NZ_CP0443113288701..3473337

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 184637 bp
Accession: NZ_CP044311        Location: 3288701..3473337         Organism: Escherichia coli strain RM13752       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F7D06_RS16250 () 3284649..3286166 - 1518 WP_061317333.1 UvrD-helicase domain-containing protein -
F7D06_RS16255 () 3286773..3287417 - 645 WP_040089481.1 hypothetical protein -
F7D06_RS16260 () 3287438..3287752 - 315 WP_151039364.1 PerC family transcriptional regulator -
F7D06_RS16265 () 3287787..3288425 - 639 WP_040089482.1 ParB N-terminal domain-containing protein -
F7D06_RS16270 () 3288410..3289642 - 1233 WP_040089483.1 phosphoadenosine phosphosulfate reductase -
F7D06_RS16275 () 3289783..3290427 - 645 WP_170989474.1 hypothetical protein -
F7D06_RS16280 () 3290544..3291694 - 1151 Protein_3181 hypothetical protein VF
F7D06_RS16285 () 3292120..3293865 - 1746 WP_122992006.1 NERD domain-containing protein -
F7D06_RS16290 () 3294043..3294591 - 549 WP_072278218.1 Outer membrane protein X VF
F7D06_RS16295 () 3295559..3296497 - 939 Protein_3184 VENN motif pre-toxin domain-containing protein -
F7D06_RS16300 () 3296632..3296889 - 258 WP_040089554.1 hypothetical protein -
F7D06_RS16305 () 3296886..3305864 - 8979 WP_151039366.1 16S rRNA endonuclease CdiA VF
F7D06_RS16310 () 3305880..3306407 - 528 WP_001243916.1 Leukotoxin-activating lysine-acyltransferase LtxC VF
F7D06_RS16315 () 3306417..3308069 - 1653 WP_061341861.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
F7D06_RS16320 () 3308746..3308970 + 225 WP_032152656.1 DUF4222 domain-containing protein -
F7D06_RS16325 () 3308979..3309212 - 234 WP_021580257.1 hypothetical protein -
F7D06_RS16330 () 3309299..3309922 - 624 WP_050940555.1 hypothetical protein -
F7D06_RS16335 () 3310534..3310677 + 144 WP_157839846.1 hypothetical protein -
F7D06_RS16340 () 3310797..3311309 + 513 WP_040089161.1 ProQ/FinO family protein -
F7D06_RS16345 () 3311485..3311664 - 180 Protein_3194 transposase domain-containing protein -
F7D06_RS16350 () 3312143..3312735 - 593 Protein_3195 porin -
F7D06_RS16355 () 3313309..3313920 + 612 WP_021580263.1 YfdX family protein -
F7D06_RS16360 () 3314126..3315736 - 1611 WP_151039456.1 ISL3 family transposase ISEc38 Transposase
F7D06_RS16365 () 3315817..3316839 + 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
F7D06_RS16370 () 3316839..3317618 + 780 WP_001323403.1 IS21 family transposase IS100kyp Transposase
F7D06_RS16375 () 3318080..3318871 + 792 WP_040089475.1 hypothetical protein -
F7D06_RS16380 () 3319224..3319457 + 234 WP_077820601.1 AlpA family transcriptional regulator -
F7D06_RS16385 () 3319543..3320115 + 573 WP_050940575.1 hypothetical protein -
F7D06_RS16390 () 3320290..3320435 + 146 Protein_3203 IS1 family transposase -
F7D06_RS16395 () 3321605..3322624 + 1020 WP_050940578.1 transcriptional regulator -
F7D06_RS16400 () 3322734..3323606 + 873 WP_050940580.1 GTPase family protein -
F7D06_RS16405 () 3323979..3326828 + 2850 WP_151039368.1 calcium-binding autotransporter Cah -
F7D06_RS16410 () 3326949..3329465 + 2517 WP_050940602.1 hypothetical protein -
F7D06_RS16415 () 3329541..3329996 + 456 WP_000581504.1 hypothetical protein -
F7D06_RS16420 () 3330075..3330308 + 234 WP_001119729.1 DUF905 family protein -
F7D06_RS16425 () 3330408..3331226 + 819 WP_001234620.1 DUF945 domain-containing protein -
F7D06_RS16430 () 3331281..3331766 + 486 WP_050938918.1 antirestriction protein -
F7D06_RS16435 () 3331782..3332258 + 477 WP_001186727.1 RadC family protein -
F7D06_RS16440 () 3332321..3332542 + 222 WP_050938919.1 DUF987 domain-containing protein -
F7D06_RS16445 () 3332705..3333073 + 369 WP_001339471.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
F7D06_RS16450 () 3333163..3333540 + 378 WP_050938921.1 TA system toxin CbtA family protein Toxin Detail
F7D06_RS16455 () 3333537..3334025 + 489 WP_000761721.1 hypothetical protein -
F7D06_RS16460 () 3334037..3334234 + 198 WP_000839281.1 DUF957 domain-containing protein -
F7D06_RS16465 () 3334331..3334903 + 573 WP_001290246.1 DUF4942 domain-containing protein -
F7D06_RS16470 () 3335184..3335720 - 537 WP_000942795.1 Type II secretion system protein M VF
F7D06_RS16475 () 3335722..3336900 - 1179 WP_000094974.1 Type II secretion system protein L VF
F7D06_RS16480 () 3336897..3337874 - 978 WP_000633238.1 Putative type II secretion system protein K VF
F7D06_RS16485 () 3337877..3338476 - 600 WP_064760790.1 Type II secretion system protein J VF
F7D06_RS16490 () 3338473..3338844 - 372 WP_000820125.1 Type II secretion system protein I VF
F7D06_RS16495 () 3338841..3339404 - 564 WP_001115139.1 Type II secretion system protein H VF
F7D06_RS16500 () 3339408..3339863 - 456 WP_001087296.1 Type II secretion system protein G VF
F7D06_RS16505 () 3339880..3341103 - 1224 WP_001173448.1 Type II secretion system protein F VF
F7D06_RS16510 () 3341103..3341420 - 318 Protein_3227 Type II secretion system protein E VF
F7D06_RS16515 () 3341613..3342116 - 504 WP_040100330.1 hypothetical protein -
F7D06_RS16520 () 3342235..3342939 - 705 WP_040100331.1 hypothetical protein -
F7D06_RS16525 () 3342890..3343075 - 186 WP_001372435.1 Com family DNA-binding transcriptional regulator -
F7D06_RS16530 () 3343195..3343761 - 567 WP_040100333.1 DUF4376 domain-containing protein -
F7D06_RS16535 () 3345818..3346366 - 549 Protein_3232 prophage tail fiber N-terminal domain-containing protein -
F7D06_RS16540 () 3346353..3346883 - 531 WP_052924219.1 tail fiber assembly protein -
F7D06_RS16545 () 3346898..3347416 - 519 WP_077793277.1 hypothetical protein -
F7D06_RS16550 () 3347519..3347893 - 375 Protein_3235 phage tail protein -
F7D06_RS16555 () 3347897..3348481 - 585 WP_040100337.1 DUF2313 domain-containing protein -
F7D06_RS16560 () 3348466..3349542 - 1077 WP_040100339.1 baseplate J/gp47 family protein -
F7D06_RS16565 () 3349532..3349984 - 453 WP_040100341.1 phage GP46 family protein -
F7D06_RS16570 () 3349981..3350517 - 537 WP_000523890.1 phage baseplate assembly protein V -
F7D06_RS16575 () 3350508..3351578 - 1071 WP_052924218.1 phage tail protein -
F7D06_RS16580 () 3351578..3352852 - 1275 WP_052924217.1 DNA circularization N-terminal domain-containing protein -
F7D06_RS16585 () 3352852..3354645 - 1794 WP_052924216.1 phage tail protein -
F7D06_RS16590 () 3354632..3354769 - 138 WP_001127483.1 hypothetical protein -
F7D06_RS16595 () 3354732..3355127 - 396 WP_052924215.1 phage tail assembly protein -
F7D06_RS16600 () 3355129..3355485 - 357 WP_001062748.1 phage tail tube protein -
F7D06_RS16605 () 3355495..3356970 - 1476 WP_040100351.1 phage tail sheath subtilisin-like domain-containing protein -
F7D06_RS16610 () 3356970..3357155 - 186 WP_052924214.1 DUF2635 domain-containing protein -
F7D06_RS16615 () 3357136..3357747 - 612 WP_052924213.1 hypothetical protein -
F7D06_RS16620 () 3357744..3358286 - 543 WP_000513058.1 phage virion morphogenesis protein -
F7D06_RS16625 () 3358286..3358723 - 438 WP_000540583.1 DUF1320 domain-containing protein -
F7D06_RS16630 () 3358723..3359034 - 312 WP_001290368.1 hypothetical protein -
F7D06_RS16635 () 3359113..3360015 - 903 WP_052924212.1 Mu-like prophage major head subunit gpT family protein -
F7D06_RS16640 () 3360015..3360977 - 963 WP_052924211.1 peptidase -
F7D06_RS16645 () 3361191..3361955 - 765 WP_052924210.1 hypothetical protein -
F7D06_RS16650 () 3361948..3363519 - 1572 WP_052924209.1 DUF935 domain-containing protein -
F7D06_RS16655 () 3363516..3365042 - 1527 WP_112793722.1 terminase family protein -
F7D06_RS16660 () 3365048..3365629 - 582 WP_052924208.1 DUF3486 family protein -
F7D06_RS16665 () 3365619..3365777 - 159 WP_001080359.1 hypothetical protein -
F7D06_RS16670 () 3365767..3366066 - 300 WP_040100367.1 hypothetical protein -
F7D06_RS16675 () 3366069..3366356 - 288 WP_024168521.1 hypothetical protein -
F7D06_RS16680 () 3366362..3366667 - 306 WP_001557437.1 DUF2730 family protein -
F7D06_RS16685 () 3366652..3366879 - 228 WP_052924207.1 TraR/DksA C4-type zinc finger protein -
F7D06_RS16690 () 3366876..3367484 - 609 WP_000371427.1 hypothetical protein -
F7D06_RS16695 () 3367472..3367882 - 411 WP_052924206.1 hypothetical protein -
F7D06_RS16700 () 3367870..3368094 - 225 WP_151039370.1 hypothetical protein -
F7D06_RS16705 () 3368096..3368692 - 597 WP_040100373.1 N-acetylmuramidase -
F7D06_RS16710 () 3368778..3369227 - 450 WP_040100375.1 Middle operon regulator -
F7D06_RS16715 () 3369224..3369775 - 552 WP_040100376.1 regulatory protein GemA -
F7D06_RS16720 () 3369753..3370142 - 390 WP_040100378.1 hypothetical protein -
F7D06_RS16725 () 3370135..3370317 - 183 WP_040100379.1 hypothetical protein -
F7D06_RS16730 () 3370310..3370852 - 543 WP_151039372.1 hypothetical protein -
F7D06_RS16735 () 3370952..3371476 - 525 WP_001107927.1 host-nuclease inhibitor Gam family protein -
F7D06_RS16740 () 3371497..3371784 - 288 WP_040100384.1 hypothetical protein -
F7D06_RS16745 () 3371804..3372073 - 270 WP_001151278.1 hypothetical protein -
F7D06_RS16750 () 3372106..3372333 - 228 WP_000987801.1 hypothetical protein -
F7D06_RS16755 () 3372347..3373285 - 939 WP_001026713.1 AAA family ATPase -
F7D06_RS16760 () 3373324..3375312 - 1989 WP_040100386.1 Mu transposase C-terminal domain-containing protein -
F7D06_RS16765 () 3375320..3375541 - 222 WP_001473846.1 helix-turn-helix domain-containing protein -
F7D06_RS16770 () 3375729..3376253 + 525 WP_040100388.1 hypothetical protein -
F7D06_RS16775 () 3376583..3377755 - 1173 Protein_3280 Type II secretion system protein E VF
F7D06_RS16780 () 3377755..3379815 - 2061 WP_000498836.1 Type II secretion system protein D VF
F7D06_RS16785 () 3379845..3380804 - 960 WP_050938923.1 Type II secretion system protein C VF
F7D06_RS16790 () 3380822..3381232 - 411 WP_001324279.1 type II secretion system pilot lipoprotein GspS-beta -
F7D06_RS16795 () 3381298..3382107 - 810 WP_001297673.1 Leader peptidase PppA VF
F7D06_RS16800 () 3382255..3386817 - 4563 WP_001034492.1 hypothetical protein VF
F7D06_RS16805 () 3387302..3388984 - 1683 WP_000259303.1 glycolate permease GlcA -
F7D06_RS16810 () 3389340..3391511 - 2172 WP_000084065.1 malate synthase G -
F7D06_RS16815 () 3391533..3391937 - 405 WP_000853256.1 protein GlcG -
F7D06_RS16820 () 3391942..3393165 - 1224 WP_050938924.1 glycolate oxidase subunit GlcF -
F7D06_RS16825 () 3393176..3394228 - 1053 WP_000943057.1 glycolate oxidase subunit GlcE -
F7D06_RS16830 () 3394228..3395727 - 1500 WP_000026117.1 glycolate oxidase subunit GlcD -
F7D06_RS16835 () 3395978..3396742 + 765 WP_001297764.1 transcriptional regulator GlcC -
F7D06_RS16840 () 3396749..3397891 - 1143 WP_000388786.1 DNA-binding protein -
F7D06_RS16845 () 3398253..3399983 + 1731 WP_000262905.1 Putative ligase VF
F7D06_RS16850 () 3399980..3400894 + 915 WP_001077137.1 NAD-dependent epimerase/dehydratase family protein -
F7D06_RS16855 () 3400926..3401174 + 249 WP_000248097.1 acyl carrier protein -
F7D06_RS16860 () 3401174..3402346 + 1173 WP_032264095.1 8-amino-7-oxononanoate synthase VF
F7D06_RS16865 () 3402381..3403460 - 1080 WP_088539159.1 LPS export ABC transporter permease LptG -
F7D06_RS16870 () 3403457..3404527 - 1071 WP_000779644.1 LPS export ABC transporter permease LptF -
F7D06_RS16875 () 3404558..3405118 - 561 WP_001298770.1 YtfJ family protein -
F7D06_RS16880 () 3405130..3405954 - 825 WP_000984977.1 hypothetical protein -
F7D06_RS16885 () 3405954..3407303 - 1350 WP_000896880.1 lipopolysaccharide biosynthesis protein -
F7D06_RS16890 () 3407349..3408107 - 759 WP_000339531.1 ATP-binding protein -
F7D06_RS16895 () 3408139..3408852 - 714 WP_001076228.1 thymidylate kinase -
F7D06_RS16900 () 3409026..3409718 + 693 WP_001190781.1 thymidylate kinase -
F7D06_RS16905 () 3409767..3411266 - 1500 WP_000933261.1 inorganic phosphate transporter PitB -
F7D06_RS16910 () 3411558..3413417 - 1860 WP_151039374.1 bifunctional glutathionylspermidine amidase/synthase -
F7D06_RS16915 () 3413622..3414488 + 867 WP_001298746.1 glutathione-dependent disulfide-bond oxidoreductase -
F7D06_RS16920 () 3414835..3415815 + 981 WP_000399648.1 IS110 family transposase IS621 Transposase
F7D06_RS16925 () 3415937..3416185 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
F7D06_RS16930 () 3416198..3416539 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
F7D06_RS16935 () 3416532..3417020 - 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
F7D06_RS16940 () 3417013..3417507 - 495 WP_001221953.1 HyaD/HybD family hydrogenase maturation endopeptidase -
F7D06_RS16945 () 3417507..3419210 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
F7D06_RS16950 () 3419207..3420385 - 1179 WP_000017680.1 Ni/Fe-hydrogenase cytochrome b subunit -
F7D06_RS16955 () 3420375..3421361 - 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
F7D06_RS16960 () 3421364..3422482 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
F7D06_RS16965 () 3422671..3422958 - 288 WP_001059136.1 DUF2623 domain-containing protein -
F7D06_RS16970 () 3423077..3423964 - 888 WP_001137768.1 dienelactone hydrolase family protein -
F7D06_RS16975 () 3424121..3425161 + 1041 WP_000262150.1 L-glyceraldehyde 3-phosphate reductase -
F7D06_RS16980 () 3425201..3425695 - 495 WP_000439331.1 TIGR00645 family protein -
F7D06_RS16985 () 3425886..3426770 + 885 WP_000018758.1 putative oxidoreductase YghA VF
F7D06_RS16990 () 3427042..3427467 - 426 WP_001240712.1 TonB system transport protein ExbD -
F7D06_RS16995 () 3427474..3428208 - 735 WP_050938916.1 tol-pal system-associated acyl-CoA thioesterase -
F7D06_RS17000 () 3428460..3429647 + 1188 WP_001320425.1 cystathionine beta-lyase -
F7D06_RS17005 () 3429787..3430446 + 660 WP_000268419.1 DedA family protein -
F7D06_RS17010 () 3430486..3431442 - 957 WP_001389279.1 DNA-binding transcriptional regulator YqhC -
F7D06_RS17015 () 3431579..3432742 + 1164 WP_001058802.1 alcohol dehydrogenase -
F7D06_RS17020 () 3432847..3433674 + 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
F7D06_RS17025 () 3433874..3434800 + 927 WP_021534538.1 YbjP/YqhG family protein -
F7D06_RS17030 () 3434849..3435106 + 258 WP_000848536.1 lipoprotein YqhH -
F7D06_RS17035 () 3435149..3437368 - 2220 WP_000095187.1 YgiQ family radical SAM protein -
F7D06_RS17040 () 3437479..3438891 - 1413 WP_000059395.1 cell division protein FtsP -
F7D06_RS17045 () 3438966..3439703 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
F7D06_RS17050 () 3439936..3442194 - 2259 WP_001281881.1 DNA topoisomerase IV subunit A -
F7D06_RS17055 () 3442740..3443222 - 483 WP_000183481.1 GyrI-like domain-containing protein -
F7D06_RS17060 () 3443275..3443667 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
F7D06_RS17065 () 3443819..3444478 + 660 WP_001221502.1 Transcriptional regulatory protein QseB VF
F7D06_RS17070 () 3444475..3445824 + 1350 WP_000673354.1 two-component system sensor histidine kinase QseC -
F7D06_RS17075 () 3445870..3446202 - 333 WP_000912120.1 DUF2645 family protein -
F7D06_RS17080 () 3446521..3447102 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
F7D06_RS17085 () 3447133..3447447 + 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
F7D06_RS17090 () 3447495..3449387 - 1893 WP_038976822.1 DNA topoisomerase IV subunit B -
F7D06_RS17095 () 3449416..3449997 - 582 WP_000105733.1 esterase YqiA -
F7D06_RS17100 () 3449997..3450824 - 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
F7D06_RS17105 () 3450849..3451271 - 423 WP_000833393.1 DUF1249 family protein -
F7D06_RS17110 () 3451272..3451901 - 630 WP_151039376.1 ADP-ribose diphosphatase -
F7D06_RS17115 () 3452106..3453587 + 1482 WP_050938914.1 outer membrane channel protein TolC -
F7D06_RS17120 () 3453735..3454406 + 672 WP_000831543.1 DUF1190 family protein -
F7D06_RS17125 () 3454412..3455572 + 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
F7D06_RS17130 () 3455610..3456398 - 789 WP_001356237.1 4,5-DOPA dioxygenase extradiol -
F7D06_RS17135 () 3456541..3457314 + 774 WP_001295627.1 zinc transporter ZupT -
F7D06_RS17140 () 3457372..3457542 - 171 WP_000469266.1 hypothetical protein -
F7D06_RS17145 () 3457803..3458456 - 654 WP_001076986.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
F7D06_RS17150 () 3458830..3459120 + 291 WP_001297598.1 IS1182 family transposase ISBusp4 Transposase
F7D06_RS17155 () 3459403..3459954 + 552 WP_001272149.1 putative fimbrial-like protein YbgD VF
F7D06_RS17160 () 3460014..3462518 + 2505 WP_000277119.1 Outer membrane usher protein PapC VF
F7D06_RS17165 () 3462534..3463283 + 750 WP_001269825.1 Chaperone protein PapD VF
F7D06_RS17170 () 3463285..3464349 + 1065 WP_001269793.1 fimbrial protein -
F7D06_RS17175 () 3464392..3464592 - 201 WP_000350095.1 cell surface composition regulator GlgS -
F7D06_RS17180 () 3464861..3465490 + 630 WP_000599947.1 DUF1449 family protein -
F7D06_RS17185 () 3465517..3467178 + 1662 WP_000341046.1 flotillin family protein -
- () 3467375..3467516 - 142 NuclAT_2 - -
- () 3467375..3467516 - 142 NuclAT_2 - -
- () 3467375..3467516 - 142 NuclAT_2 - -
- () 3467375..3467516 - 142 NuclAT_2 - -
- () 3467375..3467516 - 142 NuclAT_6 - -
- () 3467375..3467516 - 142 NuclAT_6 - -
- () 3467375..3467516 - 142 NuclAT_6 - -
- () 3467375..3467516 - 142 NuclAT_6 - -
F7D06_RS17190 () 3467417..3467476 + 60 WP_100249846.1 type I toxin-antitoxin system Ibs family toxin -
- () 3467751..3467892 - 142 NuclAT_5 - -
- () 3467751..3467892 - 142 NuclAT_5 - -
- () 3467751..3467892 - 142 NuclAT_5 - -
- () 3467751..3467892 - 142 NuclAT_5 - -
F7D06_RS17195 () 3467793..3467852 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
F7D06_RS17200 () 3467972..3469405 - 1434 WP_000869178.1 Bifunctional protein HldE VF
F7D06_RS17205 () 3469453..3472293 - 2841 WP_001324258.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
F7D06_RS17210 () 3472316..3473617 - 1302 WP_000046281.1 inorganic triphosphatase -
F7D06_RS17215 () 3473859..3474479 + 621 WP_001125331.1 SH3 domain-containing protein -
F7D06_RS17220 () 3474543..3475781 + 1239 WP_050938913.1 fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca -
F7D06_RS17225 () 3475962..3476783 - 822 WP_001281927.1 undecaprenyl-diphosphate phosphatase -
F7D06_RS17230 () 3476874..3477242 - 369 WP_001295541.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase -
F7D06_RS17235 () 3477347..3477964 + 618 WP_001272796.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance