MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_CP044148 Location: 3670454..3689149 Organism: Escherichia coli O157 strain AR-0427 Replicon: chromosome
Accession: NZ_CP044148 Location: 3670454..3689149 Organism: Escherichia coli O157 strain AR-0427 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V39_RS18665 () | 3665623..3666801 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| F4V39_RS18670 () | 3666869..3667711 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| F4V39_RS18680 () | 3667977..3670142 | - | 2166 | WP_151142828.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| F4V39_RS18685 () | 3670454..3670720 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| F4V39_RS18690 () | 3670717..3671484 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| F4V39_RS18695 () | 3671494..3672645 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| F4V39_RS18700 () | 3672761..3674032 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| F4V39_RS18705 () | 3674073..3675305 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| F4V39_RS18710 () | 3675772..3676704 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| F4V39_RS18715 () | 3676947..3678359 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| F4V39_RS18720 () | 3678536..3678700 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| F4V39_RS18725 () | 3678797..3679678 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| F4V39_RS18730 () | 3679726..3680889 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| F4V39_RS18735 () | 3680936..3681277 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3681272..3681348 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| F4V39_RS18740 () | 3681498..3683252 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| F4V39_RS18745 () | 3683252..3684721 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| F4V39_RS18750 () | 3684788..3687220 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| F4V39_RS18755 () | 3687498..3687782 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| F4V39_RS18760 () | 3687791..3689149 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| F4V39_RS18765 () | 3689218..3690174 | - | 957 | WP_001297640.1 | GTPase | - |
| F4V39_RS18770 () | 3690185..3690388 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| F4V39_RS18775 () | 3690438..3692588 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| F4V39_RS18780 () | 3692881..3693423 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |