MGE detailed information
MGE type: Prophage MGE length: 36112 bp
Accession: NZ_CP044151 Location: 130674..166785 Organism: Shigella sonnei strain AR-0426 Replicon: chromosome
Accession: NZ_CP044151 Location: 130674..166785 Organism: Shigella sonnei strain AR-0426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V38_RS00755 () | 126817..128628 | + | 1812 | WP_001069438.1 | phosphogluconate dehydratase | - |
| F4V38_RS00760 () | 128665..129306 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F4V38_RS00765 () | 129362..130540 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F4V38_RS00770 () | 130674..130964 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| F4V38_RS00775 () | 131031..131387 | + | 357 | WP_001295500.1 | protein YebF | - |
| F4V38_RS00780 () | 131714..132373 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| F4V38_RS00785 () | 132582..134642 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| F4V38_RS00790 () | 134639..135301 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| F4V38_RS00795 () | 135325..135981 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| F4V38_RS00800 () | 136083..136313 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| F4V38_RS00805 () | 136452..136826 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| F4V38_RS00810 () | 136830..137702 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| F4V38_RS00815 () | 137715..138056 | + | 342 | WP_151089707.1 | YebY family protein | - |
| - | 138084..138318 | - | 235 | - | - | Antitoxin Detail |
| - | 138214..138317 | + | 104 | - | - | Toxin Detail |
| F4V38_RS00820 () | 138449..139525 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| F4V38_RS00840 () | 141621..141737 | - | 117 | Protein_154 | host-nuclease inhibitor Gam family protein | - |
| F4V38_RS00845 () | 141715..142035 | - | 321 | WP_241556168.1 | exodeoxyribonuclease VIII | - |
| F4V38_RS00855 () | 142283..143439 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| F4V38_RS00870 () | 144807..146513 | - | 1707 | WP_000936825.1 | hypothetical protein | VF |
| F4V38_RS00885 () | 148531..148704 | + | 174 | Protein_160 | metallophosphoesterase | - |
| F4V38_RS00895 () | 149470..149775 | + | 306 | Protein_162 | serine/threonine-protein phosphatase | - |
| F4V38_RS00900 () | 149833..150989 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| F4V38_RS00905 () | 151031..151231 | + | 201 | Protein_164 | serine/threonine-protein phosphatase | - |
| F4V38_RS00910 () | 151232..151423 | - | 192 | WP_001296140.1 | YebW family protein | - |
| F4V38_RS00915 () | 151528..151686 | - | 159 | Protein_166 | YebV family protein | - |
| F4V38_RS00920 () | 151744..152441 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| F4V38_RS00925 () | 152458..152541 | - | 84 | Protein_168 | DUF1480 family protein | - |
| F4V38_RS00930 () | 152659..154098 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F4V38_RS00935 () | 154179..156812 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| F4V38_RS00940 () | 156781..158064 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| F4V38_RS00945 () | 158194..158691 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| F4V38_RS00950 () | 158788..159486 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| F4V38_RS00955 () | 159506..161554 | + | 2049 | WP_024261239.1 | carboxy terminal-processing peptidase | - |
| F4V38_RS00960 () | 161746..162627 | + | 882 | WP_000984517.1 | protease HtpX | - |
| F4V38_RS00965 () | 162673..163736 | - | 1064 | Protein_176 | MFS transporter | - |
| F4V38_RS00970 () | 163913..164704 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| F4V38_RS00975 () | 164847..165086 | - | 240 | WP_001211011.1 | YobH family protein | - |
| F4V38_RS00980 () | 165245..165388 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| F4V38_RS00985 () | 165463..165750 | + | 288 | WP_001006860.1 | YebO family protein | - |
| F4V38_RS00990 () | 166420..166563 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| F4V38_RS00995 () | 166576..166785 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| F4V38_RS01000 () | 166951..167760 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| F4V38_RS01005 () | 167757..168323 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| F4V38_RS01010 () | 168752..169210 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| F4V38_RS01015 () | 169265..170116 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| F4V38_RS01020 () | 170129..170929 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|