MGE detailed information
MGE type: Prophage MGE length: 46580 bp
Accession: NZ_CP044145 Location: 1959311..2005890 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Accession: NZ_CP044145 Location: 1959311..2005890 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS10540 () | 1954929..1956042 | + | 1114 | Protein_1984 | porin OmpN | - |
| F4V40_RS10545 () | 1956183..1956617 | + | 435 | WP_001295593.1 | universal stress protein UspF | - |
| F4V40_RS10550 () | 1957198..1957839 | - | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| F4V40_RS10555 () | 1957921..1958550 | - | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| F4V40_RS10560 () | 1958623..1959198 | - | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| F4V40_RS10565 () | 1959311..1959580 | - | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V40_RS10570 () | 1959582..1960895 | - | 1314 | WP_000268955.1 | ISNCY family transposase KIS | Transposase |
| F4V40_RS10575 () | 1960960..1961559 | - | 600 | WP_001230550.1 | hypothetical protein | VF |
| F4V40_RS10580 () | 1961630..1965127 | - | 3498 | WP_000515042.1 | host specificity protein J | - |
| F4V40_RS10585 () | 1965261..1965788 | + | 528 | WP_000649829.1 | hypothetical protein | VF |
| F4V40_RS10595 () | 1965979..1966611 | - | 633 | WP_064732755.1 | tail assembly protein | - |
| F4V40_RS10600 () | 1966557..1967300 | - | 744 | WP_000194763.1 | C40 family peptidase | - |
| F4V40_RS10605 () | 1967311..1968009 | - | 699 | WP_001152159.1 | phage minor tail protein L | - |
| F4V40_RS10610 () | 1968009..1968350 | - | 342 | WP_000807964.1 | phage tail protein | - |
| F4V40_RS10615 () | 1968343..1971423 | - | 3081 | WP_151098643.1 | phage tail tape measure protein | - |
| F4V40_RS10620 () | 1971476..1971685 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| F4V40_RS10625 () | 1971781..1972155 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| F4V40_RS10630 () | 1972161..1972877 | - | 717 | WP_001275500.1 | tail protein | - |
| F4V40_RS10635 () | 1972945..1973289 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| F4V40_RS10640 () | 1973286..1973732 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| F4V40_RS10645 () | 1973729..1974079 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| F4V40_RS10650 () | 1974089..1974415 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| F4V40_RS10655 () | 1974418..1976997 | - | 2580 | WP_001304108.1 | phage portal protein | - |
| F4V40_RS10660 () | 1976943..1977164 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| F4V40_RS10665 () | 1977209..1979146 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| F4V40_RS10670 () | 1979210..1980871 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| F4V40_RS10675 () | 1980868..1981431 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| F4V40_RS10685 () | 1981720..1982085 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| F4V40_RS10690 () | 1982127..1982354 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| F4V40_RS10695 () | 1982779..1982964 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| F4V40_RS10705 () | 1983192..1983338 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| F4V40_RS10710 () | 1983338..1983907 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| F4V40_RS10715 () | 1984178..1984711 | - | 534 | WP_000992137.1 | lysozyme | - |
| F4V40_RS10720 () | 1984762..1985106 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| F4V40_RS10725 () | 1985111..1985326 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| F4V40_RS10730 () | 1985766..1987616 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| F4V40_RS10735 () | 1987843..1988098 | - | 256 | Protein_2020 | DUF3927 family protein | - |
| F4V40_RS10740 () | 1988095..1988523 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| F4V40_RS10765 () | 1989163..1989852 | - | 690 | WP_001059381.1 | antiterminator | - |
| F4V40_RS10770 () | 1989849..1990208 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V40_RS10775 () | 1990221..1991270 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| F4V40_RS10780 () | 1991272..1991550 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| F4V40_RS10785 () | 1991718..1991873 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| F4V40_RS10790 () | 1992119..1992223 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| F4V40_RS10795 () | 1992339..1992923 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| F4V40_RS10800 () | 1992980..1993375 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| F4V40_RS10805 () | 1993391..1994160 | - | 770 | Protein_2030 | DUF1627 domain-containing protein | - |
| F4V40_RS10810 () | 1994186..1994926 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| F4V40_RS10815 () | 1994933..1995895 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| F4V40_RS10820 () | 1995918..1996343 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| F4V40_RS10825 () | 1996340..1996642 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| F4V40_RS10830 () | 1996740..1997111 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| F4V40_RS10835 () | 1997132..1997323 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| F4V40_RS10840 () | 1997325..1997603 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F4V40_RS10845 () | 1997956..1998255 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| F4V40_RS10850 () | 1998327..1998545 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| F4V40_RS10860 () | 1999114..1999302 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| F4V40_RS10865 () | 1999299..1999490 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| F4V40_RS10870 () | 1999583..2002054 | + | 2472 | WP_000048458.1 | exonuclease | - |
| F4V40_RS10875 () | 2002127..2002378 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| F4V40_RS10880 () | 2002413..2002597 | + | 185 | Protein_2044 | DUF3596 domain-containing protein | - |
| F4V40_RS10890 () | 2003367..2003693 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| F4V40_RS10895 () | 2003828..2004169 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| F4V40_RS10900 () | 2004204..2004764 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| F4V40_RS10905 () | 2004767..2005477 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| F4V40_RS10910 () | 2005585..2005890 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| F4V40_RS10915 () | 2006089..2008515 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|