MGE detailed information
MGE type: Prophage MGE length: 124326 bp
Accession: NZ_CP044145 Location: 1655001..1779326 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Accession: NZ_CP044145 Location: 1655001..1779326 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS08920 () | 1650844..1651875 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| F4V40_RS08925 () | 1652119..1652376 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| F4V40_RS08930 () | 1652426..1653376 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| F4V40_RS08935 () | 1653528..1654280 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| F4V40_RS08940 () | 1654475..1654990 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| F4V40_RS08945 () | 1655001..1655762 | - | 762 | Protein_1676 | AbgT family transporter | - |
| F4V40_RS08955 () | 1657073..1657840 | - | 768 | Protein_1678 | AbgT family transporter | - |
| F4V40_RS08960 () | 1657877..1659322 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| F4V40_RS08965 () | 1659322..1660632 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| F4V40_RS08970 () | 1660808..1661716 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| F4V40_RS08975 () | 1662046..1662609 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| F4V40_RS08980 () | 1662630..1663862 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| F4V40_RS29580 () | 1664056..1664103 | + | 48 | WP_211180494.1 | protein YnaN | - |
| F4V40_RS08985 () | 1664117..1665100 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| F4V40_RS29395 () | 1665375..1665545 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| F4V40_RS08995 () | 1665578..1666951 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| F4V40_RS09000 () | 1667080..1668015 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| F4V40_RS09005 () | 1668067..1669302 | - | 1236 | WP_000040839.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| F4V40_RS09010 () | 1669304..1669519 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| F4V40_RS09015 () | 1669619..1669807 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1669623..1669801 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1669623..1669801 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1669623..1669801 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1669623..1669801 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| F4V40_RS09020 () | 1669845..1669994 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| F4V40_RS09025 () | 1670050..1670859 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| F4V40_RS09030 () | 1670852..1673452 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| F4V40_RS09035 () | 1673554..1673829 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| F4V40_RS09040 () | 1673904..1674074 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| F4V40_RS09045 () | 1674074..1674295 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| F4V40_RS09050 () | 1674737..1675225 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| F4V40_RS09055 () | 1675222..1675377 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| F4V40_RS09060 () | 1675388..1675567 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| F4V40_RS09070 () | 1675810..1676229 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| F4V40_RS09075 () | 1676309..1676563 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| F4V40_RS09080 () | 1676560..1676982 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| F4V40_RS09085 () | 1677060..1677848 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| F4V40_RS09090 () | 1677855..1678601 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| F4V40_RS09095 () | 1678624..1679385 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| F4V40_RS09100 () | 1679401..1679823 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| F4V40_RS09105 () | 1679929..1680141 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| F4V40_RS09110 () | 1680174..1680391 | + | 218 | Protein_1709 | DUF4014 family protein | - |
| F4V40_RS09115 () | 1680393..1680656 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| F4V40_RS09120 () | 1680667..1680828 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| F4V40_RS09125 () | 1680907..1681152 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| F4V40_RS09130 () | 1681584..1682735 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| F4V40_RS09135 () | 1682703..1683692 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| F4V40_RS09140 () | 1683692..1685083 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| F4V40_RS09145 () | 1685583..1686182 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| F4V40_RS09150 () | 1686182..1686472 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| F4V40_RS09155 () | 1686469..1687023 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| F4V40_RS09170 () | 1687585..1688016 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| F4V40_RS09175 () | 1688013..1688268 | + | 256 | Protein_1720 | DUF3927 family protein | - |
| F4V40_RS09180 () | 1688591..1690444 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| F4V40_RS09185 () | 1690594..1690809 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| F4V40_RS09190 () | 1690814..1691158 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| F4V40_RS09195 () | 1691209..1691742 | + | 534 | WP_000992086.1 | lysozyme | - |
| F4V40_RS09200 () | 1692016..1692711 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| F4V40_RS09205 () | 1692806..1692937 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| F4V40_RS09215 () | 1693160..1693345 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| F4V40_RS09230 () | 1693746..1694072 | + | 327 | WP_000828070.1 | TonB family protein | - |
| F4V40_RS09235 () | 1694204..1694404 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| F4V40_RS09240 () | 1694446..1694811 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| F4V40_RS09245 () | 1695100..1695663 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| F4V40_RS09250 () | 1695660..1697321 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| F4V40_RS09255 () | 1697385..1699322 | + | 1938 | WP_000173010.1 | phage major capsid protein | - |
| F4V40_RS09260 () | 1699367..1699588 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| F4V40_RS09265 () | 1699534..1702118 | + | 2585 | Protein_1735 | phage portal protein | - |
| F4V40_RS09270 () | 1702115..1702441 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| F4V40_RS09275 () | 1702451..1702801 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| F4V40_RS09280 () | 1702798..1703244 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| F4V40_RS09285 () | 1703241..1703585 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| F4V40_RS09290 () | 1703654..1704370 | + | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| F4V40_RS09295 () | 1704376..1704750 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| F4V40_RS09300 () | 1704846..1705055 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| F4V40_RS09305 () | 1705107..1708187 | + | 3081 | WP_151098642.1 | phage tail tape measure protein | - |
| F4V40_RS09310 () | 1708180..1708521 | + | 342 | WP_000807954.1 | phage tail protein | - |
| F4V40_RS09315 () | 1708521..1708958 | + | 438 | WP_001152128.1 | phage minor tail protein L | - |
| F4V40_RS09320 () | 1709146..1712622 | + | 3477 | WP_000514792.1 | host specificity protein J | - |
| F4V40_RS09325 () | 1712690..1713289 | + | 600 | WP_001228304.1 | hypothetical protein | VF |
| F4V40_RS09330 () | 1713441..1714754 | + | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| F4V40_RS09335 () | 1714756..1715025 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V40_RS09340 () | 1715138..1715712 | + | 575 | Protein_1750 | hypothetical protein | VF |
| F4V40_RS09345 () | 1716052..1717377 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| F4V40_RS09355 () | 1718038..1718952 | - | 915 | Protein_1752 | Tyrosine recombinase XerD ; Integrase | Integrase |
| F4V40_RS09360 () | 1718975..1719097 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V40_RS09365 () | 1719204..1720115 | + | 912 | WP_000950979.1 | hypothetical protein | VF |
| F4V40_RS09370 () | 1720181..1720750 | + | 570 | WP_000938103.1 | hypothetical protein | VF |
| F4V40_RS09375 () | 1720797..1721431 | - | 635 | Protein_1756 | IS256 family transposase ISEic2 | Transposase |
| F4V40_RS09380 () | 1721716..1723254 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| F4V40_RS09385 () | 1723304..1723651 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| F4V40_RS09390 () | 1723648..1724028 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| F4V40_RS09395 () | 1724123..1724941 | + | 819 | Protein_1760 | IS256 family transposase IS1414 | Transposase |
| F4V40_RS09400 () | 1724991..1725233 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| F4V40_RS09405 () | 1725411..1725962 | - | 552 | Protein_1762 | hypothetical protein ; Integrase | Integrase |
| F4V40_RS09410 () | 1725950..1727188 | - | 1239 | Protein_1763 | exonuclease | - |
| F4V40_RS09415 () | 1727281..1727469 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| F4V40_RS09420 () | 1727466..1727654 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| F4V40_RS09430 () | 1728219..1728428 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| F4V40_RS09435 () | 1728429..1729067 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| F4V40_RS09440 () | 1729079..1729231 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| F4V40_RS09445 () | 1729524..1729862 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| F4V40_RS09450 () | 1730254..1730496 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| F4V40_RS09455 () | 1730480..1730905 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| F4V40_RS09460 () | 1730974..1732017 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| F4V40_RS09465 () | 1732010..1732471 | + | 462 | WP_000139447.1 | replication protein | - |
| F4V40_RS09470 () | 1732505..1733221 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| F4V40_RS09475 () | 1733254..1733535 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| F4V40_RS09480 () | 1733532..1733759 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| F4V40_RS09485 () | 1733752..1734063 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| F4V40_RS09490 () | 1734191..1734409 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| F4V40_RS09495 () | 1734411..1734968 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| F4V40_RS09500 () | 1735259..1735414 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| F4V40_RS09505 () | 1735534..1735878 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| F4V40_RS09510 () | 1736000..1736272 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| F4V40_RS09515 () | 1736274..1737323 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| F4V40_RS09520 () | 1737336..1737641 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V40_RS09525 () | 1737704..1738258 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| F4V40_RS09530 () | 1738483..1738680 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| F4V40_RS09535 () | 1738815..1739528 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| F4V40_RS09550 () | 1739979..1740410 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| F4V40_RS09555 () | 1740407..1740662 | + | 256 | Protein_1789 | DUF3927 family protein | - |
| F4V40_RS09560 () | 1740888..1742738 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| F4V40_RS09565 () | 1743177..1743392 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| F4V40_RS09570 () | 1743397..1743741 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| F4V40_RS09575 () | 1743792..1744325 | + | 534 | WP_000992137.1 | lysozyme | - |
| F4V40_RS09580 () | 1744596..1745165 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| F4V40_RS09585 () | 1745165..1745311 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| F4V40_RS09590 () | 1745534..1745719 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| F4V40_RS09595 () | 1746245..1746559 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| F4V40_RS09600 () | 1746641..1746865 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| F4V40_RS09610 () | 1747252..1747797 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| F4V40_RS09615 () | 1747772..1749697 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| F4V40_RS09620 () | 1749694..1749900 | + | 207 | WP_000198153.1 | gpW family protein | - |
| F4V40_RS09625 () | 1749897..1751498 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| F4V40_RS09630 () | 1751479..1752798 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| F4V40_RS09635 () | 1752808..1753140 | + | 333 | WP_001295978.1 | head decoration protein | - |
| F4V40_RS09640 () | 1753196..1754221 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| F4V40_RS09645 () | 1754263..1754661 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| F4V40_RS09650 () | 1754673..1755026 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| F4V40_RS09655 () | 1755041..1755574 | + | 534 | WP_000975020.1 | phage tail protein | - |
| F4V40_RS09660 () | 1755571..1755966 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| F4V40_RS09665 () | 1755974..1756726 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| F4V40_RS09670 () | 1756740..1757162 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| F4V40_RS09675 () | 1757189..1757602 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| F4V40_RS09680 () | 1757583..1760195 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| F4V40_RS09685 () | 1760192..1760521 | + | 330 | WP_000847298.1 | phage tail protein | - |
| F4V40_RS09690 () | 1760521..1761219 | + | 699 | WP_089158661.1 | phage minor tail protein L | - |
| F4V40_RS09695 () | 1761230..1761973 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| F4V40_RS09700 () | 1761919..1762548 | + | 630 | WP_127446151.1 | tail assembly protein | - |
| F4V40_RS09705 () | 1762789..1763964 | + | 1176 | WP_001413764.1 | host specificity protein J | - |
| F4V40_RS09710 () | 1763916..1766267 | + | 2352 | WP_115801853.1 | host specificity protein J | - |
| F4V40_RS09715 () | 1766335..1766934 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| F4V40_RS09720 () | 1766999..1768222 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| F4V40_RS09725 () | 1768224..1768493 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V40_RS09730 () | 1768608..1769183 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| F4V40_RS09735 () | 1769256..1769885 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| F4V40_RS09740 () | 1769967..1770608 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| F4V40_RS09750 () | 1770770..1771012 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| F4V40_RS09755 () | 1771144..1772427 | + | 1284 | Protein_1827 | MHS family MFS transporter YdfJ | - |
| F4V40_RS09760 () | 1772516..1773976 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| F4V40_RS09765 () | 1774012..1774215 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| F4V40_RS09770 () | 1774392..1775078 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| F4V40_RS09775 () | 1775167..1775913 | - | 747 | WP_000636568.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| F4V40_RS09780 () | 1776050..1778095 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| F4V40_RS09785 () | 1778140..1778658 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| F4V40_RS09790 () | 1778934..1779326 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| F4V40_RS09795 () | 1779581..1780471 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| F4V40_RS29585 () | 1780586..1780690 | - | 105 | WP_211180496.1 | protein MgtT | - |
| F4V40_RS09800 () | 1780690..1780785 | - | 96 | WP_000901365.1 | protein MgtS | - |
| F4V40_RS09805 () | 1780893..1781864 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| F4V40_RS09810 () | 1781959..1782354 | + | 396 | WP_001271101.1 | rhodanese | - |
| F4V40_RS09815 () | 1782395..1783582 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|