MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 195485 bp
Accession: NZ_CP044329 Location: 1..195485 Organism: Methylocystis rosea strain BRCS1 Replicon: plasmid unnamed1
Accession: NZ_CP044329 Location: 1..195485 Organism: Methylocystis rosea strain BRCS1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D13_RS16335 () | 849..2282 | + | 1434 | Protein_0 | ATP synthase subunit beta | VF |
| F7D13_RS16340 () | 2279..2662 | + | 384 | Protein_1 | F0F1 ATP synthase subunit epsilon | - |
| F7D13_RS16345 () | 2729..3125 | + | 397 | Protein_2 | AtpZ/AtpI family protein | - |
| F7D13_RS16350 () | 3443..4363 | + | 921 | WP_154453877.1 | tetratricopeptide repeat protein | - |
| F7D13_RS16355 () | 4378..4960 | + | 583 | Protein_4 | F0F1 ATP synthase subunit A | - |
| F7D13_RS16360 () | 4970..5203 | + | 234 | Protein_5 | F0F1 ATP synthase subunit C | - |
| F7D13_RS16365 () | 5214..5900 | + | 687 | WP_154453878.1 | hypothetical protein | - |
| F7D13_RS16370 () | 5953..7484 | + | 1532 | Protein_7 | ATP synthase subunit alpha | VF |
| F7D13_RS16375 () | 7481..8110 | + | 630 | WP_154453879.1 | F0F1 ATP synthase subunit gamma | - |
| F7D13_RS16380 () | 8110..8325 | + | 216 | WP_154453880.1 | F0F1 ATP synthase subunit gamma | - |
| F7D13_RS16385 () | 8515..8712 | + | 198 | WP_154453881.1 | hypothetical protein | - |
| F7D13_RS16390 () | 9015..12166 | - | 3152 | Protein_11 | efflux RND transporter permease subunit | - |
| F7D13_RS16395 () | 12209..13480 | - | 1272 | WP_154453996.1 | efflux RND transporter periplasmic adaptor subunit | - |
| F7D13_RS16400 () | 13548..14936 | - | 1389 | WP_154453997.1 | TolC family protein | - |
| F7D13_RS16405 () | 15107..17619 | - | 2513 | Protein_14 | TonB-dependent receptor | - |
| F7D13_RS16410 () | 17768..18166 | - | 399 | WP_195838298.1 | nickel-responsive transcriptional regulator NikR | - |
| F7D13_RS18365 () | 19369..19629 | - | 261 | WP_195838299.1 | hypothetical protein | - |
| F7D13_RS16420 () | 20078..22198 | - | 2121 | WP_154453883.1 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| F7D13_RS16425 () | 22434..22910 | + | 477 | WP_154453884.1 | hypothetical protein | - |
| F7D13_RS16430 () | 22907..23101 | + | 195 | WP_154453885.1 | hypothetical protein | - |
| F7D13_RS16435 () | 23164..24630 | + | 1467 | WP_154453886.1 | glucan 1,4-alpha-glucosidase | - |
| F7D13_RS16440 () | 24645..25463 | - | 819 | WP_154453887.1 | ROK family protein | - |
| F7D13_RS16445 () | 25719..25871 | - | 153 | WP_154453888.1 | IS5 family transposase ISPaes2 | Transposase |
| F7D13_RS16450 () | 26648..27280 | - | 633 | WP_154453889.1 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| F7D13_RS16455 () | 27821..28975 | - | 1155 | Protein_24 | IS630 family transposase ISAcma29 | Transposase |
| F7D13_RS16460 () | 29197..32346 | + | 3150 | WP_195838300.1 | Cadmium-transporting ATPase | VF |
| F7D13_RS16465 () | 32403..33737 | - | 1335 | WP_195838301.1 | HAMP domain-containing histidine kinase | - |
| F7D13_RS16470 () | 33785..34447 | - | 663 | WP_154453891.1 | Transcriptional regulatory protein QseB | VF |
| F7D13_RS16475 () | 34447..34779 | - | 333 | WP_154453892.1 | PepSY domain-containing protein | - |
| F7D13_RS16480 () | 34973..36274 | + | 1302 | WP_154453893.1 | efflux RND transporter periplasmic adaptor subunit | - |
| F7D13_RS16485 () | 36287..39517 | + | 3231 | WP_154453894.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| F7D13_RS16490 () | 39538..40920 | + | 1383 | WP_154453998.1 | TolC family outer membrane protein | - |
| F7D13_RS16495 () | 41281..41751 | + | 471 | WP_154453895.1 | nickel-responsive transcriptional regulator NikR | - |
| F7D13_RS16500 () | 42324..42692 | + | 369 | WP_154453896.1 | CsbD family protein | - |
| F7D13_RS16505 () | 42995..43189 | - | 195 | WP_154453897.1 | hypothetical protein | - |
| F7D13_RS16510 () | 43280..43849 | - | 570 | WP_154453898.1 | hypothetical protein | - |
| F7D13_RS16515 () | 44426..44674 | - | 249 | Protein_36 | thermonuclease family protein | - |
| F7D13_RS16520 () | 44919..45230 | + | 312 | Protein_37 | hypothetical protein | - |
| F7D13_RS16525 () | 45594..45842 | - | 249 | WP_154453899.1 | helix-turn-helix domain-containing protein | - |
| F7D13_RS16530 () | 45999..46271 | + | 273 | WP_154453900.1 | hypothetical protein | - |
| F7D13_RS16535 () | 46357..47025 | + | 669 | WP_154453901.1 | hypothetical protein | - |
| F7D13_RS16540 () | 47022..47630 | + | 609 | WP_154453902.1 | hypothetical protein | - |
| F7D13_RS16545 () | 48484..48822 | - | 339 | WP_154453903.1 | hypothetical protein | - |
| F7D13_RS16550 () | 48987..49412 | + | 426 | WP_154453999.1 | universal stress protein | - |
| F7D13_RS16560 () | 49666..50175 | - | 510 | WP_154453904.1 | invasion associated locus B family protein | - |
| F7D13_RS16565 () | 50428..51462 | + | 1035 | WP_154453905.1 | IS630 family transposase ISAzo30 | Transposase |
| F7D13_RS16570 () | 51710..52858 | - | 1149 | WP_154453906.1 | hypothetical protein | - |
| F7D13_RS16575 () | 53154..53867 | - | 714 | WP_154453907.1 | SMC-Scp complex subunit ScpB | - |
| F7D13_RS16580 () | 53987..55048 | - | 1062 | WP_154453908.1 | DUF1403 family protein | - |
| F7D13_RS16585 () | 55583..56635 | + | 1053 | WP_154453909.1 | tyrosine-type recombinase/integrase | - |
| F7D13_RS16590 () | 56760..57038 | + | 279 | WP_154454000.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F7D13_RS16595 () | 57040..57336 | + | 297 | WP_154453910.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| F7D13_RS18370 () | 57511..57849 | + | 339 | WP_195838302.1 | DUF433 domain-containing protein | - |
| F7D13_RS16605 () | 57933..58151 | - | 219 | WP_154453911.1 | hypothetical protein | - |
| F7D13_RS16610 () | 58227..59603 | - | 1377 | WP_154453912.1 | replication initiation protein RepC | - |
| F7D13_RS16615 () | 59756..60751 | - | 996 | WP_154454001.1 | plasmid partitioning protein RepB | - |
| F7D13_RS16620 () | 60830..62041 | - | 1212 | WP_154453913.1 | Sporulation initiation inhibitor protein Soj | VF |
| F7D13_RS16625 () | 62334..63284 | - | 951 | WP_154453914.1 | DUF2493 domain-containing protein | - |
| F7D13_RS16630 () | 63685..64271 | - | 587 | Protein_58 | DUF2269 domain-containing protein | - |
| F7D13_RS16635 () | 64276..64734 | - | 459 | WP_154454002.1 | MarR family transcriptional regulator | - |
| F7D13_RS16640 () | 66108..67007 | + | 900 | WP_154454003.1 | DUF2786 domain-containing protein | - |
| F7D13_RS16645 () | 67048..68064 | - | 1017 | WP_195838303.1 | toprim domain-containing protein | - |
| F7D13_RS16650 () | 68080..72543 | - | 4464 | WP_154453915.1 | strawberry notch family protein | - |
| F7D13_RS16655 () | 72654..73493 | - | 840 | WP_154453916.1 | hypothetical protein | - |
| F7D13_RS16660 () | 73582..75714 | - | 2133 | WP_154453917.1 | ParB/RepB/Spo0J family partition protein | - |
| F7D13_RS16665 () | 76072..79887 | - | 3816 | WP_154453918.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| F7D13_RS16670 () | 79952..80518 | - | 567 | WP_154453919.1 | AbiV family abortive infection protein | - |
| F7D13_RS16675 () | 80493..81029 | - | 537 | WP_154453920.1 | hypothetical protein | - |
| F7D13_RS16680 () | 81315..82256 | - | 942 | WP_154453921.1 | hypothetical protein | - |
| F7D13_RS16685 () | 82243..82635 | - | 393 | WP_154453922.1 | helix-turn-helix domain-containing protein | - |
| F7D13_RS16690 () | 82839..83141 | + | 303 | WP_154454005.1 | multiubiquitin domain-containing protein | - |
| F7D13_RS16695 () | 83145..83546 | + | 402 | WP_154453923.1 | hypothetical protein | - |
| F7D13_RS16700 () | 83543..84958 | + | 1416 | WP_154453924.1 | ThiF family adenylyltransferase | - |
| F7D13_RS16705 () | 85951..86742 | - | 792 | WP_154453925.1 | hypothetical protein | - |
| F7D13_RS16710 () | 86828..87745 | - | 918 | WP_154453926.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| F7D13_RS16715 () | 87732..88574 | - | 843 | WP_154454006.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| F7D13_RS16720 () | 88729..89295 | + | 567 | WP_154453927.1 | hypothetical protein | - |
| F7D13_RS16725 () | 89295..90689 | + | 1395 | WP_154453928.1 | 7-cyano-7-deazaguanine synthase | - |
| F7D13_RS16730 () | 90673..91851 | + | 1179 | WP_154453929.1 | ImmA/IrrE family metallo-endopeptidase | - |
| F7D13_RS16735 () | 91829..92461 | + | 633 | WP_154453930.1 | hypothetical protein | - |
| F7D13_RS16740 () | 92653..93024 | + | 372 | WP_154453931.1 | hypothetical protein | - |
| F7D13_RS16745 () | 93146..93871 | - | 726 | WP_154454007.1 | autoinducer binding domain-containing protein | - |
| F7D13_RS16750 () | 94214..94762 | + | 549 | WP_154453932.1 | Type IV secretion system protein virB1 | VF |
| F7D13_RS16755 () | 94814..95107 | + | 294 | WP_154454008.1 | Type IV secretion system protein virB2 | VF |
| F7D13_RS16760 () | 95156..95491 | + | 336 | WP_154453933.1 | Type IV secretion system protein virB3 | VF |
| F7D13_RS16765 () | 95484..97856 | + | 2373 | WP_154453934.1 | Type IV secretion system protein virB4 | VF |
| F7D13_RS16770 () | 97853..98563 | + | 711 | WP_154453935.1 | P-type DNA transfer protein VirB5 | - |
| F7D13_RS16775 () | 98560..98841 | + | 282 | WP_154453936.1 | EexN family lipoprotein | - |
| F7D13_RS16780 () | 98844..99827 | + | 984 | WP_154453937.1 | Type IV secretion system protein VirB6 | VF |
| F7D13_RS16785 () | 99883..100161 | + | 279 | WP_154454009.1 | hypothetical protein | VF |
| F7D13_RS16790 () | 100154..100828 | + | 675 | WP_154453938.1 | Type IV secretion system protein virB8 | VF |
| F7D13_RS16795 () | 100825..101688 | + | 864 | WP_154453939.1 | Type IV secretion system protein virB9 | VF |
| F7D13_RS16800 () | 101719..102876 | + | 1158 | WP_154453940.1 | Type IV secretion system protein virB10 | VF |
| F7D13_RS16805 () | 102873..103946 | + | 1074 | WP_154453941.1 | Type IV secretion system protein VirB11 | VF |
| F7D13_RS16810 () | 103936..106011 | + | 2076 | WP_154453942.1 | Protein VirD4 | VF |
| F7D13_RS16815 () | 106004..106819 | + | 816 | WP_154453943.1 | hypothetical protein | - |
| F7D13_RS16820 () | 106872..107285 | - | 414 | WP_154453944.1 | hypothetical protein | - |
| F7D13_RS16825 () | 107567..108415 | + | 849 | WP_154453945.1 | P-loop NTPase | - |
| F7D13_RS16830 () | 108504..108954 | + | 451 | Protein_98 | rhodanese-like domain-containing protein | - |
| F7D13_RS16835 () | 108973..110016 | - | 1044 | WP_154453946.1 | T-DNA border endonuclease VirD2 | Relaxase |
| F7D13_RS16840 () | 110016..110534 | - | 519 | WP_154453947.1 | hypothetical protein | Relaxase |
| F7D13_RS16845 () | 110887..111876 | - | 990 | WP_154453948.1 | ParB/RepB/Spo0J family partition protein | - |
| F7D13_RS16850 () | 111873..112784 | - | 912 | WP_154453949.1 | ParA family protein | - |
| F7D13_RS16855 () | 113263..113661 | - | 399 | WP_154453950.1 | single-stranded DNA-binding protein | - |
| F7D13_RS16860 () | 114360..115298 | - | 939 | WP_154454010.1 | radical SAM protein | - |
| F7D13_RS16865 () | 115345..116486 | + | 1142 | Protein_105 | AmmeMemoRadiSam system radical SAM enzyme | - |
| F7D13_RS16870 () | 116537..117414 | - | 878 | Protein_106 | M28 family peptidase | - |
| F7D13_RS16875 () | 117575..118054 | - | 480 | WP_154453951.1 | IS607 family transposase ISChh1 | Transposase |
| F7D13_RS16880 () | 118343..118750 | + | 408 | WP_154453952.1 | mercuric ion transporter MerT | - |
| F7D13_RS16885 () | 118766..119044 | + | 279 | WP_154453953.1 | mercury resistance system periplasmic binding protein MerP | - |
| F7D13_RS16890 () | 119102..120886 | + | 1785 | WP_195838304.1 | mercury(II) reductase | - |
| F7D13_RS16895 () | 120890..121210 | + | 321 | WP_154453954.1 | hypothetical protein | - |
| F7D13_RS16900 () | 121360..121878 | + | 519 | WP_154453955.1 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| F7D13_RS16905 () | 122018..122353 | + | 336 | WP_154453956.1 | hypothetical protein | - |
| F7D13_RS16910 () | 122701..123144 | + | 444 | WP_109027155.1 | copper-binding protein | - |
| F7D13_RS16915 () | 123299..123583 | + | 285 | WP_154453957.1 | DUF2933 domain-containing protein | - |
| F7D13_RS16920 () | 123586..124251 | + | 666 | WP_154453958.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| F7D13_RS16925 () | 124293..126197 | + | 1905 | WP_154453959.1 | DUF3141 domain-containing protein | - |
| F7D13_RS16930 () | 126546..127352 | + | 807 | WP_154453960.1 | polyphosphate kinase 2 | - |
| F7D13_RS16935 () | 127606..130011 | + | 2406 | WP_154453961.1 | phosphoenolpyruvate synthase | - |
| F7D13_RS16940 () | 130184..131206 | + | 1023 | WP_154453962.1 | hydroxyacid dehydrogenase | - |
| F7D13_RS16945 () | 131631..132488 | - | 858 | WP_154453963.1 | methyltransferase domain-containing protein | - |
| F7D13_RS16950 () | 132826..133122 | + | 297 | WP_154453964.1 | hypothetical protein | - |
| F7D13_RS16955 () | 133180..134649 | - | 1470 | WP_154453965.1 | glucan 1,4-alpha-glucosidase | - |
| F7D13_RS16960 () | 134694..136103 | - | 1410 | WP_109026248.1 | beta-glucosidase | - |
| F7D13_RS16965 () | 136146..137972 | - | 1827 | WP_109026247.1 | ABC transporter ATP-binding protein/permease | - |
| F7D13_RS16970 () | 138314..139861 | + | 1548 | WP_154453966.1 | hypothetical protein | - |
| F7D13_RS16975 () | 139839..140789 | + | 951 | WP_154453967.1 | hypothetical protein | - |
| F7D13_RS18450 () | 140787..140990 | - | 204 | Protein_128 | IS21 family transposase ISRel16 | Transposase |
| F7D13_RS18380 () | 141047..142351 | + | 1305 | Protein_129 | IS21 family transposase ISMdi27 | Transposase |
| F7D13_RS16990 () | 142321..142482 | + | 162 | Protein_130 | IS21 family transposase ISMsi1 | Transposase |
| F7D13_RS16995 () | 142514..143086 | - | 573 | Protein_131 | helix-turn-helix domain-containing protein | - |
| F7D13_RS17000 () | 143263..144309 | + | 1047 | WP_154453969.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| F7D13_RS17005 () | 144974..148099 | + | 3126 | WP_195838295.1 | heavy metal translocating P-type ATPase | - |
| F7D13_RS17010 () | 148173..149111 | + | 939 | WP_154453971.1 | 1-phosphofructokinase family hexose kinase | - |
| F7D13_RS17015 () | 149148..149335 | - | 188 | Protein_135 | PLP-dependent transferase | - |
| F7D13_RS18385 () | 149467..149603 | + | 137 | Protein_136 | IS256 family transposase | - |
| F7D13_RS17020 () | 149697..150407 | - | 711 | WP_109026229.1 | RES family NAD+ phosphorylase | - |
| F7D13_RS17025 () | 150404..150817 | - | 414 | WP_154453972.1 | MbcA/ParS/Xre antitoxin family protein | - |
| F7D13_RS17030 () | 151013..151723 | - | 711 | WP_109026227.1 | SMC-Scp complex subunit ScpB | - |
| F7D13_RS17035 () | 151785..152156 | - | 372 | WP_154453973.1 | DUF1403 family protein | - |
| F7D13_RS17040 () | 152223..153647 | - | 1425 | WP_154453974.1 | IS21 family transposase ISBj11 | Transposase |
| F7D13_RS17045 () | 153814..154749 | + | 936 | Protein_142 | ISNCY family transposase ISBj12 | Transposase |
| F7D13_RS17050 () | 154897..156114 | + | 1218 | WP_154454012.1 | family 1 glycosylhydrolase | - |
| F7D13_RS17055 () | 156426..156602 | - | 177 | WP_154453975.1 | hypothetical protein | - |
| F7D13_RS17060 () | 156793..158616 | - | 1824 | WP_195838296.1 | ABC transporter ATP-binding protein/permease | - |
| F7D13_RS17065 () | 159109..159480 | + | 372 | WP_109026224.1 | IS256 family transposase IS1354 | Transposase |
| F7D13_RS17070 () | 159571..160302 | - | 732 | WP_154453977.1 | IS110 family transposase ISMmg1 | Transposase |
| F7D13_RS17080 () | 160751..161785 | + | 1035 | WP_154453905.1 | IS630 family transposase ISAzo30 | Transposase |
| F7D13_RS17085 () | 161767..162435 | - | 669 | WP_154453979.1 | polyphosphate kinase 2 | - |
| F7D13_RS17090 () | 162634..162972 | + | 339 | WP_146190066.1 | hypothetical protein | - |
| F7D13_RS17095 () | 163277..163684 | + | 408 | WP_109026219.1 | TolC family protein | - |
| F7D13_RS17100 () | 163681..165099 | + | 1419 | WP_154453980.1 | efflux RND transporter periplasmic adaptor subunit | - |
| F7D13_RS17105 () | 165096..168257 | + | 3162 | WP_154453981.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| F7D13_RS18455 () | 168529..168825 | + | 297 | WP_210384643.1 | hypothetical protein | - |
| F7D13_RS17110 () | 168935..169297 | + | 363 | WP_154453982.1 | copper-binding protein | - |
| F7D13_RS17115 () | 169504..169944 | + | 441 | WP_154453983.1 | DUF411 domain-containing protein | - |
| F7D13_RS17120 () | 170012..172540 | + | 2529 | WP_195838306.1 | heavy metal translocating P-type ATPase | - |
| F7D13_RS17125 () | 172537..173184 | + | 648 | Protein_158 | tetratricopeptide repeat protein | - |
| F7D13_RS17130 () | 173209..173598 | + | 390 | WP_195838307.1 | cupredoxin domain-containing protein | - |
| F7D13_RS17135 () | 173637..173927 | + | 291 | WP_154453985.1 | DUF2933 domain-containing protein | - |
| F7D13_RS17140 () | 173955..174620 | + | 666 | WP_154453986.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| F7D13_RS18390 () | 175241..175445 | + | 205 | Protein_162 | transposase | - |
| F7D13_RS17145 () | 176041..176163 | + | 123 | Protein_163 | fructose-bisphosphate aldolase | - |
| F7D13_RS17150 () | 176192..176407 | + | 216 | WP_154453987.1 | hypothetical protein | - |
| F7D13_RS17155 () | 177309..177665 | - | 357 | WP_154453988.1 | hypothetical protein | - |
| F7D13_RS17160 () | 177999..178487 | + | 489 | WP_154453989.1 | hypothetical protein | - |
| F7D13_RS17165 () | 178989..180307 | + | 1319 | Protein_167 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| F7D13_RS17170 () | 180391..181425 | - | 1035 | WP_154453905.1 | IS630 family transposase ISAzo30 | Transposase |
| F7D13_RS17175 () | 181487..181843 | + | 357 | WP_154453990.1 | hypothetical protein | - |
| F7D13_RS17180 () | 182302..182637 | - | 336 | WP_154453991.1 | hypothetical protein | - |
| F7D13_RS17185 () | 183483..184244 | - | 762 | WP_154453992.1 | hypothetical protein | - |
| F7D13_RS17190 () | 184248..185930 | - | 1683 | WP_195838297.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| F7D13_RS17195 () | 186284..186848 | - | 565 | Protein_173 | hypothetical protein | - |
| F7D13_RS17200 () | 186763..188028 | - | 1266 | WP_154453994.1 | type II restriction endonuclease | - |
| F7D13_RS17205 () | 188287..188985 | + | 699 | Protein_175 | IS5 family transposase ISAli1 | Transposase |
| F7D13_RS17210 () | 189375..190976 | + | 1602 | Protein_176 | recombinase family protein | - |
| F7D13_RS17215 () | 191035..191169 | + | 135 | Protein_177 | IS5/IS1182 family transposase | - |
| F7D13_RS17220 () | 191308..192371 | + | 1064 | Protein_178 | IS110 family transposase ISAzs32 | Transposase |
| F7D13_RS17225 () | 192830..193255 | - | 426 | WP_154453995.1 | hypothetical protein | - |
| F7D13_RS17230 () | 193255..193542 | - | 288 | WP_124740360.1 | hypothetical protein | - |
| F7D13_RS17235 () | 194968..195279 | + | 312 | WP_124740359.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|