MGE detailed information
MGE type: Prophage MGE length: 46413 bp
Accession: NZ_CP044313 Location: 478809..525221 Organism: Escherichia coli strain RM11911 Replicon: chromosome
Accession: NZ_CP044313 Location: 478809..525221 Organism: Escherichia coli strain RM11911 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D04_RS02550 () | 474859..475842 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| F7D04_RS02555 () | 476320..477693 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| F7D04_RS02560 () | 477822..478757 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| F7D04_RS02565 () | 478809..480044 | - | 1236 | WP_072017917.1 | Putative defective protein IntQ ; Integrase | Integrase |
| F7D04_RS02570 () | 480046..480261 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| F7D04_RS02575 () | 480361..480549 | - | 189 | WP_151039308.1 | DUF1187 family protein | - |
| - () | 480365..480543 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 480365..480543 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 480365..480543 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 480365..480543 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| F7D04_RS02580 () | 480542..480736 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| F7D04_RS02585 () | 480800..481888 | - | 1089 | WP_021529594.1 | recombinase RecT | - |
| F7D04_RS02590 () | 481903..484977 | - | 3075 | WP_042973008.1 | exodeoxyribonuclease VIII | - |
| F7D04_RS02595 () | 485079..485353 | - | 275 | Protein_510 | hypothetical protein | - |
| F7D04_RS02600 () | 485428..485598 | - | 171 | WP_001349883.1 | hypothetical protein | - |
| F7D04_RS02605 () | 485598..485819 | - | 222 | WP_000560209.1 | killing protein KilR | - |
| F7D04_RS02610 () | 486240..486392 | - | 153 | WP_052318200.1 | DUF1391 family protein | - |
| F7D04_RS02615 () | 486774..487238 | - | 465 | WP_042973012.1 | helix-turn-helix domain-containing protein | - |
| F7D04_RS02620 () | 487343..487618 | + | 276 | WP_000171139.1 | helix-turn-helix domain-containing protein | - |
| F7D04_RS02625 () | 487602..488024 | + | 423 | WP_045174332.1 | hypothetical protein | - |
| F7D04_RS02630 () | 488102..488890 | + | 789 | WP_010358686.1 | hypothetical protein | - |
| F7D04_RS02635 () | 488897..489643 | + | 747 | WP_042972910.1 | ATP-binding protein | - |
| F7D04_RS02640 () | 489664..490425 | + | 762 | WP_042972909.1 | DUF1627 domain-containing protein | - |
| F7D04_RS02645 () | 490441..490863 | + | 423 | WP_042972908.1 | DUF977 family protein | - |
| F7D04_RS02650 () | 490860..491114 | + | 255 | WP_151039310.1 | hypothetical protein | - |
| F7D04_RS02655 () | 491107..491418 | + | 312 | WP_042972904.1 | hypothetical protein | - |
| F7D04_RS02660 () | 491549..491947 | + | 399 | Protein_523 | hypothetical protein | - |
| F7D04_RS02665 () | 492029..492253 | + | 225 | Protein_524 | DUF551 domain-containing protein | - |
| F7D04_RS02670 () | 492487..492699 | + | 213 | WP_000018421.1 | type I toxin-antitoxin system Hok family toxin | - |
| F7D04_RS02675 () | 492920..493093 | + | 174 | WP_000687438.1 | hypothetical protein | - |
| F7D04_RS02680 () | 493153..493752 | + | 600 | WP_045174340.1 | DUF1367 family protein | - |
| F7D04_RS02685 () | 493752..494042 | + | 291 | WP_045174342.1 | DUF1364 domain-containing protein | - |
| F7D04_RS02690 () | 494039..494581 | + | 543 | WP_045174344.1 | DUF1133 family protein | - |
| F7D04_RS02695 () | 495035..495748 | + | 714 | WP_001285363.1 | hypothetical protein | - |
| F7D04_RS02715 () | 497867..498259 | + | 393 | WP_151039312.1 | holin | - |
| F7D04_RS02720 () | 498249..498524 | + | 276 | WP_000016408.1 | phage holin family protein | - |
| F7D04_RS02725 () | 498527..498904 | + | 378 | WP_000014549.1 | M15 family metallopeptidase | - |
| F7D04_RS02730 () | 498919..499101 | + | 183 | WP_000087514.1 | hypothetical protein | - |
| F7D04_RS02735 () | 499506..500297 | + | 792 | WP_045174350.1 | ParB/Srx family N-terminal domain-containing protein | - |
| F7D04_RS02740 () | 500290..501222 | + | 933 | WP_045174352.1 | hypothetical protein | - |
| F7D04_RS02745 () | 501158..501409 | + | 252 | WP_170815536.1 | hypothetical protein | - |
| F7D04_RS02750 () | 501413..502504 | + | 1092 | WP_151039314.1 | terminase small subunit | - |
| F7D04_RS02755 () | 502494..503822 | + | 1329 | WP_061354756.1 | terminase | - |
| F7D04_RS02760 () | 503841..505277 | + | 1437 | WP_001559065.1 | DUF1073 domain-containing protein | - |
| F7D04_RS02765 () | 505222..506055 | + | 834 | WP_045174362.1 | hypothetical protein | - |
| F7D04_RS02770 () | 506036..507358 | + | 1323 | WP_042972883.1 | DUF2213 domain-containing protein | - |
| F7D04_RS02775 () | 507351..507968 | + | 618 | WP_042972882.1 | hypothetical protein | - |
| F7D04_RS02780 () | 507983..509011 | + | 1029 | WP_001272364.1 | hypothetical protein | - |
| F7D04_RS02785 () | 509069..509539 | + | 471 | WP_000780862.1 | hypothetical protein | - |
| F7D04_RS02790 () | 509539..509979 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| F7D04_RS02795 () | 509976..510417 | + | 442 | Protein_547 | hypothetical protein | - |
| F7D04_RS02800 () | 510404..511348 | + | 945 | WP_042972881.1 | hypothetical protein | - |
| F7D04_RS02805 () | 511348..512685 | + | 1338 | WP_042972877.1 | hypothetical protein | - |
| F7D04_RS02810 () | 512709..513140 | + | 432 | WP_042972875.1 | hypothetical protein | - |
| F7D04_RS02815 () | 513137..513754 | + | 618 | WP_042972873.1 | hypothetical protein | - |
| F7D04_RS02820 () | 513819..515894 | + | 2076 | WP_151039316.1 | lytic transglycosylase domain-containing protein | - |
| F7D04_RS02825 () | 515898..516566 | + | 669 | WP_000056327.1 | hypothetical protein | - |
| F7D04_RS02830 () | 516563..516829 | + | 267 | WP_000209263.1 | hypothetical protein | - |
| F7D04_RS02835 () | 516829..517836 | + | 1008 | WP_001271166.1 | hypothetical protein | - |
| F7D04_RS02840 () | 517836..518549 | + | 714 | WP_000063620.1 | phage baseplate protein | - |
| F7D04_RS02845 () | 518832..519179 | + | 348 | WP_001261327.1 | hypothetical protein | - |
| F7D04_RS02850 () | 519329..520489 | + | 1161 | WP_000426902.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| F7D04_RS02855 () | 520530..521756 | + | 1227 | WP_071790993.1 | baseplate J/gp47 family protein | - |
| F7D04_RS02860 () | 521740..522366 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| F7D04_RS02865 () | 522363..523916 | + | 1554 | WP_047613457.1 | hypothetical protein | - |
| F7D04_RS02870 () | 523919..524464 | + | 546 | WP_000902858.1 | tail fiber assembly protein | - |
| F7D04_RS02875 () | 524488..524843 | + | 356 | Protein_563 | prophage tail fiber N-terminal domain-containing protein | - |
| F7D04_RS02880 () | 524898..525221 | + | 324 | WP_001434761.1 | DUF4376 domain-containing protein | - |
| F7D04_RS02885 () | 525458..526129 | + | 672 | WP_001057015.1 | hypothetical protein | - |
| F7D04_RS02890 () | 526126..527232 | + | 1107 | WP_151039318.1 | XRE family transcriptional regulator | - |
| F7D04_RS02895 () | 527785..528219 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| F7D04_RS02900 () | 528360..529493 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|