MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85887 bp
Accession: NZ_CP044150 Location: 1..85887 Organism: Escherichia coli O157 strain AR-0427 Replicon: plasmid pAR-0427-2
Accession: NZ_CP044150 Location: 1..85887 Organism: Escherichia coli O157 strain AR-0427 Replicon: plasmid pAR-0427-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V39_RS28765 () | 243..470 | - | 228 | Protein_0 | conjugal transfer protein | - |
| F4V39_RS28770 () | 522..1735 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| F4V39_RS28775 () | 1779..2117 | - | 339 | Protein_2 | fertility inhibition protein FinO | - |
| F4V39_RS28780 () | 2220..3080 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| F4V39_RS28785 () | 3139..3885 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| F4V39_RS28790 () | 3905..5293 | - | 1389 | Protein_5 | Multifunctional conjugation protein TraI | Relaxase |
| F4V39_RS28795 () | 5350..5601 | + | 252 | Protein_6 | IS3 family transposase IS1203 | Transposase |
| F4V39_RS28800 () | 5608..5778 | + | 171 | Protein_7 | IS3 family transposase IS1203 | Transposase |
| F4V39_RS28805 () | 5846..6070 | - | 225 | Protein_8 | IS3 family transposase IS3H | Transposase |
| F4V39_RS28810 () | 6144..15647 | - | 9504 | Protein_9 | toxin B | - |
| F4V39_RS28815 () | 15754..15906 | - | 153 | Protein_10 | IS1 family transposase | - |
| F4V39_RS28820 () | 15903..16023 | - | 121 | Protein_11 | IS21 family transposase ISEc62 | Transposase |
| F4V39_RS28825 () | 16063..16326 | - | 264 | Protein_12 | IS21 family transposase ISEc62 | Transposase |
| F4V39_RS28830 () | 16420..16769 | + | 350 | Protein_13 | IS3 family transposase IS3H | Transposase |
| F4V39_RS28840 () | 17292..18505 | + | 1214 | WP_191904704.1 | IS3 family transposase IS1203 | Transposase |
| F4V39_RS28845 () | 18726..19157 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| F4V39_RS28850 () | 19225..21245 | - | 2021 | Protein_16 | relaxase/mobilization nuclease domain-containing protein | - |
| F4V39_RS28855 () | 21379..21537 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 21602..21800 | - | 199 | NuclAT_0 | - | - |
| - () | 21602..21800 | - | 199 | NuclAT_0 | - | - |
| - () | 21602..21800 | - | 199 | NuclAT_0 | - | - |
| - () | 21602..21800 | - | 199 | NuclAT_0 | - | - |
| F4V39_RS28860 () | 21769..22530 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| F4V39_RS28865 () | 22527..22961 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| F4V39_RS28870 () | 23016..24974 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| F4V39_RS28875 () | 25040..25273 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| F4V39_RS28880 () | 25330..25782 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| F4V39_RS28885 () | 25808..26014 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| F4V39_RS28890 () | 26084..26557 | + | 474 | WP_032338770.1 | hypothetical protein | - |
| F4V39_RS28895 () | 26643..27206 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| F4V39_RS28900 () | 27252..28613 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| F4V39_RS28905 () | 28665..28895 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| F4V39_RS29465 () | 29412..29921 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| F4V39_RS28920 () | 29891..30082 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| F4V39_RS28925 () | 30079..30501 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| F4V39_RS28930 () | 30548..30850 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| F4V39_RS29470 () | 31391..32167 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| F4V39_RS28945 () | 32213..32767 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| F4V39_RS28950 () | 32661..32882 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| F4V39_RS28955 () | 32883..33566 | - | 684 | WP_000085945.1 | DNA methylase | - |
| F4V39_RS28960 () | 33643..33948 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| F4V39_RS28965 () | 33952..34854 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| F4V39_RS28980 () | 35549..36520 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| F4V39_RS28985 () | 36520..37686 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| F4V39_RS28995 () | 38273..38635 | - | 363 | Protein_40 | RepB family plasmid replication initiator protein | - |
| F4V39_RS29000 () | 38689..39902 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| F4V39_RS29010 () | 40625..41431 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| F4V39_RS29015 () | 41432..41737 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F4V39_RS29020 () | 41739..41957 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F4V39_RS29025 () | 42416..43099 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| F4V39_RS29030 () | 43096..43716 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| F4V39_RS29035 () | 43713..43913 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| F4V39_RS29045 () | 44320..45297 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| F4V39_RS29050 () | 45582..46322 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| F4V39_RS29055 () | 46443..46673 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| F4V39_RS29475 () | 46804..47295 | - | 492 | Protein_51 | Transcriptional repressor MprA | VF |
| F4V39_RS29075 () | 47416..48853 | - | 1438 | Protein_52 | Hemolysin secretion protein D, plasmid | VF |
| F4V39_RS29080 () | 48857..50977 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| F4V39_RS29085 () | 51027..54023 | - | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| F4V39_RS29090 () | 54025..54540 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| F4V39_RS29100 () | 55081..56252 | - | 1172 | Protein_56 | IS3 family transposase ISLad1 | Transposase |
| F4V39_RS29105 () | 56400..56831 | - | 432 | WP_151142862.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| F4V39_RS29110 () | 56923..57756 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| F4V39_RS29115 () | 57814..58326 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| F4V39_RS29120 () | 58313..59485 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| F4V39_RS29125 () | 59524..60501 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| F4V39_RS29130 () | 60498..61097 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| F4V39_RS29135 () | 61094..61441 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| F4V39_RS29140 () | 61456..62010 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| F4V39_RS29145 () | 62007..62440 | - | 434 | Protein_65 | Type II secretion system protein G | VF |
| F4V39_RS29150 () | 62471..63694 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| F4V39_RS29155 () | 63696..65201 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| F4V39_RS29160 () | 65201..67167 | - | 1967 | Protein_68 | Type II secretion system protein D | VF |
| F4V39_RS29165 () | 67168..68043 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| F4V39_RS29170 () | 68130..70826 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| F4V39_RS29180 () | 71271..71357 | + | 87 | Protein_71 | IS3 family transposase ISEhe3 | Transposase |
| F4V39_RS29185 () | 71472..73010 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| F4V39_RS29190 () | 73060..73407 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| F4V39_RS29480 () | 73404..73784 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| F4V39_RS29200 () | 73911..74099 | - | 189 | Protein_75 | hypothetical protein | - |
| F4V39_RS29205 () | 74152..75150 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F4V39_RS29210 () | 75224..76945 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| F4V39_RS29215 () | 77035..78141 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| F4V39_RS29220 () | 78141..78962 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| F4V39_RS29230 () | 80402..80883 | + | 482 | Protein_80 | IS1 family transposase IS1N | Transposase |
| F4V39_RS29235 () | 81139..85041 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| F4V39_RS29245 () | 85222..85887 | - | 666 | WP_151142865.1 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|