MGE detailed information
MGE type: Prophage MGE length: 30140 bp
Accession: NZ_CP044152 Location: 9853..39992 Organism: Shigella flexneri strain AR-0425 Replicon: chromosome
Accession: NZ_CP044152 Location: 9853..39992 Organism: Shigella flexneri strain AR-0425 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V37_RS00035 () | 5092..5340 | - | 249 | WP_001210039.1 | DinI-like family protein | - |
| F4V37_RS25240 () | 5603..5698 | - | 96 | Protein_6 | hypothetical protein | - |
| F4V37_RS00040 () | 5695..6042 | - | 348 | Protein_7 | hydrolase | - |
| F4V37_RS00045 () | 6069..7265 | - | 1197 | WP_151090716.1 | IS110-like element ISSfl4 family transposase | - |
| F4V37_RS00050 () | 7492..7710 | - | 219 | Protein_9 | isochorismatase family protein | - |
| F4V37_RS00055 () | 8020..9792 | + | 1773 | WP_001258670.1 | aspartate--tRNA ligase | - |
| F4V37_RS00060 () | 9910..10362 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| F4V37_RS00065 () | 10391..11131 | + | 741 | WP_000907248.1 | transcriptional regulatory protein YebC | VF |
| F4V37_RS00070 () | 11166..11687 | + | 522 | WP_000974712.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F4V37_RS00075 () | 11689..12291 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| F4V37_RS00080 () | 12361..12426 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| F4V37_RS00085 () | 12565..13176 | + | 612 | WP_000580324.1 | Holliday junction branch migration protein RuvA | - |
| F4V37_RS00090 () | 13185..14195 | + | 1011 | WP_000568525.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F4V37_RS00095 () | 14342..15127 | - | 786 | WP_000571470.1 | hypothetical protein | VF |
| F4V37_RS00100 () | 15124..15879 | - | 756 | WP_000202992.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| F4V37_RS00105 () | 15958..16890 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F4V37_RS00110 () | 16906..18228 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| F4V37_RS00115 () | 18348..19319 | + | 972 | WP_000448385.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F4V37_RS00120 () | 19450..20892 | - | 1443 | WP_000044417.1 | pyruvate kinase | - |
| F4V37_RS00125 () | 21020..21889 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| F4V37_RS00130 () | 22226..23701 | + | 1476 | WP_000301736.1 | glucose-6-phosphate dehydrogenase | - |
| F4V37_RS00135 () | 23936..25747 | + | 1812 | WP_001069479.1 | phosphogluconate dehydratase | - |
| F4V37_RS00140 () | 25784..26425 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F4V37_RS00145 () | 26481..27659 | - | 1179 | WP_000173487.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F4V37_RS00150 () | 27793..28083 | + | 291 | Protein_29 | DNA damage-inducible protein YebG | - |
| F4V37_RS00155 () | 28150..28506 | + | 357 | WP_005047608.1 | protein YebF | - |
| F4V37_RS00160 () | 28833..29492 | + | 660 | WP_000024751.1 | tellurite resistance TerB family protein | - |
| F4V37_RS00165 () | 29702..31762 | + | 2061 | WP_000936980.1 | oligopeptidase B | - |
| F4V37_RS00170 () | 31759..32421 | - | 663 | WP_000944268.1 | exodeoxyribonuclease X | - |
| F4V37_RS00175 () | 32445..33101 | - | 657 | Protein_34 | carbon-nitrogen hydrolase family protein | - |
| F4V37_RS00180 () | 33203..33433 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| F4V37_RS00185 () | 33572..33946 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| F4V37_RS00190 () | 33950..34822 | + | 873 | Protein_37 | copper homeostasis membrane protein CopD | - |
| F4V37_RS00195 () | 34835..35176 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 35204..35438 | - | 235 | - | - | Antitoxin Detail |
| - | 35334..35437 | + | 104 | - | - | Toxin Detail |
| F4V37_RS25245 () | 35569..36646 | - | 1078 | Protein_39 | phage integrase Arm DNA-binding domain-containing protein | - |
| F4V37_RS00210 () | 36612..36893 | - | 282 | WP_005127484.1 | excisionase | - |
| F4V37_RS00215 () | 37010..37858 | - | 849 | Protein_41 | IS3 family transposase ISSd1 | Transposase |
| F4V37_RS00220 () | 37913..39108 | + | 1196 | Protein_42 | IS3 family transposase | - |
| F4V37_RS00225 () | 39151..39461 | - | 311 | Protein_43 | IS3 family transposase ISSfl10 | Transposase |
| F4V37_RS00230 () | 39525..39992 | + | 468 | Protein_44 | DNA-binding transcriptional regulator PgrR | - |
| F4V37_RS00235 () | 40329..41942 | + | 1614 | WP_000683016.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| F4V37_RS00240 () | 41993..43024 | - | 1032 | WP_000559908.1 | low conductance mechanosensitive channel YnaI | - |
| F4V37_RS00245 () | 43152..43516 | + | 365 | Protein_47 | transposase | - |
| F4V37_RS00250 () | 43700..44887 | - | 1188 | WP_000937573.1 | IS91 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|