MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 138674 bp
Accession: NZ_CP044314 Location: 997260..1135933 Organism: Escherichia coli strain RM9245 Replicon: chromosome
Accession: NZ_CP044314 Location: 997260..1135933 Organism: Escherichia coli strain RM9245 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D03_RS04885 () | 992517..993257 | - | 741 | WP_024200903.1 | porin family protein | - |
| F7D03_RS04890 () | 993690..995516 | + | 1827 | WP_001106666.1 | two-component system sensor histidine kinase AtoS | - |
| F7D03_RS04895 () | 995513..996898 | + | 1386 | WP_000125284.1 | acetoacetate metabolism transcriptional regulator AtoC | - |
| F7D03_RS04900 () | 997094..997756 | + | 663 | WP_000850528.1 | acetate CoA-transferase subunit alpha | - |
| F7D03_RS04905 () | 997756..998406 | + | 651 | WP_000339054.1 | acetate CoA-transferase subunit beta | - |
| F7D03_RS04910 () | 998403..999725 | + | 1323 | WP_000580275.1 | TIGR00366 family protein | - |
| F7D03_RS04915 () | 999756..1000940 | + | 1185 | WP_000786522.1 | acetyl-CoA acetyltransferase | - |
| F7D03_RS04920 () | 1001350..1002006 | - | 657 | Protein_939 | IS66 family transposase ISEc23 | Transposase |
| F7D03_RS04935 () | 1003095..1003274 | + | 180 | WP_071531291.1 | hypothetical protein | - |
| F7D03_RS04940 () | 1003326..1003519 | + | 194 | Protein_941 | hypothetical protein | - |
| F7D03_RS04945 () | 1004321..1004657 | - | 337 | Protein_942 | hypothetical protein | - |
| F7D03_RS04955 () | 1005326..1005547 | - | 222 | WP_000477612.1 | hypothetical protein | - |
| F7D03_RS04960 () | 1006531..1007624 | + | 1094 | WP_085947918.1 | IS3 family transposase ISEc17 | Transposase |
| F7D03_RS04970 () | 1008263..1010350 | + | 2088 | WP_001223359.1 | bifunctional siderophore receptor/adhesin Iha | - |
| F7D03_RS04975 () | 1010491..1010682 | - | 192 | Protein_946 | IS256 family transposase ISEic2 | Transposase |
| F7D03_RS04980 () | 1010696..1012540 | - | 1845 | WP_000593011.1 | Vitamin B12 transporter BtuB | VF |
| F7D03_RS04990 () | 1013441..1013698 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| F7D03_RS04995 () | 1013767..1015464 | - | 1698 | WP_000401036.1 | sulfatase | - |
| F7D03_RS05000 () | 1015559..1016695 | - | 1137 | WP_001228923.1 | hypothetical protein | VF |
| F7D03_RS05005 () | 1017371..1017579 | + | 209 | Protein_951 | IS66 family insertion sequence element accessory protein TnpB | - |
| F7D03_RS05010 () | 1017566..1017878 | + | 313 | Protein_952 | IS66 family insertion sequence element accessory protein TnpB | - |
| F7D03_RS05020 () | 1018832..1019569 | + | 738 | Protein_953 | AraC family transcriptional regulator | - |
| F7D03_RS05025 () | 1020468..1024559 | + | 4092 | WP_072161482.1 | hypothetical protein | VF |
| F7D03_RS05035 () | 1025065..1025430 | + | 366 | WP_000997728.1 | hypothetical protein | - |
| F7D03_RS05040 () | 1025440..1025631 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| F7D03_RS05045 () | 1025665..1025874 | + | 210 | WP_000323309.1 | hypothetical protein | - |
| F7D03_RS05050 () | 1025901..1026260 | - | 360 | Protein_958 | IS66 family transposase ISCro1 | Transposase |
| F7D03_RS05055 () | 1026372..1027016 | - | 645 | WP_001378814.1 | hypothetical protein | - |
| F7D03_RS05060 () | 1027037..1027306 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| F7D03_RS05065 () | 1027385..1028023 | - | 639 | WP_000502848.1 | ParB N-terminal domain-containing protein | - |
| F7D03_RS05070 () | 1028008..1029240 | - | 1233 | WP_096549186.1 | phosphoadenosine phosphosulfate reductase | - |
| F7D03_RS05075 () | 1029740..1032421 | - | 2682 | WP_000256225.1 | DUF2726 domain-containing protein | - |
| F7D03_RS25500 () | 1032662..1032842 | - | 181 | Protein_964 | hypothetical protein | VF |
| F7D03_RS25505 () | 1033161..1033424 | - | 264 | Protein_965 | hypothetical protein | VF |
| F7D03_RS05090 () | 1033909..1035654 | - | 1746 | WP_024200930.1 | AAA family ATPase | - |
| F7D03_RS05095 () | 1035832..1036407 | - | 576 | WP_000737515.1 | hypothetical protein | VF |
| F7D03_RS05105 () | 1036951..1037193 | - | 243 | WP_000993065.1 | hypothetical protein | - |
| F7D03_RS05110 () | 1037200..1037472 | - | 273 | WP_000906734.1 | hypothetical protein | - |
| F7D03_RS05115 () | 1037607..1037882 | - | 276 | WP_000549471.1 | hypothetical protein | - |
| F7D03_RS05120 () | 1037911..1038094 | + | 184 | Protein_971 | transposase domain-containing protein | - |
| F7D03_RS05125 () | 1038136..1038663 | - | 528 | WP_000182867.1 | hypothetical protein | - |
| F7D03_RS05135 () | 1039095..1040628 | - | 1534 | Protein_973 | IS3 family transposase | - |
| F7D03_RS05145 () | 1041563..1050499 | - | 8937 | WP_033811935.1 | hypothetical protein | VF |
| F7D03_RS05150 () | 1050515..1051042 | - | 528 | WP_001243916.1 | hypothetical protein | VF |
| F7D03_RS05155 () | 1051052..1052704 | - | 1653 | WP_001379178.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| F7D03_RS05160 () | 1053380..1053571 | + | 192 | WP_001287885.1 | DUF4222 domain-containing protein | - |
| F7D03_RS05165 () | 1053624..1053857 | - | 234 | WP_000124190.1 | hypothetical protein | - |
| F7D03_RS05170 () | 1053953..1054576 | - | 624 | WP_001366001.1 | hypothetical protein | - |
| F7D03_RS05175 () | 1054665..1055162 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| F7D03_RS05180 () | 1055512..1055919 | - | 408 | WP_179763680.1 | inovirus-type Gp2 protein | - |
| F7D03_RS05185 () | 1056106..1056303 | - | 198 | WP_000553835.1 | inovirus-type Gp2 protein | - |
| F7D03_RS05190 () | 1056552..1056977 | - | 426 | WP_001013762.1 | hypothetical protein | - |
| F7D03_RS05195 () | 1056974..1057357 | - | 384 | WP_000271031.1 | hypothetical protein | - |
| F7D03_RS05200 () | 1057618..1058187 | - | 570 | WP_000221484.1 | inovirus Gp2 family protein | - |
| F7D03_RS05205 () | 1058391..1058588 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| F7D03_RS05210 () | 1058934..1059083 | - | 150 | WP_052904223.1 | hemolysin activation protein | - |
| F7D03_RS05215 () | 1059835..1060041 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| F7D03_RS05220 () | 1060128..1060730 | + | 603 | WP_000804456.1 | hypothetical protein | - |
| F7D03_RS05230 () | 1061052..1062536 | - | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| F7D03_RS05235 () | 1063767..1064639 | + | 873 | WP_001069673.1 | GTPase family protein | - |
| F7D03_RS05240 () | 1064967..1068086 | + | 3120 | WP_000820542.1 | autotransporter adhesin Ag43 | - |
| F7D03_RS05245 () | 1068207..1070723 | + | 2517 | WP_001379184.1 | hypothetical protein | - |
| F7D03_RS05250 () | 1070799..1071254 | + | 456 | WP_000581504.1 | hypothetical protein | - |
| F7D03_RS05255 () | 1071333..1071566 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| F7D03_RS05265 () | 1071666..1072485 | + | 820 | Protein_996 | DUF945 domain-containing protein | - |
| F7D03_RS05270 () | 1072540..1073025 | + | 486 | WP_000849580.1 | antirestriction protein | - |
| F7D03_RS05275 () | 1073041..1073517 | + | 477 | WP_001186727.1 | RadC family protein | - |
| F7D03_RS05280 () | 1073604..1073825 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| F7D03_RS05285 () | 1073905..1074273 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| F7D03_RS05290 () | 1074363..1074740 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| F7D03_RS05295 () | 1074737..1074934 | + | 198 | Protein_1002 | hypothetical protein | - |
| F7D03_RS05300 () | 1074962..1075159 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| F7D03_RS05305 () | 1075244..1076086 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| F7D03_RS05310 () | 1076367..1076903 | - | 537 | WP_000942794.1 | hypothetical protein | VF |
| F7D03_RS05315 () | 1076905..1078083 | - | 1179 | WP_000094989.1 | hypothetical protein | VF |
| F7D03_RS05320 () | 1078080..1079057 | - | 978 | WP_000633239.1 | hypothetical protein | VF |
| F7D03_RS05325 () | 1079054..1079659 | - | 606 | WP_001255030.1 | hypothetical protein | VF |
| F7D03_RS05330 () | 1079656..1080027 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| F7D03_RS05335 () | 1080024..1080587 | - | 564 | WP_001115139.1 | hypothetical protein | VF |
| F7D03_RS05340 () | 1080591..1081046 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| F7D03_RS05345 () | 1081063..1082286 | - | 1224 | WP_001173448.1 | hypothetical protein | VF |
| F7D03_RS05350 () | 1082286..1083779 | - | 1494 | WP_000249368.1 | hypothetical protein | VF |
| F7D03_RS05355 () | 1083779..1085839 | - | 2061 | WP_000498824.1 | hypothetical protein | VF |
| F7D03_RS05360 () | 1085869..1086828 | - | 960 | WP_001317325.1 | hypothetical protein | VF |
| F7D03_RS05365 () | 1086846..1087256 | - | 411 | WP_001349452.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| F7D03_RS05370 () | 1087322..1088131 | - | 810 | WP_001317326.1 | hypothetical protein | VF |
| F7D03_RS05375 () | 1088271..1092840 | - | 4570 | Protein_1018 | hypothetical protein | VF |
| F7D03_RS05380 () | 1093325..1095007 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| F7D03_RS05385 () | 1095363..1097534 | - | 2172 | WP_000084053.1 | malate synthase G | - |
| F7D03_RS05390 () | 1097556..1097960 | - | 405 | WP_000853256.1 | protein GlcG | - |
| F7D03_RS05395 () | 1097965..1099188 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| F7D03_RS05400 () | 1099199..1100251 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| F7D03_RS05405 () | 1100251..1101750 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| F7D03_RS05410 () | 1102001..1102765 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| F7D03_RS05415 () | 1102772..1103914 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| F7D03_RS05420 () | 1104276..1106006 | + | 1731 | WP_000262942.1 | 2-succinylbenzoate--CoA ligase | VF |
| F7D03_RS05425 () | 1106003..1106917 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| F7D03_RS05430 () | 1106949..1107197 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| F7D03_RS05435 () | 1107197..1108369 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| F7D03_RS05440 () | 1108404..1109483 | - | 1080 | WP_001298753.1 | LPS export ABC transporter permease LptG | - |
| F7D03_RS05445 () | 1109480..1110550 | - | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| F7D03_RS05450 () | 1110581..1111141 | - | 561 | WP_001315848.1 | YtfJ family protein | - |
| F7D03_RS05455 () | 1111153..1111977 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| F7D03_RS05460 () | 1111977..1113326 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| F7D03_RS05465 () | 1113372..1114130 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| F7D03_RS05470 () | 1114162..1114875 | - | 714 | WP_001076237.1 | thymidylate kinase | - |
| F7D03_RS05475 () | 1115049..1115741 | + | 693 | WP_001190773.1 | thymidylate kinase | - |
| F7D03_RS05480 () | 1115790..1117289 | - | 1500 | WP_000933279.1 | inorganic phosphate transporter PitB | - |
| F7D03_RS05485 () | 1117581..1119440 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| F7D03_RS05490 () | 1119645..1120511 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| F7D03_RS05500 () | 1120811..1121791 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| F7D03_RS05505 () | 1121913..1122161 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| F7D03_RS05510 () | 1122174..1122515 | - | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| F7D03_RS05515 () | 1122508..1122996 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| F7D03_RS05520 () | 1122989..1123483 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| F7D03_RS05525 () | 1123483..1125186 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| F7D03_RS05530 () | 1125183..1126361 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| F7D03_RS05535 () | 1126351..1127337 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| F7D03_RS05540 () | 1127340..1128458 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| F7D03_RS05545 () | 1128647..1128934 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| F7D03_RS05550 () | 1129053..1129940 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| F7D03_RS05555 () | 1130097..1131137 | + | 1041 | WP_000262154.1 | L-glyceraldehyde 3-phosphate reductase | - |
| F7D03_RS05560 () | 1131177..1131671 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| F7D03_RS05565 () | 1131862..1132746 | + | 885 | WP_000018758.1 | putative oxidoreductase YghA | VF |
| F7D03_RS05570 () | 1133018..1133443 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| F7D03_RS05575 () | 1133450..1134184 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| F7D03_RS05580 () | 1134436..1135623 | + | 1188 | WP_001369830.1 | cystathionine beta-lyase | - |
| F7D03_RS05585 () | 1135763..1136422 | + | 660 | WP_000268414.1 | DedA family protein | - |
| F7D03_RS05590 () | 1136462..1137418 | - | 957 | WP_001295518.1 | DNA-binding transcriptional regulator YqhC | - |
| F7D03_RS05595 () | 1137555..1138718 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| F7D03_RS05600 () | 1138823..1139650 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| F7D03_RS05605 () | 1139850..1140776 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|