NZ_CP0443143946129..4103277

MGE detailed information

MGE type: Prophage        MGE length: 157149 bp
Accession: NZ_CP044314        Location: 3946129..4103277         Organism: Escherichia coli strain RM9245       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F7D03_RS19210 () 3943602..3944675 - 1074 WP_000810275.1 acyltransferase family protein -
F7D03_RS19215 () 3944937..3946136 + 1200 WP_000284714.1 lipoprotein-releasing ABC transporter permease subunit LolC -
F7D03_RS19220 () 3946129..3946830 + 702 WP_001033695.1 hypothetical protein VF
F7D03_RS19225 () 3946830..3948074 + 1245 WP_001251389.1 lipoprotein-releasing ABC transporter permease subunit LolE -
F7D03_RS19230 () 3948103..3949014 + 912 WP_000291270.1 N-acetylglucosamine kinase -
F7D03_RS19235 () 3949030..3949851 + 822 WP_000952736.1 NAD-dependent protein deacylase -
F7D03_RS19240 () 3949990..3950778 - 789 WP_000713472.1 TPM domain-containing protein -
F7D03_RS19245 () 3950775..3951236 - 462 WP_001341497.1 DUF3592 domain-containing protein -
F7D03_RS19250 () 3951294..3952340 - 1047 WP_000759317.1 spermidine/putrescine ABC transporter substrate-binding protein PotD -
F7D03_RS19255 () 3952337..3953131 - 795 WP_000580316.1 spermidine/putrescine ABC transporter permease PotC -
F7D03_RS19260 () 3953298..3954416 - 1119 WP_000074972.1 S-methyl-5'-thioadenosine phosphorylase ; Integrase Integrase
F7D03_RS19265 () 3954385..3954654 - 270 WP_054250470.1 excisionase -
F7D03_RS19270 () 3954716..3957187 - 2472 WP_096560541.1 exonuclease -
F7D03_RS19275 () 3957283..3957471 - 189 WP_064579146.1 DUF1482 family protein -
F7D03_RS19280 () 3957468..3957656 - 189 WP_000450222.1 cell division inhibitor -
F7D03_RS19290 () 3958185..3958700 + 516 WP_000559918.1 hypothetical protein -
F7D03_RS19295 () 3958814..3958966 - 153 WP_000380318.1 DUF1391 family protein -
F7D03_RS19300 () 3959244..3959531 - 288 WP_032211256.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
F7D03_RS19305 () 3959532..3959723 - 192 WP_064579147.1 hypothetical protein Antitoxin Detail
F7D03_RS19310 () 3959692..3960153 - 462 WP_064579148.1 helix-turn-helix domain-containing protein -
F7D03_RS19315 () 3960173..3960544 - 372 WP_000448216.1 hypothetical protein -
F7D03_RS19320 () 3960647..3960928 + 282 WP_021577226.1 helix-turn-helix domain-containing protein -
F7D03_RS19325 () 3960932..3961357 + 426 WP_000693827.1 Rha family transcriptional regulator -
F7D03_RS19330 () 3961426..3962457 + 1032 WP_052909572.1 phage replisome organizer -
F7D03_RS19335 () 3962369..3962911 + 543 WP_072130322.1 replication protein -
F7D03_RS19340 () 3962945..3963661 + 717 WP_047082289.1 DUF1627 domain-containing protein -
F7D03_RS19345 () 3963694..3963975 + 282 WP_072094476.1 DNA-binding protein -
F7D03_RS19350 () 3963972..3964277 + 306 WP_053294093.1 DUF4406 domain-containing protein -
F7D03_RS19355 () 3964425..3964607 + 183 WP_022581296.1 hypothetical protein -
F7D03_RS25585 () 3964600..3964776 + 177 WP_021572550.1 hypothetical protein -
F7D03_RS19360 () 3964773..3965288 + 516 WP_001289992.1 hypothetical protein -
F7D03_RS19365 () 3965522..3965734 + 213 WP_001398985.1 type I toxin-antitoxin system Hok family toxin -
F7D03_RS19370 () 3965901..3966173 + 273 WP_064579150.1 hypothetical protein -
F7D03_RS19375 () 3966175..3967224 + 1050 WP_032284906.1 DUF968 domain-containing protein -
F7D03_RS19380 () 3967237..3967611 + 375 WP_000904388.1 RusA family crossover junction endodeoxyribonuclease -
F7D03_RS19385 () 3967608..3968429 + 822 WP_000762903.1 antitermination protein -
F7D03_RS19390 () 3968656..3968853 + 198 WP_000917741.1 hypothetical protein -
F7D03_RS19395 () 3969004..3970062 + 1059 WP_064579151.1 site-specific DNA-methyltransferase -
F7D03_RS19415 () 3970445..3971404 + 960 WP_000649753.1 Adenine deaminase VF
F7D03_RS19420 () 3971416..3971685 + 270 WP_000738072.1 hypothetical protein VF
F7D03_RS19425 () 3971983..3972306 - 324 Protein_3704 anti-adapter protein IraM -
F7D03_RS19430 () 3972550..3974487 + 1938 WP_151061607.1 SASA family carbohydrate esterase -
F7D03_RS19435 () 3974625..3974804 + 180 WP_000143458.1 DUF1378 family protein -
F7D03_RS19440 () 3974845..3975090 + 246 WP_001290230.1 DUF826 domain-containing protein -
F7D03_RS19445 () 3975168..3975383 + 216 WP_000284490.1 class II holin family protein -
F7D03_RS19450 () 3975387..3976178 + 792 WP_039264424.1 DUF1327 domain-containing protein -
F7D03_RS19455 () 3976690..3977223 + 534 WP_001092874.1 lysozyme -
F7D03_RS19460 () 3977380..3977562 + 183 WP_062896309.1 hypothetical protein -
F7D03_RS19470 () 3977931..3978137 + 207 WP_071974579.1 Rz1 family lipoprotein -
F7D03_RS19475 () 3978202..3978426 + 225 WP_000735655.1 hypothetical protein -
F7D03_RS19485 () 3978919..3979425 + 507 WP_001405844.1 terminase small subunit -
F7D03_RS19490 () 3979397..3981325 + 1929 WP_001499025.1 phage terminase large subunit family protein -
F7D03_RS19495 () 3981309..3981515 + 207 WP_000259002.1 head-tail joining protein -
F7D03_RS19500 () 3981512..3983104 + 1593 WP_096549216.1 phage portal protein -
F7D03_RS19505 () 3983094..3984599 + 1506 WP_001253971.1 S49 family peptidase -
F7D03_RS19510 () 3984636..3984983 + 348 WP_096549215.1 head decoration protein -
F7D03_RS19515 () 3985041..3986069 + 1029 WP_064549420.1 major capsid protein -
F7D03_RS19520 () 3986121..3986504 + 384 WP_047081403.1 DNA-packaging protein FI -
F7D03_RS19525 () 3986497..3986850 + 354 WP_001204531.1 tail attachment protein -
F7D03_RS19530 () 3986866..3987441 + 576 WP_000974993.1 phage tail protein -
F7D03_RS19535 () 3987438..3987833 + 396 WP_000683075.1 phage minor tail U family protein -
F7D03_RS19540 () 3987841..3988590 + 750 WP_052903742.1 phage tail protein -
F7D03_RS19545 () 3988606..3989037 + 432 WP_001299690.1 phage minor tail protein G -
F7D03_RS19550 () 3989064..3989477 + 414 WP_072032653.1 phage tail assembly protein T -
F7D03_RS19555 () 3989458..3992037 + 2580 WP_096549214.1 phage tail tape measure protein -
F7D03_RS19560 () 3992034..3992363 + 330 WP_000847280.1 phage tail protein -
F7D03_RS19565 () 3992363..3993061 + 699 WP_106901605.1 phage minor tail protein L -
F7D03_RS19570 () 3993072..3993815 + 744 WP_106901606.1 C40 family peptidase -
F7D03_RS19575 () 3993761..3994393 + 633 WP_072121435.1 tail assembly protein -
F7D03_RS19580 () 3994633..3998319 + 3687 WP_106901607.1 DUF1983 domain-containing protein -
F7D03_RS19585 () 3998518..3998658 + 141 WP_000078853.1 Hok/Gef family protein -
F7D03_RS19590 () 3998802..4000460 + 1659 WP_050867622.1 ISNCY family transposase KIS Transposase
F7D03_RS19595 () 4000470..4000682 + 213 WP_000438830.1 hypothetical protein -
F7D03_RS19600 () 4000694..4001368 + 675 WP_001373129.1 DUF4376 domain-containing protein -
F7D03_RS19605 () 4001532..4001861 - 330 WP_022581964.1 YkgJ family cysteine cluster protein -
F7D03_RS19610 () 4002027..4002890 - 864 WP_000799399.1 spermidine/putrescine ABC transporter permease PotB -
F7D03_RS19615 () 4002874..4004010 - 1137 WP_000531601.1 hypothetical protein VF
F7D03_RS19620 () 4004260..4005489 + 1230 WP_000359432.1 peptidase T -
F7D03_RS19625 () 4005635..4006756 - 1122 WP_000456506.1 [50S ribosomal protein L16]-arginine 3-hydroxylase -
F7D03_RS19630 () 4007005..4008234 + 1230 WP_000085265.1 hypothetical protein ; Integrase Integrase
F7D03_RS19635 () 4008609..4008797 + 189 WP_000953271.1 AlpA family transcriptional regulator -
F7D03_RS25590 () 4009074..4009277 - 204 WP_000182306.1 hypothetical protein -
F7D03_RS19645 () 4009335..4009514 - 180 WP_000103621.1 hypothetical protein -
F7D03_RS19655 () 4010020..4010199 - 180 WP_000201463.1 hypothetical protein -
F7D03_RS19660 () 4010392..4010955 + 564 WP_001398590.1 host cell division inhibitor Icd-like protein -
F7D03_RS19665 () 4010942..4011142 + 201 WP_032279725.1 hypothetical protein -
F7D03_RS19670 () 4011148..4011447 + 300 WP_000728896.1 DUF4222 domain-containing protein -
F7D03_RS19675 () 4011444..4012841 + 1398 WP_000833612.1 helicase RepA family protein -
F7D03_RS19680 () 4013044..4013295 + 252 WP_024200918.1 hypothetical protein -
F7D03_RS25595 () 4013292..4013606 + 315 WP_001294163.1 hypothetical protein -
F7D03_RS19690 () 4013616..4014026 + 411 WP_000126663.1 single-stranded DNA-binding protein -
F7D03_RS19695 () 4014037..4014285 + 249 WP_000233314.1 PerC family transcriptional regulator -
F7D03_RS19700 () 4014426..4014650 + 225 WP_001142405.1 hypothetical protein -
F7D03_RS19705 () 4014942..4016099 + 1158 WP_001137342.1 phage major capsid protein -
F7D03_RS19710 () 4016139..4016711 + 573 WP_000504057.1 HK97 family phage prohead protease -
F7D03_RS19715 () 4016713..4017924 + 1212 WP_096549225.1 phage portal protein -
F7D03_RS19720 () 4017921..4018259 + 339 WP_001020671.1 phage head closure protein -
F7D03_RS19725 () 4018256..4018552 + 297 WP_000134113.1 head-tail connector protein -
F7D03_RS19730 () 4018552..4018992 + 441 WP_001145905.1 HNH endonuclease -
F7D03_RS19735 () 4018976..4019158 + 183 WP_074404611.1 hypothetical protein -
F7D03_RS19740 () 4019281..4019637 + 357 WP_000113645.1 phage terminase small subunit P27 family -
F7D03_RS19745 () 4019621..4021282 + 1662 WP_000127881.1 terminase large subunit -
F7D03_RS19750 () 4021296..4021577 + 282 WP_000133415.1 hypothetical protein -
F7D03_RS19755 () 4022427..4023887 - 1461 WP_000735412.1 two-component system sensor histidine kinase PhoQ -
F7D03_RS19760 () 4023887..4024558 - 672 WP_001265481.1 hypothetical protein VF
F7D03_RS19765 () 4024726..4026096 - 1371 WP_000423729.1 adenylosuccinate lyase -
F7D03_RS19770 () 4026100..4026741 - 642 WP_001297479.1 high frequency lysogenization protein HflD -
F7D03_RS19775 () 4026777..4027883 - 1107 WP_001297484.1 tRNA 2-thiouridine(34) synthase MnmA -
F7D03_RS19780 () 4027937..4028398 - 462 WP_000476089.1 phosphatase NudJ -
F7D03_RS19785 () 4028391..4029068 - 678 WP_096549218.1 23S rRNA pseudouridine(2457) synthase RluE -
F7D03_RS19790 () 4029240..4030490 + 1251 WP_000444487.1 NADP-dependent isocitrate dehydrogenase -
F7D03_RS19795 () 4030897..4033224 - 2328 WP_000885267.1 ATPase AAA -
F7D03_RS19800 () 4033543..4034670 - 1128 WP_064579187.1 Pyrophosphatase PpaX ; Integrase Integrase
F7D03_RS19805 () 4034651..4034896 - 246 WP_001527050.1 phage excisionase -
F7D03_RS19810 () 4034951..4035487 - 537 WP_000008212.1 HD family hydrolase -
F7D03_RS19815 () 4035616..4036440 - 825 WP_000081287.1 DUF2303 family protein -
F7D03_RS19820 () 4036506..4036868 - 363 WP_000135682.1 hypothetical protein -
F7D03_RS19825 () 4036883..4037193 - 311 Protein_3781 hypothetical protein -
F7D03_RS19835 () 4037469..4037744 - 276 WP_001514782.1 hypothetical protein -
F7D03_RS19840 () 4037753..4037956 - 204 WP_001369946.1 ClpX C4-type zinc finger -
F7D03_RS19845 () 4038233..4038925 - 693 WP_001369890.1 helix-turn-helix transcriptional regulator -
F7D03_RS19855 () 4039023..4039283 + 261 WP_001191674.1 helix-turn-helix transcriptional regulator -
F7D03_RS19860 () 4039276..4039827 + 552 WP_000515847.1 hypothetical protein -
F7D03_RS19865 () 4040003..4040182 + 180 WP_001250269.1 DUF4222 domain-containing protein -
F7D03_RS19870 () 4040172..4041113 + 942 WP_000104988.1 helix-turn-helix domain-containing protein -
F7D03_RS19875 () 4041110..4041603 + 494 Protein_3789 PerC family transcriptional regulator -
F7D03_RS19880 () 4041603..4042256 + 654 WP_001369966.1 phage N-6-adenine-methyltransferase -
F7D03_RS19885 () 4042253..4042579 + 327 WP_096549146.1 LexA family transcriptional regulator -
F7D03_RS19890 () 4042576..4042965 + 390 WP_000767113.1 RusA family crossover junction endodeoxyribonuclease -
F7D03_RS19895 () 4042985..4043827 + 843 WP_001061425.1 KilA-N domain-containing protein -
F7D03_RS19900 () 4043835..4044824 + 990 WP_033812102.1 DUF968 domain-containing protein -
F7D03_RS19905 () 4044842..4045189 + 348 WP_001205449.1 antitermination protein Q -
F7D03_RS19910 () 4045203..4046294 - 1092 WP_001198055.1 MBL fold metallo-hydrolase -
F7D03_RS25600 () 4046318..4046890 - 573 WP_001024069.1 hypothetical protein -
F7D03_RS19920 () 4046887..4047603 - 717 WP_000143147.1 hypothetical protein -
F7D03_RS19925 () 4047979..4048305 + 327 WP_001120498.1 phage holin, lambda family -
F7D03_RS19930 () 4048309..4048785 + 477 WP_001148537.1 glycoside hydrolase family protein -
F7D03_RS19935 () 4048769..4049161 + 393 WP_001369893.1 DUF2570 domain-containing protein -
F7D03_RS19945 () 4049614..4049964 + 351 WP_001140095.1 HNH endonuclease -
F7D03_RS19950 () 4050091..4050585 + 495 WP_000929173.1 phage terminase small subunit P27 family -
F7D03_RS19955 () 4050819..4052315 + 1497 WP_072011717.1 terminase large subunit -
F7D03_RS19960 () 4052327..4052509 + 183 WP_000605606.1 hypothetical protein -
F7D03_RS19965 () 4052509..4053750 + 1242 WP_000466253.1 phage portal protein -
F7D03_RS19970 () 4053728..4054378 + 651 WP_001398562.1 HK97 family phage prohead protease -
F7D03_RS19975 () 4054393..4055598 + 1206 WP_000257511.1 phage major capsid protein -
F7D03_RS19980 () 4055648..4055848 + 201 WP_000601360.1 hypothetical protein -
F7D03_RS19985 () 4055851..4056174 + 324 WP_000927719.1 head-tail connector protein -
F7D03_RS19990 () 4056171..4056581 + 411 WP_000702388.1 phage head closure protein -
F7D03_RS19995 () 4056556..4057062 + 507 WP_000213502.1 hypothetical protein -
F7D03_RS20000 () 4057059..4057619 + 561 WP_000779292.1 hypothetical protein -
F7D03_RS20005 () 4057628..4057798 + 171 WP_000497751.1 DUF2635 domain-containing protein -
F7D03_RS20010 () 4057782..4059278 + 1497 WP_000155716.1 phage tail sheath subtilisin-like domain-containing protein -
F7D03_RS20015 () 4059278..4059634 + 357 WP_000090998.1 phage tail tube protein -
F7D03_RS20020 () 4059634..4059903 + 270 WP_000811154.1 phage tail assembly protein -
F7D03_RS20030 () 4060045..4061880 + 1836 WP_000807196.1 phage tail tape measure protein -
F7D03_RS20035 () 4061941..4063269 + 1329 WP_000219910.1 DNA circularization N-terminal domain-containing protein -
F7D03_RS20040 () 4063266..4064345 + 1080 WP_000999507.1 hypothetical protein -
F7D03_RS20045 () 4064345..4064893 + 549 WP_001259081.1 phage baseplate assembly protein V -
F7D03_RS20050 () 4064893..4065318 + 426 WP_000424732.1 phage GP46 family protein -
F7D03_RS20055 () 4065305..4066363 + 1059 WP_000785311.1 baseplate J/gp47 family protein -
F7D03_RS20060 () 4066354..4066938 + 585 WP_000383545.1 YmfQ family protein -
F7D03_RS20065 () 4066942..4067724 + 783 WP_000554690.1 phage tail protein -
F7D03_RS20070 () 4067724..4068326 + 603 WP_001057699.1 tail fiber assembly protein -
F7D03_RS20075 () 4068298..4068729 - 432 WP_096549148.1 tail fiber assembly protein -
F7D03_RS20080 () 4068732..4069127 - 396 WP_032193144.1 hypothetical protein -
F7D03_RS20085 () 4069157..4069711 + 555 WP_000905000.1 Tn3 family transposase TnpR_ISPa38 Transposase
F7D03_RS20090 () 4069818..4070651 + 834 WP_000557907.1 5-methylcytosine-specific endonuclease McrA -
F7D03_RS20095 () 4070885..4071049 + 165 WP_000943926.1 isocitrate dehydrogenase -
F7D03_RS20100 () 4071152..4071475 - 324 WP_001307134.1 anti-adapter protein IraM -
F7D03_RS25605 () 4071728..4071772 - 45 WP_120795380.1 protein YmgK -
F7D03_RS20105 () 4072008..4072118 - 111 WP_032141808.1 hypothetical protein -
F7D03_RS20110 () 4072171..4072575 - 405 WP_000373101.1 DUF1398 domain-containing protein -
F7D03_RS20115 () 4072796..4073527 - 732 WP_000332302.1 IS607 family transposase ISAfe11 Transposase
F7D03_RS20120 () 4073732..4074943 - 1212 WP_001297681.1 blue light-responsive regulator BluF -
F7D03_RS20125 () 4075257..4075493 + 237 WP_000554153.1 two-component-system connector protein YcgZ -
F7D03_RS20130 () 4075536..4075808 + 273 WP_000858002.1 two-component-system connector protein YmgA -
F7D03_RS20135 () 4075837..4076103 + 267 WP_000888772.1 biofilm/acid-resistance regulator AriR -
F7D03_RS20140 () 4076216..4076464 + 249 WP_001065752.1 hypothetical protein -
F7D03_RS20145 () 4076796..4078319 + 1524 WP_001246498.1 hypothetical protein VF
F7D03_RS20150 () 4078451..4078669 + 219 WP_001299921.1 hypothetical protein -
F7D03_RS20155 () 4079069..4079278 + 210 WP_001307135.1 hypothetical protein -
F7D03_RS20160 () 4079395..4081716 + 2322 WP_001307136.1 hypothetical protein VF
F7D03_RS20165 () 4081773..4082108 - 336 WP_000979977.1 YmgD family protein -
F7D03_RS20170 () 4082112..4082396 - 285 WP_001304448.1 glycine zipper family protein -
F7D03_RS20175 () 4082458..4082631 - 174 WP_000122462.1 hypothetical protein -
F7D03_RS20180 () 4082732..4082917 + 186 WP_001325743.1 hypothetical protein -
F7D03_RS20185 () 4082878..4082997 + 120 WP_001131446.1 hypothetical protein -
F7D03_RS20190 () 4083032..4083376 + 345 Protein_3851 hypothetical protein VF
F7D03_RS20195 () 4083748..4084014 - 267 WP_001185665.1 cell division topological specificity factor MinE -
F7D03_RS20200 () 4084018..4084830 - 813 WP_000101055.1 hypothetical protein VF
F7D03_RS20205 () 4084854..4085549 - 696 WP_000072536.1 septum site-determining protein MinC -
F7D03_RS20210 () 4086069..4086437 + 369 WP_001056831.1 hypothetical protein -
F7D03_RS20215 () 4086557..4086958 - 402 WP_000695223.1 PPC domain-containing protein -
F7D03_RS20220 () 4087200..4087493 + 294 WP_001297679.1 YcgL domain-containing protein -
F7D03_RS20225 () 4087565..4088224 + 660 WP_000284276.1 fumarylacetoacetate hydrolase family protein -
F7D03_RS20230 () 4088301..4088762 + 462 WP_032153929.1 YcgN family cysteine cluster protein -
F7D03_RS20235 () 4088969..4089879 - 911 Protein_3860 hemolysin HlyE -
F7D03_RS20240 () 4090252..4090671 + 420 WP_000897378.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
F7D03_RS20245 () 4090671..4091939 + 1269 WP_000457616.1 DNA polymerase V catalytic protein -
F7D03_RS20250 () 4091985..4092515 - 531 WP_000943459.1 disulfide bond formation protein DsbB -
F7D03_RS20255 () 4092661..4094202 - 1542 WP_000406391.1 Na(+)/H(+) antiporter NhaB -
F7D03_RS20260 () 4094424..4095143 + 720 WP_000234823.1 fatty acid metabolism transcriptional regulator FadR -
F7D03_RS20265 () 4095195..4096727 - 1533 WP_000190854.1 SpoVR family protein -
F7D03_RS20270 () 4097057..4098355 + 1299 WP_001266908.1 D-amino acid dehydrogenase -
F7D03_RS20275 () 4098365..4099435 + 1071 WP_000197840.1 catabolic alanine racemase DadX -
F7D03_RS20280 () 4099821..4101557 - 1737 WP_000340206.1 potassium/proton antiporter -
F7D03_RS20285 () 4101652..4102566 - 915 WP_000051548.1 muramoyltetrapeptide carboxypeptidase -
F7D03_RS20290 () 4102666..4103277 + 612 WP_001295616.1 membrane-bound lytic murein transglycosylase EmtA -
F7D03_RS20295 () 4103279..4104013 - 735 WP_000020161.1 flagellar brake protein -
F7D03_RS20300 () 4104214..4104468 + 255 WP_000511313.1 GlsB/YeaQ/YmgE family stress response membrane protein -
F7D03_RS20305 () 4104646..4105086 + 441 WP_000615067.1 hypothetical protein -
F7D03_RS20310 () 4105165..4106862 - 1698 WP_000841709.1 alpha,alpha-trehalase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance