MGE detailed information
MGE type: Prophage MGE length: 19672 bp
Accession: NZ_CP044155 Location: 4432215..4451886 Organism: Shigella flexneri strain AR-0424 Replicon: chromosome
Accession: NZ_CP044155 Location: 4432215..4451886 Organism: Shigella flexneri strain AR-0424 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V36_RS22500 (4428058) | 4428058..4428822 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| F4V36_RS22505 (4429141) | 4429141..4429620 | + | 480 | Protein_4309 | cupin domain-containing protein | - |
| F4V36_RS22510 (4429675) | 4429675..4430372 | + | 698 | WP_227804325.1 | IS1 family transposase | - |
| F4V36_RS22515 (4430366) | 4430366..4430533 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| F4V36_RS22520 (4430935) | 4430935..4431696 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| F4V36_RS22525 (4431764) | 4431764..4431967 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| F4V36_RS22530 (4432215) | 4432215..4434494 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| F4V36_RS22535 (4434828) | 4434828..4435577 | - | 750 | Protein_4315 | Type 1 fimbrin D-mannose specific adhesin | VF |
| F4V36_RS22540 (4435633) | 4435633..4436330 | + | 698 | WP_227804319.1 | IS1 family transposase IS1X2 | Transposase |
| F4V36_RS22545 (4436348) | 4436348..4437226 | + | 879 | Protein_4317 | IS3 family transposase ISSd1 | Transposase |
| F4V36_RS22550 (4437251) | 4437251..4437430 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| F4V36_RS25720 (4437580) | 4437580..4437741 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| F4V36_RS22555 (4437741) | 4437741..4437926 | - | 186 | Protein_4320 | DUF1737 domain-containing protein | - |
| F4V36_RS22560 (4438186) | 4438186..4438521 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| F4V36_RS22565 (4438802) | 4438802..4438910 | - | 109 | Protein_4322 | DUF3927 family protein | - |
| F4V36_RS22585 (4439831) | 4439831..4440652 | - | 822 | WP_000762882.1 | antitermination protein | - |
| F4V36_RS22590 (4440667) | 4440667..4441023 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V36_RS22595 (4441036) | 4441036..4442085 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| F4V36_RS22600 (4442087) | 4442087..4442365 | - | 279 | Protein_4326 | hypothetical protein | - |
| F4V36_RS22605 (4442432) | 4442432..4442683 | - | 252 | WP_000980987.1 | protein Rem | - |
| F4V36_RS22610 (4442901) | 4442901..4443056 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| F4V36_RS22615 (4443128) | 4443128..4443415 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| F4V36_RS22620 (4443415) | 4443415..4443654 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| F4V36_RS22625 (4443679) | 4443679..4443984 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| F4V36_RS22630 (4443981) | 4443981..4445137 | - | 1157 | Protein_4332 | IS3 family transposase IS600 | Transposase |
| F4V36_RS22635 (4445199) | 4445199..4446218 | + | 1020 | Protein_4333 | MHS family MFS transporter YdfJ | - |
| F4V36_RS22640 (4446307) | 4446307..4447767 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| F4V36_RS22645 (4447803) | 4447803..4448006 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| F4V36_RS22650 (4448183) | 4448183..4448869 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| F4V36_RS22655 (4448958) | 4448958..4449704 | - | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| F4V36_RS22660 (4449841) | 4449841..4451886 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| F4V36_RS22665 (4451931) | 4451931..4452449 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| F4V36_RS22670 (4452725) | 4452725..4452949 | + | 225 | Protein_4340 | YdeI family stress tolerance OB fold protein | - |
| F4V36_RS22675 (4453015) | 4453015..4454171 | + | 1157 | Protein_4341 | IS3 family transposase | - |
| F4V36_RS26305 (4454316) | 4454316..4454419 | - | 104 | Protein_4342 | protein MgtT | - |
| F4V36_RS22680 (4454419) | 4454419..4454514 | - | 96 | WP_000901367.1 | protein MgtS | - |
| F4V36_RS22685 (4454641) | 4454641..4455759 | - | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| F4V36_RS26310 (4455817) | 4455817..4455897 | + | 81 | Protein_4345 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|