MGE detailed information
MGE type: IScluster/Tn MGE length: 36200 bp
Accession: NZ_CP044157 Location: 188826..225025 Organism: Shigella flexneri strain AR-0424 Replicon: plasmid pAR-0424-2
Accession: NZ_CP044157 Location: 188826..225025 Organism: Shigella flexneri strain AR-0424 Replicon: plasmid pAR-0424-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V36_RS25230 | 184366..184602 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| F4V36_RS25235 | 184819..185748 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| F4V36_RS25240 | 186694..187473 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| F4V36_RS26395 | 187670..188479 | - | 810 | Protein_225 | IS110 family transposase | - |
| F4V36_RS25245 | 188826..189830 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| F4V36_RS25250 | 190022..191218 | + | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| F4V36_RS25255 | 191268..192105 | - | 838 | Protein_228 | IS21 family transposase ISEc62 | Transposase |
| F4V36_RS26400 | 192088..192429 | - | 342 | Protein_229 | IS21 family transposase ISEc62 | Transposase |
| F4V36_RS26405 | 192544..193346 | - | 803 | Protein_230 | IS3 family transposase ISKpn38 | Transposase |
| F4V36_RS25275 | 193387..194451 | - | 1065 | Protein_231 | IS3 family transposase IS600 | Transposase |
| F4V36_RS25285 | 194789..196243 | - | 1455 | WP_015683184.1 | hypothetical protein | VF |
| F4V36_RS25290 | 196815..197489 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS25295 | 197486..197836 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS25300 | 197833..199434 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS25810 | 199688..199852 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| F4V36_RS25325 | 200754..201038 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| F4V36_RS25330 | 201026..201511 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| F4V36_RS25335 | 201684..201965 | - | 282 | Protein_239 | IS4 family transposase ISSfl1 | Transposase |
| F4V36_RS25340 | 202032..203188 | + | 1157 | WP_094085527.1 | IS3 family transposase IS600 | Transposase |
| F4V36_RS25345 | 203258..204531 | + | 1274 | WP_094081497.1 | IS3 family transposase IS2 | Transposase |
| F4V36_RS25350 | 204569..204712 | + | 144 | Protein_242 | DUF3440 domain-containing protein | - |
| F4V36_RS25355 | 204697..205335 | + | 639 | WP_039065741.1 | ParB N-terminal domain-containing protein | - |
| F4V36_RS25360 | 205563..205987 | + | 425 | Protein_244 | hypothetical protein | - |
| F4V36_RS25365 | 205982..207178 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| F4V36_RS25370 | 207429..207902 | + | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| F4V36_RS25375 | 207991..208856 | + | 866 | WP_094085526.1 | IS5 family transposase ISSfl7 | Transposase |
| F4V36_RS25380 | 209106..209299 | + | 194 | Protein_248 | HNH endonuclease | - |
| F4V36_RS25385 | 209442..209663 | + | 222 | Protein_249 | IS66 family transposase ISCro1 | Transposase |
| F4V36_RS25390 | 209684..209746 | - | 63 | Protein_250 | IS66 family transposase ISCro1 | Transposase |
| F4V36_RS25395 | 210196..211608 | + | 1413 | WP_001026857.1 | hypothetical protein | VF |
| F4V36_RS25400 | 211712..211861 | - | 150 | Protein_252 | IS1 family transposase | - |
| F4V36_RS25405 | 211937..213632 | + | 1696 | Protein_253 | type III secretion system effector OspD3 | - |
| F4V36_RS25415 | 213749..213868 | + | 120 | Protein_254 | IS66 family transposase ISCro1 | Transposase |
| F4V36_RS25425 | 214035..214307 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| F4V36_RS25430 | 214288..215496 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| F4V36_RS25435 | 215872..216606 | - | 735 | Protein_257 | IS21 family transposase IS100kyp | Transposase |
| F4V36_RS25440 | 216786..217521 | + | 736 | Protein_258 | IS3 family transposase | - |
| F4V36_RS25450 | 218194..219702 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| F4V36_RS25455 | 219792..220264 | + | 473 | Protein_260 | IS3 family transposase IS629 | Transposase |
| F4V36_RS25465 | 220367..220864 | + | 498 | Protein_261 | IS66 family transposase ISEc47 | Transposase |
| F4V36_RS25470 | 220905..221096 | + | 192 | Protein_262 | IS21 family transposase IS100 | Transposase |
| F4V36_RS25475 | 221190..221399 | - | 210 | Protein_263 | peptidoglycan-binding protein | - |
| F4V36_RS25480 | 221449..222813 | - | 1365 | WP_000051931.1 | MFS transporter | - |
| F4V36_RS25485 | 223011..223217 | - | 207 | WP_014526562.1 | S-type pyocin domain protein | - |
| F4V36_RS25815 | 223561..223773 | + | 213 | Protein_266 | DDE-type integrase/transposase/recombinase | - |
| F4V36_RS25495 | 223817..225025 | - | 1209 | Protein_267 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|