MGE detailed information
MGE type: IScluster/Tn MGE length: 37373 bp
Accession: NZ_CP044160 Location: 44954..82326 Organism: Shigella flexneri strain AR-0423 Replicon: plasmid pAR-0423-2
Accession: NZ_CP044160 Location: 44954..82326 Organism: Shigella flexneri strain AR-0423 Replicon: plasmid pAR-0423-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V35_RS24460 | 41025..42005 | + | 981 | WP_000431558.1 | ParB family protein | - |
| F4V35_RS24465 | 42261..42746 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| F4V35_RS24470 | 42773..42952 | - | 180 | Protein_59 | transposase domain-containing protein | - |
| F4V35_RS24475 | 43035..44162 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| F4V35_RS26050 | 44084..44422 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| F4V35_RS24485 | 44738..44917 | - | 180 | Protein_62 | IS66 family transposase | - |
| F4V35_RS24490 | 44954..46163 | - | 1210 | Protein_63 | IS3 family transposase | - |
| F4V35_RS24495 | 46220..46516 | - | 297 | Protein_64 | DDE-type integrase/transposase/recombinase | - |
| F4V35_RS24500 | 46632..46820 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| F4V35_RS24505 | 46830..48029 | + | 1200 | WP_000947175.1 | IS91 family transposase | - |
| F4V35_RS24510 | 48202..48956 | - | 755 | Protein_67 | helix-turn-helix domain-containing protein | - |
| F4V35_RS24515 | 48967..49326 | + | 360 | Protein_68 | ATP-binding protein | - |
| F4V35_RS24520 | 49319..50107 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| F4V35_RS24525 | 50536..50937 | + | 402 | Protein_70 | integrase core domain-containing protein | - |
| F4V35_RS24530 | 51119..51385 | + | 267 | WP_000957712.1 | type 3 secretion system effector OspE2 | - |
| F4V35_RS24535 | 51575..52272 | + | 698 | WP_227804301.1 | IS1 family transposase | - |
| F4V35_RS24540 | 52533..53729 | - | 1197 | WP_005085088.1 | IS110-like element ISSfl4 family transposase | - |
| F4V35_RS24545 | 54065..55756 | + | 1692 | WP_000597733.1 | T3SS effector E3 ubiquitin-protein ligase IpaH2.5 | - |
| F4V35_RS24550 | 55808..57016 | + | 1209 | Protein_75 | IS3 family transposase | - |
| F4V35_RS24555 | 57059..57582 | - | 524 | Protein_76 | IS3-like element ISSfl11 family transposase | - |
| F4V35_RS24560 | 57650..58132 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| F4V35_RS24565 | 58123..58425 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| F4V35_RS24575 | 58697..58969 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| F4V35_RS24580 | 58950..60158 | + | 1209 | WP_000198552.1 | IS91 family transposase | - |
| F4V35_RS24585 | 60330..60458 | + | 129 | Protein_81 | IS5/IS1182 family transposase | - |
| F4V35_RS24595 | 60607..62061 | - | 1455 | WP_000701108.1 | type 3 secretion system effector OspC2 | - |
| F4V35_RS24600 | 62465..63084 | + | 620 | Protein_83 | IS1 family transposase | - |
| F4V35_RS24605 | 63134..63869 | + | 736 | Protein_84 | IS3 family transposase | - |
| F4V35_RS24615 | 64542..66050 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| F4V35_RS24620 | 66140..66613 | + | 474 | Protein_86 | IS3 family transposase | - |
| F4V35_RS24625 | 66657..67067 | + | 411 | Protein_87 | transposase | - |
| F4V35_RS24630 | 67099..67713 | + | 615 | Protein_88 | IS21-like element ISEc10 family helper ATPase IstB | - |
| F4V35_RS24635 | 67882..71976 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| F4V35_RS24645 | 72378..72566 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| F4V35_RS24650 | 72576..73774 | + | 1199 | WP_094081567.1 | IS91 family transposase | - |
| F4V35_RS24655 | 73943..74449 | - | 507 | Protein_92 | IS3 family transposase | - |
| F4V35_RS24660 | 74512..74916 | - | 405 | WP_011114759.1 | hypothetical protein | - |
| F4V35_RS26055 | 75106..75234 | - | 129 | Protein_94 | IS630 family transposase | - |
| F4V35_RS25465 | 75468..76184 | - | 717 | WP_171768513.1 | hypothetical protein | - |
| F4V35_RS24670 | 76768..77168 | - | 401 | Protein_96 | transposase | - |
| F4V35_RS24675 | 77201..77655 | - | 455 | Protein_97 | transposase | - |
| F4V35_RS24680 | 77708..78918 | + | 1211 | Protein_98 | IS3 family transposase | - |
| F4V35_RS24690 | 78951..79100 | - | 150 | Protein_99 | transposase | - |
| F4V35_RS24695 | 79275..79704 | - | 430 | Protein_100 | transposase | - |
| F4V35_RS24700 | 79752..80117 | - | 366 | WP_000124083.1 | hypothetical protein | - |
| F4V35_RS25470 | 80870..81268 | - | 399 | Protein_102 | reverse transcriptase/maturase family protein | - |
| F4V35_RS24720 | 81271..81637 | - | 367 | Protein_103 | IS3 family transposase | - |
| F4V35_RS24725 | 81639..82326 | - | 688 | Protein_104 | IS3 family transposase | - |
| F4V35_RS24730 | 82505..83707 | - | 1203 | WP_001195004.1 | alpha-tubulin-specific protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|