TrbH | - |
| F7G16_RS11700 () | 4816..5706 | - | 891 | WP_038229217.1 | P-type conjugative transfer protein TrbG | - |
| F7G16_RS11705 () | 5723..6439 | - | 717 | WP_004091508.1 | conjugal transfer protein TrbF | - |
| F7G16_RS11710 () | 6436..9000 | - | 2565 | WP_072866396.1 | conjugal transfer protein TrbE | - |
| F7G16_RS11715 () | 8988..9308 | - | 321 | WP_004091502.1 | conjugal transfer protein TrbD | - |
| F7G16_RS11720 () | 9311..9703 | - | 393 | WP_004091500.1 | TrbC/VirB2 family protein | - |
| F7G16_RS11725 () | 9716..10675 | - | 960 | WP_038232472.1 | Putative conjugal transfer protein | VF |
| F7G16_RS11730 () | 10873..11229 | - | 357 | WP_038232465.1 | transcriptional regulator | - |
| F7G16_RS11735 () | 11347..11706 | + | 360 | WP_004091494.1 | single-stranded DNA-binding protein | - |
| F7G16_RS11740 () | 11750..12097 | + | 348 | WP_050812600.1 | hypothetical protein | - |
| F7G16_RS11745 () | 12141..13052 | + | 912 | WP_004091489.1 | replication protein | - |
| F7G16_RS11750 () | 13771..14091 | + | 321 | WP_004091487.1 | hypothetical protein | - |
| F7G16_RS11755 () | 14287..14586 | + | 300 | WP_038232470.1 | transcriptional regulator KorA | - |
| F7G16_RS11760 () | 14589..15353 | + | 765 | WP_004091486.1 | ParA family protein | - |
| F7G16_RS11765 () | 15362..16381 | + | 1020 | WP_178086808.1 | ParB/RepB/Spo0J family partition protein | - |
| F7G16_RS11770 () | 16479..16832 | + | 354 | WP_004091455.1 | hypothetical protein | - |
| F7G16_RS11775 () | 16859..17455 | + | 597 | WP_004091453.1 | hypothetical protein | - |
| F7G16_RS11780 () | 17559..18773 | - | 1215 | WP_004091452.1 | IS200-IS605 family transposase IS609 | Transposase |
| F7G16_RS11785 () | 18796..19209 | + | 414 | WP_081370385.1 | IS200/IS605 family transposase | - |
| F7G16_RS11790 () | 19282..19734 | - | 453 | WP_004091442.1 | conjugal transfer protein TraM | - |
| F7G16_RS11795 () | 19734..20459 | - | 726 | WP_004091441.1 | conjugal transfer protein TraL | - |
| F7G16_RS11800 () | 20459..20848 | - | 390 | WP_004091439.1 | TraK family protein | - |
| F7G16_RS11805 () | 21062..21415 | + | 354 | WP_004091438.1 | conjugal transfer transcriptional regulator TraJ | - |
| F7G16_RS11810 () | 21450..23942 | + | 2493 | WP_004091435.1 | Protein TraI | Relaxase |
| F7G16_RS11815 () | 23939..25873 | + | 1935 | WP_004091433.1 | type IV secretory system conjugative DNA transfer family protein | - |
| F7G16_RS11820 () | 25870..26406 | + | 537 | WP_004091431.1 | conjugative transfer signal peptidase TraF | - |
| F7G16_RS11825 () | 26435..28492 | + | 2058 | WP_128712475.1 | DNA topoisomerase 3 | - |
| F7G16_RS11830 () | 28495..28857 | + | 363 | WP_004091427.1 | hypothetical protein | - |
| F7G16_RS11835 () | 28863..32978 | + | 4116 | WP_004091425.1 | DUF1738 domain-containing protein | - |
| F7G16_RS11840 () | 33102..33527 | + | 426 | WP_004091423.1 | antirestriction protein | - |
| F7G16_RS11845 () | 33795..34052 | + | 258 | WP_038229233.1 | hypothetical protein | - |
| F7G16_RS11850 () | 34246..34878 | - | 633 | WP_004091419.1 | YkgJ family cysteine cluster protein | - |
| F7G16_RS11855 () | 34999..35556 | - | 558 | WP_004091417.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| F7G16_RS11860 () | 35746..36120 | - | 375 | WP_010894485.1 | DUF5615 family PIN-like protein | - |
| F7G16_RS11865 () | 36117..36347 | - | 231 | WP_004091411.1 | DUF433 domain-containing protein | - |
| F7G16_RS11870 () | 36553..36858 | - | 306 | WP_004091409.1 | BrnA antitoxin family protein | Antitoxin Detail |
| F7G16_RS11875 () | 36845..37135 | - | 291 | WP_038229226.1 | BrnT family toxin | Toxin Detail |
| F7G16_RS11880 () | 37312..37485 | + | 174 | Protein_42 | XRE family transcriptional regulator | - |
| F7G16_RS11885 () | 37596..37916 | + | 321 | WP_004091397.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F7G16_RS11890 () | 38046..38372 | + | 327 | WP_004091396.1 | DNA-binding protein | - |
| F7G16_RS11895 () | 38514..39440 | - | 927 | WP_051606204.1 | hypothetical protein | - |
| F7G16_RS11900 () | 39846..40262 | - | 417 | WP_038232460.1 | IS200-IS605 family transposase IS609 | Transposase |
| F7G16_RS11905 () | 40285..41442 | + | 1158 | WP_038232468.1 | IS200-IS605 family transposase IS609 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|