MGE detailed information
MGE type: Prophage MGE length: 22609 bp
Accession: NZ_CP044155 Location: 306935..329543 Organism: Shigella flexneri strain AR-0424 Replicon: chromosome
Accession: NZ_CP044155 Location: 306935..329543 Organism: Shigella flexneri strain AR-0424 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V36_RS01660 () | 302074..302724 | + | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| F4V36_RS01670 () | 303802..304071 | - | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| F4V36_RS01675 () | 304128..304796 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| F4V36_RS01680 () | 305112..306755 | + | 1644 | WP_014532281.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4/H7 | - |
| F4V36_RS01690 () | 306935..307414 | - | 480 | Protein_321 | DUF4376 domain-containing protein | - |
| F4V36_RS01695 () | 307455..308312 | - | 858 | Protein_322 | IS3 family transposase IS600 | Transposase |
| F4V36_RS01700 () | 308370..309067 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| F4V36_RS01705 () | 309160..309642 | - | 483 | WP_000594909.1 | hypothetical protein | - |
| F4V36_RS01710 () | 309710..311659 | - | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| F4V36_RS01715 () | 311744..312079 | - | 336 | WP_001251340.1 | phage tail assembly protein | - |
| F4V36_RS01720 () | 312079..312435 | - | 357 | WP_001062338.1 | phage tail tube protein | - |
| F4V36_RS01725 () | 312435..313931 | - | 1497 | WP_000155743.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| F4V36_RS01730 () | 313928..314089 | - | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| F4V36_RS01735 () | 314099..314458 | - | 360 | Protein_330 | hypothetical protein | - |
| F4V36_RS01745 () | 315705..316028 | - | 324 | Protein_332 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS01755 () | 316797..317294 | - | 498 | Protein_334 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS01760 () | 317291..317641 | - | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS01765 () | 317638..318312 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| F4V36_RS01770 () | 318411..318626 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| F4V36_RS01800 () | 319422..320110 | - | 689 | Protein_338 | bacteriophage antitermination protein Q | - |
| F4V36_RS01805 () | 320107..320472 | - | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V36_RS01810 () | 320473..321531 | - | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| F4V36_RS01815 () | 321533..321811 | - | 279 | WP_011069426.1 | hypothetical protein | - |
| F4V36_RS01825 () | 321979..322134 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 322146..322204 | + | 59 | - | - | Antitoxin Detail |
| F4V36_RS01840 () | 322785..323201 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| F4V36_RS01845 () | 323228..323368 | + | 141 | Protein_344 | DUF4224 domain-containing protein | - |
| F4V36_RS01850 () | 323368..324418 | + | 1051 | Protein_345 | Tyrosine recombinase XerC ; Integrase | Integrase |
| F4V36_RS01860 () | 324629..325426 | + | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| F4V36_RS01870 () | 325764..327026 | + | 1263 | Protein_347 | putative protein kinase UbiB ; Integrase | Integrase |
| F4V36_RS01880 () | 328387..329586 | + | 1200 | Protein_349 | IS3 family transposase IS600 | Transposase |
| F4V36_RS01885 () | 329587..329793 | + | 207 | WP_000466572.1 | hypothetical protein | - |
| F4V36_RS01890 () | 329895..331349 | + | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| F4V36_RS01895 () | 331692..332408 | + | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|